Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 2.2e-105 385.6 188 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 8.8e-78 293.9 181 80.1
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 1.8e-75 286.2 183 74.9
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 7.0e-75 284.3 183 75.4
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 7.0e-75 284.3 183 77.0
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 1.2e-74 283.5 183 76.5
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 1.6e-74 283.1 183 77.6
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 1.6e-74 283.1 183 76.0
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 2.0e-74 282.7 183 75.4
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 2.0e-74 282.7 183 76.0
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 3.5e-74 282.0 180 76.1
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 4.5e-74 281.6 183 76.0
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 5.9e-74 281.2 183 76.5
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 5.9e-74 281.2 183 77.0
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 5.9e-74 281.2 183 76.0
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 5.9e-74 281.2 180 76.7
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 5.9e-74 281.2 183 74.9
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 7.7e-74 280.8 180 76.7
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 7.7e-74 280.8 183 75.4
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 7.7e-74 280.8 183 76.0
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 7.7e-74 280.8 180 75.6
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 7.7e-74 280.8 182 74.2
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 1.0e-73 280.4 183 73.8
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 1.0e-73 280.4 183 75.4
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 1.0e-73 280.4 183 74.9
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 1.0e-73 280.4 183 76.0
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 1.3e-73 280.0 183 74.9
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 1.3e-73 280.0 183 75.4
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 1.7e-73 279.6 183 74.9
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 1.7e-73 279.6 183 75.4
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 1.7e-73 279.6 183 74.9
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 2.2e-73 279.3 183 73.8
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 2.2e-73 279.3 183 75.4
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 2.2e-73 279.3 182 76.4
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 2.2e-73 279.3 183 74.3
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 2.2e-73 279.3 183 75.4
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 2.2e-73 279.3 184 75.0
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 2.2e-73 279.3 184 75.0
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 2.9e-73 278.9 183 76.0
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 2.9e-73 278.9 180 76.1
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 2.9e-73 278.9 183 73.8
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 2.9e-73 278.9 183 73.8
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 2.9e-73 278.9 183 74.9
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 3.8e-73 278.5 180 75.6
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 3.8e-73 278.5 180 76.1
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 3.8e-73 278.5 183 74.3
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 3.8e-73 278.5 180 74.4
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 5.0e-73 278.1 180 74.4
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 5.0e-73 278.1 183 74.9
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 5.0e-73 278.1 183 74.9
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 5.0e-73 278.1 180 74.4
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 5.0e-73 278.1 180 76.1
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 5.0e-73 278.1 183 74.3
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 6.5e-73 277.7 183 73.2
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 6.5e-73 277.7 183 74.9
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 6.5e-73 277.7 183 74.9
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 6.5e-73 277.7 183 74.3
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 6.5e-73 277.7 180 75.6
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 6.5e-73 277.7 180 75.6
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 6.5e-73 277.7 183 76.0
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 6.5e-73 277.7 183 76.0
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 8.5e-73 277.3 183 74.9
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 8.5e-73 277.3 180 75.6
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 8.5e-73 277.3 183 74.3
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 8.5e-73 277.3 183 74.3
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 8.5e-73 277.3 180 75.6
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 8.5e-73 277.3 183 74.3
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 1.1e-72 276.9 183 74.3
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 1.5e-72 276.6 183 73.8
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 1.5e-72 276.6 180 75.0
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 1.5e-72 276.6 184 75.0
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 1.5e-72 276.6 183 74.9
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 1.5e-72 276.6 180 75.6
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 1.9e-72 276.2 180 75.6
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 2.5e-72 275.8 180 75.0
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 2.5e-72 275.8 180 73.9
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 2.5e-72 275.8 180 73.9
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 2.5e-72 275.8 180 75.0
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 3.2e-72 275.4 180 72.2
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 3.2e-72 275.4 180 75.6
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 3.2e-72 275.4 183 74.9
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 3.2e-72 275.4 180 72.8
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 4.2e-72 275.0 183 72.7
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 4.2e-72 275.0 183 73.2
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 4.2e-72 275.0 183 73.8
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 4.2e-72 275.0 180 72.8
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 4.2e-72 275.0 180 75.0
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 4.2e-72 275.0 180 73.9
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 4.2e-72 275.0 183 73.2
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 5.5e-72 274.6 183 73.8
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 5.5e-72 274.6 180 73.9
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 5.5e-72 274.6 180 74.4
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 5.5e-72 274.6 183 74.3
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 7.2e-72 274.2 180 75.0
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 9.4e-72 273.9 181 74.6
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 9.4e-72 273.9 180 75.0
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 9.4e-72 273.9 183 73.8
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 1.2e-71 273.5 180 73.9
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 1.2e-71 273.5 180 73.3
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 1.2e-71 273.5 180 73.3
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.6e-71 273.1 180 75.6
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 1.6e-71 273.1 183 74.3
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 2.7e-71 272.3 180 73.9
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 4.7e-71 271.6 180 75.6
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 8.0e-71 270.8 180 74.4
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.0e-70 270.4 180 75.0
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 4.0e-70 268.5 183 72.7
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 6.8e-70 267.7 182 73.1
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 1.2e-69 266.9 183 71.6
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 1.5e-69 266.5 180 71.7
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 3.4e-69 265.4 180 72.2
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 7.5e-69 264.2 180 71.7
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 7.5e-69 264.2 180 71.7
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 9.8e-69 263.8 183 71.0
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 1.3e-68 263.5 183 71.0
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 1.3e-68 263.5 183 71.0
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 1.3e-68 263.5 183 71.0
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 1.3e-68 263.5 183 71.0
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 1.3e-68 263.5 183 71.0
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 2.8e-68 262.3 180 71.7
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 2.8e-68 262.3 183 70.5
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 2.8e-68 262.3 183 70.5
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 2.8e-68 262.3 180 71.7
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 2.8e-68 262.3 183 70.5
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 3.7e-68 261.9 183 70.5
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 3.7e-68 261.9 183 70.5
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 1.1e-67 260.4 173 72.3
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 3.2e-64 248.8 162 74.7
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 2.8e-63 245.7 180 66.7
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 5.2e-62 241.5 157 75.2
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 8.8e-62 240.7 160 74.4
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 1.5e-61 240.0 154 76.6
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 3.4e-61 238.8 159 73.6
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 7.5e-61 237.7 184 61.4
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 2.3e-57 226.1 162 67.9
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 1.1e-56 223.8 170 66.5
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 1.9e-56 223.0 183 63.9
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 1.5e-53 213.4 180 59.4
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 8.3e-52 207.6 142 71.1
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 1.4e-51 206.8 141 71.6
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 1.4e-51 206.8 187 55.6
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 8.6e-49 197.6 188 53.7
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 7.3e-48 194.5 125 72.0
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 1.3e-41 173.7 183 53.6
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 1.8e-38 163.3 103 77.7
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 8.9e-38 161.0 100 78.0
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 2.7e-34 149.4 93 75.3
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 5.8e-21 105.1 68 77.9


User provided reference genes

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