Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 9.5e-41 169.9 93 100.0
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 8.0e-40 166.8 92 97.8
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 8.9e-23 110.2 91 67.0
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.2e-22 109.8 91 61.5
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 4.4e-22 107.8 91 63.7
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 5.8e-22 107.5 90 64.4
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 1.7e-21 105.9 84 65.5
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.2e-21 105.5 90 63.3
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 2.2e-21 105.5 89 61.8
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 2.2e-21 105.5 90 65.6
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 2.2e-21 105.5 90 65.6
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.9e-21 105.1 89 60.7
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.9e-21 105.1 90 66.7
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 3.7e-21 104.8 79 69.6
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 3.7e-21 104.8 81 67.9
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 3.7e-21 104.8 90 65.6
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 4.9e-21 104.4 80 68.8
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 6.4e-21 104.0 89 60.7
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 6.4e-21 104.0 89 60.7
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 8.4e-21 103.6 80 67.5
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 8.4e-21 103.6 90 62.2
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.1e-20 103.2 91 61.5
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.1e-20 103.2 92 63.0
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 1.9e-20 102.4 89 59.6
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 1.9e-20 102.4 90 63.3
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 2.4e-20 102.1 89 58.4
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 5.4e-20 100.9 81 63.0
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 5.4e-20 100.9 81 63.0
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 5.4e-20 100.9 87 58.6
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 5.4e-20 100.9 90 62.2
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.4e-20 100.9 90 61.1
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 5.4e-20 100.9 91 59.3
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 7.1e-20 100.5 89 58.4
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 9.2e-20 100.1 90 60.0
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.2e-19 99.8 90 60.0
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.2e-19 99.8 84 64.3
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.2e-19 99.8 81 63.0
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 1.2e-19 99.8 89 61.8
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.6e-19 99.4 89 57.3
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.6e-19 99.4 84 60.7
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.6e-19 99.4 89 57.3
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 1.6e-19 99.4 89 57.3
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.6e-19 99.4 89 58.4
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 2.1e-19 99.0 90 58.9
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 2.1e-19 99.0 83 61.4
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 2.1e-19 99.0 89 58.4
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 2.1e-19 99.0 81 63.0
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 2.7e-19 98.6 89 57.3
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 2.7e-19 98.6 79 62.0
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 3.5e-19 98.2 90 64.4
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 3.5e-19 98.2 90 60.0
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 3.5e-19 98.2 80 67.5
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 4.6e-19 97.8 89 56.2
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 4.6e-19 97.8 89 58.4
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 4.6e-19 97.8 79 62.0
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 6.0e-19 97.4 79 63.3
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 6.0e-19 97.4 89 56.2
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 6.0e-19 97.4 89 56.2
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 6.0e-19 97.4 89 56.2
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 6.0e-19 97.4 88 60.2
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 7.8e-19 97.1 80 63.8
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 7.8e-19 97.1 80 67.5
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 7.8e-19 97.1 80 65.0
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 7.8e-19 97.1 90 58.9
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.0e-18 96.7 87 56.3
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.0e-18 96.7 90 61.1
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 56.7
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 56.7
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 56.7
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 56.7
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 56.7
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 57.8
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.3e-18 96.3 90 57.8
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 1.3e-18 96.3 84 59.5
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.7e-18 95.9 89 58.4
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.7e-18 95.9 80 66.2
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.7e-18 95.9 90 57.8
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.3e-18 95.5 90 60.0
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 2.3e-18 95.5 83 60.2
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 3.0e-18 95.1 80 62.5
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 5.1e-18 94.4 80 60.0
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 6.6e-18 94.0 90 60.0
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 6.6e-18 94.0 89 56.2
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 6.6e-18 94.0 90 56.7
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 6.6e-18 94.0 81 58.0
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 6.6e-18 94.0 81 58.0
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 8.6e-18 93.6 78 61.5
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.1e-17 93.2 89 53.9
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.5e-17 92.8 90 54.4
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.5e-17 92.8 90 53.3
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.5e-17 92.8 89 58.4
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.9e-17 92.4 81 56.8
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.9e-17 92.4 81 56.8
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 1.9e-17 92.4 109 52.3
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.5e-17 92.0 83 59.0
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 3.3e-17 91.7 90 55.6
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.3e-17 91.7 93 52.7
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 3.3e-17 91.7 87 58.6
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 3.3e-17 91.7 82 58.5
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 4.3e-17 91.3 90 55.6
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 4.3e-17 91.3 90 55.6
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 5.6e-17 90.9 83 57.8
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 5.6e-17 90.9 81 58.0
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 5.6e-17 90.9 81 54.3
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 9.6e-17 90.1 67 70.1
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 6.2e-16 87.4 67 67.2
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 8.1e-16 87.0 78 62.8
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 1.1e-15 86.7 67 65.7
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 1.4e-15 86.3 77 58.4
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 1.4e-15 86.3 74 58.1
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 6.8e-15 84.0 76 59.2
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.5e-14 82.8 59 67.8
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 2.0e-14 82.4 100 49.0
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.0e-14 82.4 86 53.5
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 2.6e-14 82.0 100 48.0
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 4.4e-14 81.3 118 43.2
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.7e-13 79.3 74 59.5
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 3.8e-13 78.2 64 62.5
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 9.3e-12 73.6 67 56.7
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 2.7e-11 72.0 80 53.8
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.0e-10 70.1 63 60.3
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 3.9e-10 68.2 111 45.0
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 5.1e-10 67.8 72 48.6
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.1e-07 60.1 93 46.2


User provided reference genes

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