Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.6e-178 629.4 338 100.0
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 1.6e-69 267.3 311 48.6
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 6.0e-69 265.4 253 55.7
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 7.9e-69 265.0 241 57.3
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.3e-68 264.2 243 59.3
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.3e-68 263.5 243 58.8
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.3e-68 263.5 243 57.2
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.9e-68 262.7 244 56.6
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.1e-68 262.3 244 57.8
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 6.7e-68 261.9 243 57.2
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 6.7e-68 261.9 251 54.6
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.5e-67 260.8 243 57.2
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 1.9e-67 260.4 256 55.9
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 1.9e-67 260.4 244 56.1
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.9e-67 260.4 244 56.1
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.5e-67 260.0 244 55.7
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.5e-67 260.0 246 55.7
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.5e-67 260.0 246 55.7
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 3.3e-67 259.6 246 56.1
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 3.3e-67 259.6 244 55.7
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 4.3e-67 259.2 242 57.0
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 7.4e-67 258.5 246 55.3
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 7.4e-67 258.5 244 55.7
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 7.4e-67 258.5 243 56.4
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 9.6e-67 258.1 244 57.0
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-66 257.7 244 54.9
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.3e-66 257.7 244 55.7
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.6e-66 257.3 256 54.7
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 2.1e-66 256.9 243 56.0
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 3.7e-66 256.1 249 55.8
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 3.7e-66 256.1 243 56.0
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 4.8e-66 255.8 254 53.5
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 6.2e-66 255.4 243 56.0
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 6.2e-66 255.4 243 54.3
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 8.2e-66 255.0 250 56.0
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 8.2e-66 255.0 242 55.8
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 8.2e-66 255.0 259 53.3
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.1e-65 254.6 256 53.9
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 1.4e-65 254.2 247 54.7
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.8e-65 253.8 261 51.7
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 2.4e-65 253.4 241 55.6
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 2.4e-65 253.4 244 54.5
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 3.1e-65 253.1 244 54.1
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 3.1e-65 253.1 244 54.1
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.0e-65 252.7 271 53.1
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 4.0e-65 252.7 248 54.4
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.0e-65 252.7 243 56.4
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 5.3e-65 252.3 243 53.9
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 5.3e-65 252.3 256 55.1
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 5.3e-65 252.3 244 54.5
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 5.3e-65 252.3 259 53.3
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 6.9e-65 251.9 243 56.4
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 6.9e-65 251.9 243 56.8
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 6.9e-65 251.9 243 54.7
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 9.0e-65 251.5 243 55.1
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 9.0e-65 251.5 243 53.9
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 9.0e-65 251.5 243 55.6
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 9.0e-65 251.5 244 54.9
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.5e-64 250.8 243 55.1
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.5e-64 250.8 243 54.7
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 2.0e-64 250.4 244 53.7
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 2.0e-64 250.4 241 55.2
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 2.0e-64 250.4 244 54.1
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 2.6e-64 250.0 252 52.0
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.6e-64 250.0 264 53.8
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 3.4e-64 249.6 244 54.1
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 4.5e-64 249.2 243 54.3
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 4.5e-64 249.2 243 54.3
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 4.5e-64 249.2 241 53.9
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 4.5e-64 249.2 246 53.7
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 4.5e-64 249.2 245 55.1
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 4.5e-64 249.2 243 53.9
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 5.8e-64 248.8 241 54.8
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 7.6e-64 248.4 243 53.5
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-63 248.1 243 53.9
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 1.0e-63 248.1 246 53.7
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.0e-63 248.1 246 53.7
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.0e-63 248.1 241 55.2
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.0e-63 248.1 242 54.1
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 1.7e-63 247.3 243 54.3
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.2e-63 246.9 241 56.0
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 2.9e-63 246.5 242 55.4
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.8e-63 246.1 244 53.7
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.8e-63 246.1 244 53.7
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 1.1e-62 244.6 242 53.3
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 1.1e-62 244.6 243 53.5
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 1.1e-62 244.6 244 51.6
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 1.4e-62 244.2 246 52.0
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.4e-62 244.2 241 55.2
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 2.5e-62 243.4 243 52.3
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 4.2e-62 242.7 266 52.3
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 4.2e-62 242.7 243 53.5
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 9.3e-62 241.5 244 53.7
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 9.3e-62 241.5 242 53.3
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 4.6e-61 239.2 258 52.3
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 4.3e-59 232.6 262 50.0
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 7.4e-59 231.9 245 53.1
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 4.8e-58 229.2 294 46.3
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 4.8e-58 229.2 247 52.2
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.8e-57 227.3 226 54.4
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 6.9e-57 225.3 232 50.9
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 2.6e-56 223.4 242 52.9
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 4.5e-56 222.6 241 51.9
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.3e-55 221.1 244 50.8
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 2.5e-54 216.9 240 50.4
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.2e-54 216.1 162 67.9
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 4.2e-54 216.1 177 62.1
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 5.5e-54 215.7 162 67.3
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.9e-46 190.7 261 44.1
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 1.2e-45 188.0 195 53.3
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.0e-44 184.9 171 56.7
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 1.5e-43 181.0 195 49.2
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.5e-43 181.0 213 51.6
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 9.7e-43 178.3 181 53.6
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 2.2e-42 177.2 165 58.8
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.5e-40 171.0 173 53.8
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 3.6e-37 159.8 113 66.4
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 6.7e-36 155.6 260 38.5
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.0e-35 154.1 213 45.5
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 2.8e-34 150.2 118 61.9
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 4.5e-32 142.9 245 39.2
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 3.0e-28 130.2 101 63.4
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 1.6e-21 107.8 138 46.4
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 3.6e-21 106.7 63 74.6
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.8e-20 104.4 131 48.1
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 2.2e-18 97.4 130 44.6
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 6.3e-18 95.9 141 44.0
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 8.3e-18 95.5 74 66.2
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 2.0e-16 90.9 53 75.5
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 1.0e-15 88.6 69 60.9
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 9.8e-11 72.0 76 50.0
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.3e-07 61.6 37 70.3
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 6.6e-07 59.3 33 75.8
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 8.6e-07 58.9 36 69.4
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-06 58.5 58 51.7
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.5e-06 58.2 40 62.5


User provided reference genes

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