Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26524 Chara braunii HOM05D002705 ORTHO05D004955 9.0e-106 387.1 222 100.0
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-77 292.4 199 79.9
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 2.7e-09 66.6 95 41.1
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 7.9e-09 65.1 95 41.1
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 1.0e-08 64.7 109 37.6
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 1.0e-08 64.7 109 37.6
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 1.0e-08 64.7 95 41.1
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 1.3e-08 64.3 87 43.7
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 1.3e-08 64.3 86 41.9
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 1.8e-08 63.9 142 32.4
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 1.8e-08 63.9 86 44.2
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 1.8e-08 63.9 95 41.1
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 1.8e-08 63.9 95 41.1
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 1.8e-08 63.9 95 41.1
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 3.0e-08 63.2 82 42.7
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 3.0e-08 63.2 82 42.7
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 3.0e-08 63.2 86 43.0
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 3.0e-08 63.2 95 40.0
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 3.0e-08 63.2 95 40.0
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 3.9e-08 62.8 82 42.7
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 3.9e-08 62.8 82 42.7
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 3.9e-08 62.8 82 42.7
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 3.9e-08 62.8 142 31.7
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 3.9e-08 62.8 132 33.3
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 3.9e-08 62.8 95 41.1
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 5.1e-08 62.4 108 38.0
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 6.7e-08 62.0 95 40.0
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 6.7e-08 62.0 95 40.0
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 6.7e-08 62.0 108 38.0
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 8.7e-08 61.6 95 40.0
Cre07.g343333 Chlamydomonas reinhardtii HOM05D002705 ORTHO05D004955 8.7e-08 61.6 160 30.0
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 8.7e-08 61.6 87 43.7
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 1.1e-07 61.2 86 40.7
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 1.1e-07 61.2 86 40.7
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 1.5e-07 60.8 152 30.9
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 1.5e-07 60.8 95 38.9
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 1.5e-07 60.8 95 38.9
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 1.5e-07 60.8 82 42.7
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 1.9e-07 60.5 78 44.9
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.9e-07 60.5 87 42.5
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 1.9e-07 60.5 82 41.5
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 2.5e-07 60.1 95 37.9
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 3.3e-07 59.7 95 36.8
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 3.3e-07 59.7 87 42.5
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.3e-07 59.7 87 42.5
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.3e-07 59.7 87 42.5
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 3.3e-07 59.7 95 40.0
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 3.3e-07 59.7 95 40.0
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 3.3e-07 59.7 87 39.1
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 3.3e-07 59.7 87 41.4
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 4.3e-07 59.3 95 38.9
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 4.3e-07 59.3 87 42.5
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 4.3e-07 59.3 95 38.9
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 5.6e-07 58.9 95 38.9
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 5.6e-07 58.9 86 39.5
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 5.6e-07 58.9 95 36.8
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.4e-07 58.5 87 41.4
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.4e-07 58.5 87 41.4
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 7.4e-07 58.5 122 33.6
CBR_g46888 Chara braunii HOM05D002705 ORTHO05D004955 9.6e-07 58.2 116 35.3
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 9.6e-07 58.2 87 42.5
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 9.6e-07 58.2 87 40.2
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 9.6e-07 58.2 126 35.7
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 1.3e-06 57.8 95 37.9
Peaxi162Scf00073g01730 Petunia axillaris HOM05D002705 ORTHO05D004955 1.6e-06 57.4 82 41.5
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 1.6e-06 57.4 83 41.0
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 2.1e-06 57.0 95 37.9
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 3.6e-06 56.2 95 35.8
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 3.6e-06 56.2 126 35.7
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 3.6e-06 56.2 86 39.5
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 6.2e-06 55.5 82 37.8
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 6.2e-06 55.5 126 34.1
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 6.2e-06 55.5 126 34.1
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 8.1e-06 55.1 77 40.3
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 8.1e-06 55.1 126 33.3
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 8.1e-06 55.1 97 32.0
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 8.1e-06 55.1 95 36.8
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 8.1e-06 55.1 86 38.4


User provided reference genes

Program Settings