Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g27900 Chara braunii HOM05D005229 ORTHO05D006378 2.1e-121 439.1 232 100.0
ATR1147G045 Amborella trichopoda HOM05D005229 ORTHO05D006378 2.0e-63 246.5 224 58.9
BcaB04g17739 Brassica carinata HOM05D005229 ORTHO05D006378 1.3e-62 243.8 219 61.6
AT4G12800 Arabidopsis thaliana HOM05D005229 ORTHO05D006378 4.9e-62 241.9 219 60.7
FAN02G4095 Fragaria x ananassa HOM05D005229 ORTHO05D006378 1.1e-61 240.7 215 60.5
Gorai.001G101200 Gossypium raimondii HOM05D005229 ORTHO05D006378 1.1e-61 240.7 218 58.3
Cpa.g.sc8.42 Carica papaya HOM05D005229 ORTHO05D006378 1.4e-61 240.4 218 58.7
FvH4_6g00530 Fragaria vesca HOM05D005229 ORTHO05D006378 1.4e-61 240.4 215 60.5
FAN09G4314 Fragaria x ananassa HOM05D005229 ORTHO05D006378 1.4e-61 240.4 215 60.5
AL9U11740 Arabidopsis lyrata HOM05D005229 ORTHO05D006378 2.4e-61 239.6 219 60.3
C08p09050 Brassica napus HOM05D005229 ORTHO05D006378 2.4e-61 239.6 219 60.7
COL.COLO4_07353 Corchorus olitorius HOM05D005229 ORTHO05D006378 2.4e-61 239.6 218 58.3
Atru.chr6.3527 Acer truncatum HOM05D005229 ORTHO05D006378 3.2e-61 239.2 218 59.2
BcaC07g37428 Brassica carinata HOM05D005229 ORTHO05D006378 3.2e-61 239.2 219 60.3
A08p07360 Brassica napus HOM05D005229 ORTHO05D006378 3.2e-61 239.2 219 60.7
BraA08t32752Z Brassica rapa HOM05D005229 ORTHO05D006378 3.2e-61 239.2 219 60.7
FAN14G1738 Fragaria x ananassa HOM05D005229 ORTHO05D006378 3.2e-61 239.2 214 59.8
RcHm_v2.0_Chr3g0447921 Rosa chinensis HOM05D005229 ORTHO05D006378 3.2e-61 239.2 214 59.8
FAN05G0704 Fragaria x ananassa HOM05D005229 ORTHO05D006378 4.1e-61 238.8 214 59.8
Sp7g09420 Schrenkiella parvula HOM05D005229 ORTHO05D006378 4.1e-61 238.8 218 60.1
CANSAT54G2118 Cannabis sativa HOM05D005229 ORTHO05D006378 5.4e-61 238.4 215 60.0
BolC8t47751H Brassica oleracea HOM05D005229 ORTHO05D006378 7.1e-61 238.0 219 60.7
Thhalv10026195m.g Eutrema salsugineum HOM05D005229 ORTHO05D006378 7.1e-61 238.0 219 60.3
Gohir.D07G168100 Gossypium hirsutum HOM05D005229 ORTHO05D006378 7.1e-61 238.0 218 57.8
Gorai.N002100 Gossypium raimondii HOM05D005229 ORTHO05D006378 9.2e-61 237.7 217 58.5
Gohir.A07G160500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 1.2e-60 237.3 218 57.8
Aa31LG9G5690 Aethionema arabicum HOM05D005229 ORTHO05D006378 2.1e-60 236.5 218 58.3
CARHR218150 Cardamine hirsuta HOM05D005229 ORTHO05D006378 2.1e-60 236.5 219 59.4
Gohir.A07G089500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 2.1e-60 236.5 215 57.7
Gohir.D07G094300 Gossypium hirsutum HOM05D005229 ORTHO05D006378 2.7e-60 236.1 215 58.1
Lalb_Chr01g0020361 Lupinus albus HOM05D005229 ORTHO05D006378 2.7e-60 236.1 183 67.2
Glyma.09G250800 Glycine max HOM05D005229 ORTHO05D006378 3.5e-60 235.7 188 64.9
SalBow3G3798 Salvia bowleyana HOM05D005229 ORTHO05D006378 3.5e-60 235.7 215 58.6
CDE06G2797 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 4.6e-60 235.3 219 57.5
Migut.D00776 Erythranthe guttata HOM05D005229 ORTHO05D006378 4.6e-60 235.3 209 59.3
BcaC02g09463 Brassica carinata HOM05D005229 ORTHO05D006378 6.0e-60 235.0 224 58.0
C04p43050 Brassica napus HOM05D005229 ORTHO05D006378 6.0e-60 235.0 224 58.0
BolC4t25883H Brassica oleracea HOM05D005229 ORTHO05D006378 6.0e-60 235.0 224 58.0
Mapoly0102s0025 Marchantia polymorpha HOM05D005229 ORTHO05D006378 6.0e-60 235.0 191 63.9
Sabra14G0134400 Salix brachista HOM05D005229 ORTHO05D006378 6.0e-60 235.0 218 57.3
DCAR_012704 Daucus carota HOM05D005229 ORTHO05D006378 7.8e-60 234.6 203 61.6
Manes.12G055600 Manihot esculenta HOM05D005229 ORTHO05D006378 7.8e-60 234.6 217 58.5
EL10Ac4g09972 Beta vulgaris HOM05D005229 ORTHO05D006378 1.0e-59 234.2 218 57.8
BcaB03g16154 Brassica carinata HOM05D005229 ORTHO05D006378 1.0e-59 234.2 218 59.6
A04p09140 Brassica napus HOM05D005229 ORTHO05D006378 1.0e-59 234.2 222 57.7
AUR62006659 Chenopodium quinoa HOM05D005229 ORTHO05D006378 1.0e-59 234.2 218 57.3
Nn1g09761 Nelumbo nucifera HOM05D005229 ORTHO05D006378 1.0e-59 234.2 215 58.1
Thecc.01G207800 Theobroma cacao HOM05D005229 ORTHO05D006378 1.0e-59 234.2 218 57.8
arahy.Tifrunner.gnm1.ann1.18YQBF Arachis hypogaea HOM05D005229 ORTHO05D006378 1.3e-59 233.8 188 64.4
arahy.Tifrunner.gnm1.ann1.MF538D Arachis hypogaea HOM05D005229 ORTHO05D006378 1.3e-59 233.8 188 64.4
AUR62000314 Chenopodium quinoa HOM05D005229 ORTHO05D006378 1.3e-59 233.8 218 57.3
Glyma.18G241700 Glycine max HOM05D005229 ORTHO05D006378 1.3e-59 233.8 188 64.4
THA.LOC104808816 Tarenaya hassleriana HOM05D005229 ORTHO05D006378 1.3e-59 233.8 219 58.4
MBI07_g06134_MAGBIO Magnolia biondii HOM05D005229 ORTHO05D006378 1.7e-59 233.4 196 61.7
PGR083G1330 Punica granatum HOM05D005229 ORTHO05D006378 1.7e-59 233.4 218 56.4
Ah.04g158950 Amaranthus hybridus HOM05D005229 ORTHO05D006378 2.3e-59 233.0 218 57.3
SGA_v2.0_scaffold29G12061 Striga asiatica HOM05D005229 ORTHO05D006378 2.3e-59 233.0 215 57.7
PSO017G0175 Papaver somniferum HOM05D005229 ORTHO05D006378 3.0e-59 232.6 217 56.7
PSO675G2116 Papaver somniferum HOM05D005229 ORTHO05D006378 3.0e-59 232.6 217 56.7
Thecc.05G199500 Theobroma cacao HOM05D005229 ORTHO05D006378 3.0e-59 232.6 215 57.2
Actinidia34531 Actinidia chinensis HOM05D005229 ORTHO05D006378 3.9e-59 232.3 215 58.1
Carub.0007s3001 Capsella rubella HOM05D005229 ORTHO05D006378 3.9e-59 232.3 219 58.4
Haze_04550 Corylus avellana HOM05D005229 ORTHO05D006378 3.9e-59 232.3 213 58.7
Duzib138G0242 Durio zibethinus HOM05D005229 ORTHO05D006378 3.9e-59 232.3 218 56.4
Lsat_1_v5_gn_9_16861 Lactuca sativa HOM05D005229 ORTHO05D006378 3.9e-59 232.3 191 61.8
DCAR_018610 Daucus carota HOM05D005229 ORTHO05D006378 5.1e-59 231.9 215 56.7
HanXRQChr08g0231801 Helianthus annuus HOM05D005229 ORTHO05D006378 5.1e-59 231.9 199 59.8
Lalb_Chr19g0127611 Lupinus albus HOM05D005229 ORTHO05D006378 6.6e-59 231.5 188 64.9
Oeu013526.1 Olea europaea HOM05D005229 ORTHO05D006378 6.6e-59 231.5 215 56.3
Pp3c5_4200 Physcomitrium patens HOM05D005229 ORTHO05D006378 6.6e-59 231.5 233 57.1
VMungo1383G0609 Vigna mungo HOM05D005229 ORTHO05D006378 6.6e-59 231.5 192 63.0
Cfa006268 Carpinus fangiana HOM05D005229 ORTHO05D006378 8.7e-59 231.1 213 58.2
ECA247G0242 Erigeron canadensis HOM05D005229 ORTHO05D006378 8.7e-59 231.1 201 58.7
Eucgr.K02362 Eucalyptus grandis HOM05D005229 ORTHO05D006378 8.7e-59 231.1 229 56.8
Lsat_1_v5_gn_8_98481 Lactuca sativa HOM05D005229 ORTHO05D006378 8.7e-59 231.1 191 61.3
Hund07343 Selenicereus undatus HOM05D005229 ORTHO05D006378 8.7e-59 231.1 178 65.2
MSTRG.12743 Avicennia marina HOM05D005229 ORTHO05D006378 1.1e-58 230.7 225 56.9
CsaV3_2G009680 Cucumis sativus L. HOM05D005229 ORTHO05D006378 1.1e-58 230.7 218 56.9
Rhsim01G0247800 Rhododendron simsii HOM05D005229 ORTHO05D006378 1.1e-58 230.7 223 56.1
GSVIVG01019114001 Vitis vinifera HOM05D005229 ORTHO05D006378 1.1e-58 230.7 218 57.8
Zm00001eb123000 Zea mays HOM05D005229 ORTHO05D006378 1.1e-58 230.7 180 66.7
ClCG11G010740 Citrullus lanatus HOM05D005229 ORTHO05D006378 1.5e-58 230.3 218 56.4
MELO3C008731.2 Cucumis melo HOM05D005229 ORTHO05D006378 1.5e-58 230.3 218 56.4
Lj1g0022024 Lotus japonicus HOM05D005229 ORTHO05D006378 1.5e-58 230.3 216 58.8
Os12g0420400 Oryza sativa ssp. japonica HOM05D005229 ORTHO05D006378 1.5e-58 230.3 178 66.9
QL01p048658 Quercus lobata HOM05D005229 ORTHO05D006378 1.5e-58 230.3 215 57.7
Sed0023204 Sechium edule HOM05D005229 ORTHO05D006378 1.5e-58 230.3 218 56.9
MSTRG.17960 Avicennia marina HOM05D005229 ORTHO05D006378 1.9e-58 229.9 209 56.9
Ciclev10016637m.g Citrus clementina HOM05D005229 ORTHO05D006378 1.9e-58 229.9 218 56.9
Cc01_g15890 Coffea canephora HOM05D005229 ORTHO05D006378 1.9e-58 229.9 215 56.7
Oeu025298.1 Olea europaea HOM05D005229 ORTHO05D006378 1.9e-58 229.9 215 55.8
TPR.G30351 Trifolium pratense HOM05D005229 ORTHO05D006378 1.9e-58 229.9 190 63.7
TAR365G0963 Trochodendron aralioides HOM05D005229 ORTHO05D006378 1.9e-58 229.9 215 57.2
CAN.G874.38 Capsicum annuum HOM05D005229 ORTHO05D006378 2.5e-58 229.6 227 56.4
ECA236G3288 Erigeron canadensis HOM05D005229 ORTHO05D006378 2.5e-58 229.6 207 56.5
TWI36G1337 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 2.5e-58 229.6 215 57.2
unitig_60.g25573 Utricularia gibba HOM05D005229 ORTHO05D006378 2.5e-58 229.6 209 58.4
Prupe.6G361000 Prunus persica HOM05D005229 ORTHO05D006378 3.3e-58 229.2 216 57.9
MD04G1244400 Malus domestica HOM05D005229 ORTHO05D006378 4.3e-58 228.8 215 55.8
Psat3g138440 Pisum sativum HOM05D005229 ORTHO05D006378 4.3e-58 228.8 190 62.1
MD12G1260300 Malus domestica HOM05D005229 ORTHO05D006378 5.6e-58 228.4 215 55.8
Solyc06g082940.3 Solanum lycopersicum HOM05D005229 ORTHO05D006378 5.6e-58 228.4 218 56.9
Aqoxy2G04070 Aquilegia oxysepala HOM05D005229 ORTHO05D006378 7.3e-58 228.0 218 58.7
CSS0044510 Camellia sinensis var. sinensis HOM05D005229 ORTHO05D006378 7.3e-58 228.0 217 57.1
TWI18G1321 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 7.3e-58 228.0 163 68.1
unitig_0.g420 Utricularia gibba HOM05D005229 ORTHO05D006378 7.3e-58 228.0 171 67.8
vmacro14690 Vaccinium macrocarpon HOM05D005229 ORTHO05D006378 7.3e-58 228.0 210 57.1
CAN.G874.39 Capsicum annuum HOM05D005229 ORTHO05D006378 9.6e-58 227.6 227 55.9
Ca_07979_v3 Cicer arietinum L. HOM05D005229 ORTHO05D006378 9.6e-58 227.6 170 66.5
Peaxi162Scf00841g00210 Petunia axillaris HOM05D005229 ORTHO05D006378 9.6e-58 227.6 216 57.4
Solyc06g082950.4 Solanum lycopersicum HOM05D005229 ORTHO05D006378 1.2e-57 227.3 225 56.9
Lj2P1112T20 Lonicera japonica HOM05D005229 ORTHO05D006378 1.6e-57 226.9 190 61.6
Medtr7g079900 Medicago truncatula HOM05D005229 ORTHO05D006378 1.6e-57 226.9 170 65.9
Sed0003052 Sechium edule HOM05D005229 ORTHO05D006378 1.6e-57 226.9 218 56.0
Potri.014G175600 Populus trichocarpa HOM05D005229 ORTHO05D006378 2.1e-57 226.5 218 55.0
CiPaw.07G079800 Carya illinoinensis HOM05D005229 ORTHO05D006378 2.8e-57 226.1 216 56.9
HanXRQChr12g0363961 Helianthus annuus HOM05D005229 ORTHO05D006378 2.8e-57 226.1 227 54.6
Potri.002G239700 Populus trichocarpa HOM05D005229 ORTHO05D006378 2.8e-57 226.1 218 54.6
Sopen06g034340 Solanum pennellii HOM05D005229 ORTHO05D006378 3.6e-57 225.7 227 56.4
PGSC0003DMG400027672 Solanum tuberosum HOM05D005229 ORTHO05D006378 3.6e-57 225.7 227 55.9
Zm00001eb336580 Zea mays HOM05D005229 ORTHO05D006378 6.2e-57 224.9 156 71.2
Sopen06g034330 Solanum pennellii HOM05D005229 ORTHO05D006378 8.1e-57 224.6 227 55.1
PGSC0003DMG400027671 Solanum tuberosum HOM05D005229 ORTHO05D006378 8.1e-57 224.6 227 55.9
AagrBONN_evm.TU.Sc2ySwM_362.2854 Anthoceros agrestis HOM05D005229 ORTHO05D006378 1.1e-56 224.2 231 57.6
Phvul.008G054400 Phaseolus vulgaris HOM05D005229 ORTHO05D006378 1.1e-56 224.2 229 53.3
Pp3c27_2310 Physcomitrium patens HOM05D005229 ORTHO05D006378 1.1e-56 224.2 209 57.4
Pp3c16_5670 Physcomitrium patens HOM05D005229 ORTHO05D006378 2.4e-56 223.0 228 56.6
Sabra02G0182500 Salix brachista HOM05D005229 ORTHO05D006378 4.0e-56 222.2 215 54.0
SEGI_02964 Sequoiadendron giganteum HOM05D005229 ORTHO05D006378 6.9e-56 221.5 230 55.2
Lj1P104T52 Lonicera japonica HOM05D005229 ORTHO05D006378 9.9e-55 217.6 156 68.6
PGR044G1943 Punica granatum HOM05D005229 ORTHO05D006378 1.2e-52 210.7 223 53.8
CDE06G0966 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 1.6e-52 210.3 198 57.6
Nitab4.5_0001348g0130 Nicotiana tabacum HOM05D005229 ORTHO05D006378 6.0e-52 208.4 156 66.7
MCO13G042 Micromonas commoda HOM05D005229 ORTHO05D006378 9.9e-47 191.0 225 50.7
Cre12.g486300 Chlamydomonas reinhardtii HOM05D005229 ORTHO05D006378 4.6e-44 182.2 166 56.6
PRCOL_00002830 Prasinoderma coloniale HOM05D005229 ORTHO05D006378 6.0e-44 181.8 150 60.7
Nitab4.5_0001348g0080 Nicotiana tabacum HOM05D005229 ORTHO05D006378 2.4e-32 143.3 223 41.3
Dinv28794 Davidia involucrata HOM05D005229 ORTHO05D006378 4.2e-29 132.5 176 47.2
Hma1.2p1_0171F.1_g075540 Hydrangea macrophylla HOM05D005229 ORTHO05D006378 1.9e-26 123.6 124 54.0
Actinidia23801 Actinidia chinensis HOM05D005229 ORTHO05D006378 5.3e-24 115.5 129 51.9
Peaxi162Scf01242g00025 Petunia axillaris HOM05D005229 ORTHO05D006378 6.1e-20 102.1 83 62.7
MD04G1204600 Malus domestica HOM05D000208 ORTHO05D000130 1.5e-10 70.9 105 41.9
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 9.7e-10 68.2 54 59.3
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 9.7e-10 68.2 54 59.3


User provided reference genes

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