Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 2.3e-106 390.2 190 100.0
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 1.1e-95 354.8 190 88.4
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 1.7e-93 347.4 190 86.3
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 3.0e-93 346.7 189 86.8
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 2.4e-90 337.0 189 83.6
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 5.3e-90 335.9 190 83.7
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 5.3e-90 335.9 190 83.2
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 6.9e-90 335.5 190 83.7
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 9.0e-90 335.1 190 82.6
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 1.2e-89 334.7 190 83.7
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 1.5e-89 334.3 190 83.2
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 1.5e-89 334.3 190 83.2
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 2.6e-89 333.6 190 82.6
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 2.6e-89 333.6 190 82.6
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 3.4e-89 333.2 190 83.2
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 3.4e-89 333.2 190 83.2
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 5.8e-89 332.4 190 81.1
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 5.8e-89 332.4 190 82.1
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 5.8e-89 332.4 190 82.6
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 7.6e-89 332.0 189 83.6
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 7.6e-89 332.0 189 83.6
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 7.6e-89 332.0 190 83.2
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 9.9e-89 331.6 190 81.6
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 1.3e-88 331.3 189 82.0
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 1.3e-88 331.3 190 82.1
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 1.3e-88 331.3 190 82.6
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 1.7e-88 330.9 190 81.1
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 1.7e-88 330.9 189 83.6
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 2.2e-88 330.5 190 81.1
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 2.9e-88 330.1 190 81.1
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 2.9e-88 330.1 190 82.1
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 2.9e-88 330.1 190 81.6
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 2.9e-88 330.1 190 81.6
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 3.8e-88 329.7 189 82.0
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 6.4e-88 328.9 190 81.6
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 6.4e-88 328.9 190 82.1
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 6.4e-88 328.9 190 81.6
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 6.4e-88 328.9 190 81.6
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 8.4e-88 328.6 190 82.1
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 8.4e-88 328.6 188 83.0
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 1.9e-87 327.4 189 82.0
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 1.9e-87 327.4 190 80.5
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 1.9e-87 327.4 190 80.0
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.9e-87 327.4 190 80.0
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 1.9e-87 327.4 190 81.1
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 2.4e-87 327.0 190 80.0
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 2.4e-87 327.0 188 81.9
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 2.4e-87 327.0 190 81.1
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 3.2e-87 326.6 190 80.5
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 4.2e-87 326.2 190 81.1
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 4.2e-87 326.2 190 79.5
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 4.2e-87 326.2 190 81.1
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 4.2e-87 326.2 190 81.6
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 5.4e-87 325.9 190 79.5
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 5.4e-87 325.9 190 79.5
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 5.4e-87 325.9 190 79.5
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 5.4e-87 325.9 190 79.5
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 5.4e-87 325.9 190 80.5
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 9.3e-87 325.1 190 81.1
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 9.3e-87 325.1 190 81.1
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 9.3e-87 325.1 190 80.5
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 1.6e-86 324.3 189 80.4
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 2.1e-86 323.9 190 79.5
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 2.7e-86 323.6 190 79.5
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 3.5e-86 323.2 189 79.9
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 4.6e-86 322.8 190 80.5
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 4.6e-86 322.8 190 80.5
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 4.6e-86 322.8 190 80.5
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 4.6e-86 322.8 190 79.5
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 4.6e-86 322.8 190 80.0
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 4.6e-86 322.8 190 80.0
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 6.0e-86 322.4 190 81.1
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 7.9e-86 322.0 190 78.9
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.0e-85 321.6 190 80.0
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 1.3e-85 321.2 190 80.5
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 1.3e-85 321.2 190 78.9
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.7e-85 320.9 190 80.0
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 3.0e-85 320.1 190 78.9
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 3.9e-85 319.7 189 78.3
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 3.9e-85 319.7 189 79.9
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 5.1e-85 319.3 190 78.4
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 5.1e-85 319.3 190 79.5
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.1e-84 318.2 190 77.4
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 3.3e-84 316.6 190 77.9
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 7.4e-84 315.5 204 73.5
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 9.6e-84 315.1 190 77.4
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.3e-83 314.7 190 76.8
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 1.6e-83 314.3 190 77.4
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 1.6e-83 314.3 190 76.8
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 1.6e-83 314.3 190 77.4
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 2.8e-83 313.5 190 76.8
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 1.1e-82 311.6 190 76.3
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 1.1e-82 311.6 190 76.3
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 1.1e-82 311.6 190 76.3
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 1.1e-82 311.6 190 76.3
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 2.4e-82 310.5 208 71.2
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 9.0e-82 308.5 190 77.9
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 2.6e-81 307.0 190 75.3
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 3.4e-81 306.6 239 64.9
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 7.6e-81 305.4 190 74.7
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 8.4e-80 302.0 167 83.8
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 1.1e-79 301.6 242 64.0
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 2.4e-79 300.4 213 68.5
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 3.2e-79 300.1 197 72.6
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 9.3e-79 298.5 190 75.3
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 3.5e-78 296.6 190 73.2
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 3.9e-77 293.1 266 58.6
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 3.9e-77 293.1 211 67.3
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.1e-76 291.6 167 80.8
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 3.3e-76 290.0 218 65.1
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.1e-74 285.0 208 69.2
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 4.0e-74 283.1 200 69.5
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 6.9e-74 282.3 190 66.3
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 7.6e-73 278.9 190 68.9
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 6.5e-72 275.8 190 73.7
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 1.9e-68 264.2 184 69.6
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 4.3e-68 263.1 155 79.4
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 4.6e-62 243.0 186 66.1
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 5.7e-60 236.1 185 60.0
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 1.8e-53 214.5 184 55.4
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 3.9e-53 213.4 192 54.2
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.7e-43 181.4 94 90.4
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 2.2e-43 181.0 97 86.6
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 6.1e-38 162.9 139 60.4
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 1.1e-34 152.1 95 75.8
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 1.1e-31 142.1 93 71.0
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.4e-29 135.2 90 74.4
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 2.2e-27 127.9 70 82.9
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 2.2e-27 127.9 70 82.9
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 1.1e-15 89.0 94 54.3
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 2.6e-12 77.8 57 63.2
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 7.5e-12 76.3 53 58.5
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 5.9e-09 66.6 69 53.6
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 8.6e-08 62.8 161 26.7
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 1.5e-07 62.0 42 66.7
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.9e-07 61.6 161 26.1


User provided reference genes

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