Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g26176 Chara braunii HOM05D005266 ORTHO05D006416 9.7e-149 530.0 250 100.0
Pp3c5_28960 Physcomitrium patens HOM05D005266 ORTHO05D006416 1.7e-31 140.6 201 36.8
AagrBONN_evm.TU.Sc2ySwM_344.5454 Anthoceros agrestis HOM05D005266 ORTHO05D006416 3.7e-31 139.4 165 38.2
PSO135G0479 Papaver somniferum HOM05D005266 ORTHO05D006416 3.7e-31 139.4 162 37.0
PSO384G5109 Papaver somniferum HOM05D005266 ORTHO05D006416 4.8e-31 139.0 162 37.0
Duzib205G1998 Durio zibethinus HOM05D005266 ORTHO05D006416 1.4e-30 137.5 160 39.4
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.8e-30 137.1 171 39.2
Gohir.A12G235200 Gossypium hirsutum HOM05D005266 ORTHO05D006416 4.1e-30 136.0 160 37.5
Gohir.D12G236400 Gossypium hirsutum HOM05D005266 ORTHO05D006416 7.0e-30 135.2 160 37.5
COL.COLO4_10665 Corchorus olitorius HOM05D005266 ORTHO05D006416 9.1e-30 134.8 160 39.4
RcHm_v2.0_Chr7g0195271 Rosa chinensis HOM05D005266 ORTHO05D006416 3.5e-29 132.9 160 37.5
CiPaw.12G084500 Carya illinoinensis HOM05D005266 ORTHO05D006416 5.9e-29 132.1 160 38.1
MBI06_g35286_MAGBIO Magnolia biondii HOM05D005266 ORTHO05D006416 5.9e-29 132.1 162 35.8
FvH4_5g04211 Fragaria vesca HOM05D005266 ORTHO05D006416 7.7e-29 131.7 160 37.5
Gorai.008G253100 Gossypium raimondii HOM05D005266 ORTHO05D006416 7.7e-29 131.7 160 36.9
VMungo1215G3249 Vigna mungo HOM05D005266 ORTHO05D006416 1.0e-28 131.3 160 38.1
Lalb_Chr05g0211611 Lupinus albus HOM05D005266 ORTHO05D006416 2.2e-28 130.2 160 36.9
Prupe.5G116300 Prunus persica HOM05D005266 ORTHO05D006416 2.2e-28 130.2 160 35.6
PGR031G3352 Punica granatum HOM05D005266 ORTHO05D006416 2.9e-28 129.8 160 38.1
Eucgr.D01715 Eucalyptus grandis HOM05D005266 ORTHO05D006416 3.8e-28 129.4 160 36.2
GSVIVG01019509001 Vitis vinifera HOM05D005266 ORTHO05D006416 3.8e-28 129.4 160 37.5
CANSAT21G1278 Cannabis sativa HOM05D005266 ORTHO05D006416 5.0e-28 129.0 185 32.4
Glyma.01G224700 Glycine max HOM05D005266 ORTHO05D006416 5.0e-28 129.0 160 37.5
TAR375G1085 Trochodendron aralioides HOM05D005266 ORTHO05D006416 5.0e-28 129.0 162 35.2
Atru.chr9.2024 Acer truncatum HOM05D005266 ORTHO05D006416 8.5e-28 128.3 160 36.9
A09p14760 Brassica napus HOM05D005266 ORTHO05D006416 8.5e-28 128.3 164 37.2
BraA09t37122Z Brassica rapa HOM05D005266 ORTHO05D006416 8.5e-28 128.3 164 37.2
Thecc.03G294500 Theobroma cacao HOM05D005266 ORTHO05D006416 8.5e-28 128.3 160 36.9
Cfa012815 Carpinus fangiana HOM05D005266 ORTHO05D006416 1.1e-27 127.9 160 35.6
MD14G1122800 Malus domestica HOM05D005266 ORTHO05D006416 1.1e-27 127.9 160 35.6
Peaxi162Scf00074g01141 Petunia axillaris HOM05D005266 ORTHO05D006416 1.1e-27 127.9 162 37.0
AT1G64350 Arabidopsis thaliana HOM05D005266 ORTHO05D006416 1.5e-27 127.5 162 37.0
Glyma.11G018300 Glycine max HOM05D005266 ORTHO05D006416 1.5e-27 127.5 160 36.9
Mapoly0117s0010 Marchantia polymorpha HOM05D005266 ORTHO05D006416 1.5e-27 127.5 203 33.5
Phvul.002G163300 Phaseolus vulgaris HOM05D005266 ORTHO05D006416 1.5e-27 127.5 160 36.2
arahy.Tifrunner.gnm1.ann1.J0IMEJ Arachis hypogaea HOM05D005266 ORTHO05D006416 1.9e-27 127.1 162 35.8
BcaB07g31457 Brassica carinata HOM05D005266 ORTHO05D006416 1.9e-27 127.1 164 36.6
LjContig00312_ERROPOS870357g0017789 Lotus japonicus HOM05D005266 ORTHO05D006416 1.9e-27 127.1 190 36.8
SGA_v2.0_scaffold305G47940 Striga asiatica HOM05D005266 ORTHO05D006416 1.9e-27 127.1 162 38.3
AL2G10520 Arabidopsis lyrata HOM05D005266 ORTHO05D006416 2.5e-27 126.7 162 37.0
arahy.Tifrunner.gnm1.ann1.B1IHLW Arachis hypogaea HOM05D005266 ORTHO05D006416 2.5e-27 126.7 162 35.8
C09p17870 Brassica napus HOM05D005266 ORTHO05D006416 2.5e-27 126.7 164 36.6
BolC9t54684H Brassica oleracea HOM05D005266 ORTHO05D006416 2.5e-27 126.7 164 36.6
Carub.0002s0044 Capsella rubella HOM05D005266 ORTHO05D006416 2.5e-27 126.7 162 37.0
FAN04G0732 Fragaria x ananassa HOM05D005266 ORTHO05D006416 2.5e-27 126.7 168 36.3
Lsat_1_v5_gn_6_84320 Lactuca sativa HOM05D005266 ORTHO05D006416 2.5e-27 126.7 162 35.8
MD06G1103700 Malus domestica HOM05D005266 ORTHO05D006416 2.5e-27 126.7 160 36.2
Ca_20295_v3 Cicer arietinum L. HOM05D005266 ORTHO05D006416 3.2e-27 126.3 160 36.9
Sp2g00410 Schrenkiella parvula HOM05D005266 ORTHO05D006416 3.2e-27 126.3 162 37.0
Thhalv10023589m.g Eutrema salsugineum HOM05D005266 ORTHO05D006416 4.2e-27 125.9 162 37.7
Nitab4.5_0007099g0010 Nicotiana tabacum HOM05D005266 ORTHO05D006416 4.2e-27 125.9 162 35.2
Zm00001eb159590 Zea mays HOM05D005266 ORTHO05D006416 4.2e-27 125.9 164 34.1
ECA240G2034 Erigeron canadensis HOM05D005266 ORTHO05D006416 5.5e-27 125.6 143 39.9
Sed0003958 Sechium edule HOM05D005266 ORTHO05D006416 5.5e-27 125.6 186 36.6
SEGI_13107 Sequoiadendron giganteum HOM05D005266 ORTHO05D006416 5.5e-27 125.6 141 37.6
BcaC04g22562 Brassica carinata HOM05D005266 ORTHO05D006416 7.2e-27 125.2 164 36.6
CARHR046620 Cardamine hirsuta HOM05D005266 ORTHO05D006416 7.2e-27 125.2 162 36.4
TWI60G1723 Tripterygium wilfordii HOM05D005266 ORTHO05D006416 7.2e-27 125.2 160 37.5
Aqoxy5G04165 Aquilegia oxysepala HOM05D005266 ORTHO05D006416 9.4e-27 124.8 163 33.7
Cc08_g15880 Coffea canephora HOM05D005266 ORTHO05D006416 9.4e-27 124.8 163 35.6
Hund14232 Selenicereus undatus HOM05D005266 ORTHO05D006416 9.4e-27 124.8 139 38.1
THA.LOC104823610 Tarenaya hassleriana HOM05D005266 ORTHO05D006416 9.4e-27 124.8 159 37.1
CDE02G0379 Ceratophyllum demersum HOM05D005266 ORTHO05D006416 1.2e-26 124.4 162 34.6
HanXRQChr11g0348461 Helianthus annuus HOM05D005266 ORTHO05D006416 1.2e-26 124.4 160 37.5
Solyc08g082100.3 Solanum lycopersicum HOM05D005266 ORTHO05D006416 1.6e-26 124.0 160 35.0
PGSC0003DMG400012295 Solanum tuberosum HOM05D005266 ORTHO05D006416 1.6e-26 124.0 160 35.0
TPR.G31703 Trifolium pratense HOM05D005266 ORTHO05D006416 1.6e-26 124.0 139 38.8
HanXRQChr03g0085181 Helianthus annuus HOM05D005266 ORTHO05D006416 2.1e-26 123.6 162 35.2
Atru.chr9.2034 Acer truncatum HOM05D005266 ORTHO05D006416 2.7e-26 123.2 159 36.5
Nitab4.5_0000223g0310 Nicotiana tabacum HOM05D005266 ORTHO05D006416 2.7e-26 123.2 162 34.6
ATR0589G095 Amborella trichopoda HOM05D005266 ORTHO05D006416 3.6e-26 122.9 164 32.9
Ciclev10021146m.g Citrus clementina HOM05D005266 ORTHO05D006416 3.6e-26 122.9 160 35.6
Lj8C194T1 Lonicera japonica HOM05D005266 ORTHO05D006416 3.6e-26 122.9 162 35.8
MSTRG.11934 Avicennia marina HOM05D005266 ORTHO05D006416 4.7e-26 122.5 164 37.2
Cpa.g.sc79.62 Carica papaya HOM05D005266 ORTHO05D006416 4.7e-26 122.5 160 36.2
SalBow1G7588 Salvia bowleyana HOM05D005266 ORTHO05D006416 4.7e-26 122.5 161 37.9
Sopen08g030390 Solanum pennellii HOM05D005266 ORTHO05D006416 4.7e-26 122.5 160 33.8
SalBow1G3663 Salvia bowleyana HOM05D005266 ORTHO05D006416 6.1e-26 122.1 161 37.9
Rhsim07G0083300 Rhododendron simsii HOM05D005266 ORTHO05D006416 8.0e-26 121.7 161 35.4
Ah.12g052360 Amaranthus hybridus HOM05D005266 ORTHO05D006416 1.0e-25 121.3 142 38.0
Lj8A209T47 Lonicera japonica HOM05D005266 ORTHO05D006416 1.0e-25 121.3 162 35.2
Medtr6g072020 Medicago truncatula HOM05D005266 ORTHO05D006416 1.4e-25 120.9 137 38.7
Os01g0620100 Oryza sativa ssp. japonica HOM05D005266 ORTHO05D006416 1.4e-25 120.9 170 32.4
Potri.003G138300 Populus trichocarpa HOM05D005266 ORTHO05D006416 1.4e-25 120.9 160 35.6
SMO147G0195 Selaginella moellendorffii HOM05D005266 ORTHO05D006416 1.4e-25 120.9 160 37.5
vmacro13906 Vaccinium macrocarpon HOM05D005266 ORTHO05D006416 1.8e-25 120.6 161 35.4
MELO3C016280.2 Cucumis melo HOM05D005266 ORTHO05D006416 2.3e-25 120.2 181 35.9
AUR62010819 Chenopodium quinoa HOM05D005266 ORTHO05D006416 3.0e-25 119.8 162 34.0
Psat1g124400 Pisum sativum HOM05D005266 ORTHO05D006416 3.0e-25 119.8 139 36.7
AUR62019818 Chenopodium quinoa HOM05D005266 ORTHO05D006416 4.0e-25 119.4 168 35.7
Oeu061096.1 Olea europaea HOM05D005266 ORTHO05D000397 4.0e-25 119.4 162 34.6
Hma1.2p1_0952F.1_g241000 Hydrangea macrophylla HOM05D005266 ORTHO05D006416 5.2e-25 119.0 160 34.4
Sabra03G0099600 Salix brachista HOM05D005266 ORTHO05D006416 6.7e-25 118.6 160 33.8
ClCG07G014940 Citrullus lanatus HOM05D005266 ORTHO05D006416 8.8e-25 118.2 139 38.8
Migut.A00673 Erythranthe guttata HOM05D005266 ORTHO05D006416 1.5e-24 117.5 162 35.8
CSS0021201 Camellia sinensis var. sinensis HOM05D005266 ORTHO05D006416 2.0e-24 117.1 160 35.0
CsaV3_4G006470 Cucumis sativus L. HOM05D005266 ORTHO05D006416 2.0e-24 117.1 186 34.9
HPP92_004677 Vanilla planifolia HOM05D005266 ORTHO05D006416 3.3e-24 116.3 125 38.4
Manes.02G011800 Manihot esculenta HOM05D005266 ORTHO05D006416 4.4e-24 115.9 160 34.4
CSS0021291 Camellia sinensis var. sinensis HOM05D005266 ORTHO05D006416 4.8e-23 112.5 161 34.2
Nn3g19065 Nelumbo nucifera HOM05D005266 ORTHO05D006416 1.1e-22 111.3 123 38.2
Actinidia27330 Actinidia chinensis HOM05D005266 ORTHO05D006416 5.3e-22 109.0 160 33.1
DCAR_027714 Daucus carota HOM05D005266 ORTHO05D006416 5.3e-22 109.0 141 31.2
unitig_899.g15005 Utricularia gibba HOM05D005266 ORTHO05D006416 6.5e-20 102.1 126 38.9
Haze_08644 Corylus avellana HOM05D005266 ORTHO05D006416 2.1e-18 97.1 177 30.5
MD14G1133100 Malus domestica HOM05D005266 ORTHO05D006416 4.0e-17 92.8 168 33.3
TAR307G0004 Trochodendron aralioides HOM05D005266 ORTHO05D006416 1.5e-16 90.9 162 29.6
FAN08G1599 Fragaria x ananassa HOM05D005266 ORTHO05D006416 4.1e-14 82.8 124 33.9
FAN13G2918 Fragaria x ananassa HOM05D005266 ORTHO05D006416 9.1e-14 81.6 124 33.1
FAN18G4151 Fragaria x ananassa HOM05D005266 ORTHO05D006416 9.1e-14 81.6 124 33.1
MCO05G347 Micromonas commoda HOM05D005266 ORTHO05D006416 3.5e-13 79.7 152 32.2
Nn1g01825 Nelumbo nucifera HOM05D005266 ORTHO05D006416 2.9e-12 76.6 124 29.8
Dinv38851 Davidia involucrata HOM05D005266 ORTHO05D006416 5.0e-12 75.9 123 31.7
Cre03.g192000 Chlamydomonas reinhardtii HOM05D005266 ORTHO05D006416 1.5e-11 74.3 178 27.0
MD06G1116200 Malus domestica HOM05D005266 ORTHO05D006416 7.2e-11 72.0 139 28.8
Sc01g0010180 Simmondsia chinensis HOM05D005266 ORTHO05D006416 9.5e-11 71.6 107 34.6
HanXRQChr03g0066311 Helianthus annuus HOM05D005266 ORTHO05D006416 1.0e-09 68.2 106 32.1
TPR.G25301 Trifolium pratense HOM05D005266 ORTHO05D006416 2.3e-09 67.0 93 34.4
CBR_g778 Chara braunii HOM05D002410 ORTHO05D002805 3.4e-08 63.2 149 30.9
EL10Ac5g12895 Beta vulgaris HOM05D005266 ORTHO05D006416 5.7e-08 62.4 116 29.3
BcaC05g30461 Brassica carinata HOM05D002410 ORTHO05D002805 3.7e-07 59.7 155 30.3
HPP92_006136 Vanilla planifolia HOM05D002410 ORTHO05D002805 4.9e-07 59.3 97 36.1
Actinidia32704 Actinidia chinensis HOM05D002410 ORTHO05D002805 1.1e-06 58.2 193 28.5
vmacro18864 Vaccinium macrocarpon HOM05D002410 ORTHO05D002805 1.4e-06 57.8 122 28.7
Nitab4.5_0003431g0020 Nicotiana tabacum HOM05D002410 ORTHO05D002805 4.1e-06 56.2 97 34.0
Sed0011484 Sechium edule HOM05D002410 ORTHO05D002805 4.1e-06 56.2 97 34.0
Dinv30449 Davidia involucrata HOM05D002410 ORTHO05D002805 5.4e-06 55.8 102 32.4
Psat2g012760 Pisum sativum HOM05D002410 ORTHO05D002805 7.0e-06 55.5 146 28.8


User provided reference genes

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