Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 4.3e-181 637.9 324 100.0
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 3.3e-64 249.6 190 62.6
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 7.3e-64 248.4 189 65.1
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 9.6e-64 248.1 163 71.2
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 9.6e-64 248.1 178 66.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 2.8e-63 246.5 173 67.1
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 4.7e-63 245.7 176 66.5
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 6.2e-63 245.4 176 66.5
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 6.2e-63 245.4 176 66.5
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 6.2e-63 245.4 176 66.5
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 8.1e-63 245.0 175 66.3
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 8.1e-63 245.0 173 68.2
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.1e-62 244.6 175 66.3
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.1e-62 244.6 175 66.3
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.1e-62 244.6 186 65.1
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.4e-62 244.2 172 68.0
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.4e-62 244.2 175 65.1
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.8e-62 243.8 176 65.9
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 1.8e-62 243.8 177 66.7
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 2.4e-62 243.4 191 62.8
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 5.2e-62 242.3 185 62.2
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 6.8e-62 241.9 170 67.6
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 6.8e-62 241.9 192 62.0
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 8.9e-62 241.5 173 67.1
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.2e-61 241.1 191 62.3
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.5e-61 240.7 163 70.6
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 2.0e-61 240.4 193 60.6
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.6e-61 240.0 173 65.9
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 2.6e-61 240.0 173 65.9
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 2.6e-61 240.0 174 65.5
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 3.4e-61 239.6 170 67.6
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 3.4e-61 239.6 176 67.0
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 4.4e-61 239.2 165 68.5
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 4.4e-61 239.2 193 63.2
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 4.4e-61 239.2 174 65.5
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 4.4e-61 239.2 192 60.4
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 5.8e-61 238.8 175 65.7
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 5.8e-61 238.8 173 65.9
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 5.8e-61 238.8 190 62.1
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 5.8e-61 238.8 189 61.4
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 5.8e-61 238.8 189 61.4
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 7.6e-61 238.4 173 65.9
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 7.6e-61 238.4 174 63.2
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 9.9e-61 238.0 163 69.3
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 9.9e-61 238.0 170 65.9
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 9.9e-61 238.0 186 62.9
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.3e-60 237.7 177 64.4
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.7e-60 237.3 171 66.1
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 1.7e-60 237.3 182 63.2
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.2e-60 236.9 173 65.3
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 2.2e-60 236.9 174 64.9
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 2.9e-60 236.5 163 65.6
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 2.9e-60 236.5 184 62.5
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.9e-60 236.5 163 68.7
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 3.8e-60 236.1 173 64.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.8e-60 236.1 175 64.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 6.4e-60 235.3 170 65.9
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 6.4e-60 235.3 174 64.9
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.1e-59 234.6 174 64.4
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.1e-59 234.6 166 68.7
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.1e-59 234.6 193 58.5
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 1.4e-59 234.2 163 68.1
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.4e-59 234.2 189 60.8
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.4e-59 234.2 174 63.2
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.4e-59 234.2 170 64.7
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.9e-59 233.8 174 64.9
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 2.4e-59 233.4 162 68.5
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.4e-59 233.4 163 66.9
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 3.2e-59 233.0 175 61.7
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 4.2e-59 232.6 173 64.2
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 7.1e-59 231.9 162 67.3
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 9.3e-59 231.5 187 62.0
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 9.3e-59 231.5 174 63.8
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.2e-58 231.1 174 63.8
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.6e-58 230.7 188 60.1
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.6e-58 230.7 177 62.7
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 2.1e-58 230.3 163 68.1
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 2.1e-58 230.3 163 65.6
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 2.1e-58 230.3 177 59.3
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.7e-58 229.9 176 64.8
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 2.7e-58 229.9 176 64.8
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 2.7e-58 229.9 163 67.5
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 4.6e-58 229.2 170 65.3
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 4.6e-58 229.2 170 65.3
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 4.6e-58 229.2 218 55.0
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 1.7e-57 227.3 162 66.0
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.7e-57 227.3 169 65.1
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 5.1e-57 225.7 206 55.8
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 8.7e-57 224.9 170 65.9
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.3e-55 221.1 163 63.2
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 2.8e-55 219.9 174 61.5
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 5.8e-53 212.2 147 68.7
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 3.9e-49 199.5 132 69.7
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 6.6e-49 198.7 170 58.8
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.8e-46 190.7 179 57.5
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 5.3e-46 189.1 179 55.3
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 9.0e-46 188.3 180 54.4
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 5.8e-45 185.7 127 66.9
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.3e-44 184.5 170 54.7
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 3.2e-43 179.9 184 54.3
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.9e-40 170.6 184 49.5
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 1.6e-39 167.5 133 62.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.8e-38 164.1 233 47.6
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 3.1e-38 163.3 114 67.5
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 4.5e-37 159.5 177 46.9
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 7.6e-37 158.7 160 52.5
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 4.9e-36 156.0 113 65.5
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.5e-36 155.6 111 65.8
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 6.5e-36 155.6 113 63.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.9e-35 154.1 123 65.9
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 4.2e-35 152.9 109 67.0
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 3.9e-33 146.4 103 68.9
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 2.5e-32 143.7 107 63.6
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.9e-19 100.9 153 40.5
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.4e-14 84.0 59 66.1
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 7.7e-13 79.0 168 30.4
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 1.0e-12 78.6 171 28.7
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 5.0e-12 76.3 56 62.5
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 5.0e-12 76.3 187 28.9
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis HOM05D006649 ORTHO05D023509 9.7e-08 62.0 92 34.8
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.1e-06 58.5 75 41.3


User provided reference genes

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