Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23963 Chara braunii HOM05D003444 ORTHO05D003963 9.3e-244 847.0 645 100.0
CBR_g57069 Chara braunii HOM05D003444 ORTHO05D003963 3.0e-61 240.7 409 43.5
AagrBONN_evm.TU.Sc2ySwM_362.1384 Anthoceros agrestis HOM05D003444 ORTHO05D003963 7.3e-47 193.0 385 34.3
SMO270G0025 Selaginella moellendorffii HOM05D003444 ORTHO05D003963 1.2e-46 192.2 384 36.2
Mapoly0061s0094 Marchantia polymorpha HOM05D003444 ORTHO05D003963 1.5e-44 185.3 417 33.8
Pp3c8_10480 Physcomitrium patens HOM05D003444 ORTHO05D003963 5.8e-44 183.3 396 33.6
MBI10_g32035_MAGBIO Magnolia biondii HOM05D003444 ORTHO05D003963 9.2e-34 149.4 224 36.6
ATR1152G109 Amborella trichopoda HOM05D003444 ORTHO05D003963 2.7e-33 147.9 231 37.2
Aqoxy3G01091 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 2.7e-33 147.9 245 34.7
Dinv38555 Davidia involucrata HOM05D003444 ORTHO05D003963 3.5e-33 147.5 415 28.9
Lalb_Chr12g0201761 Lupinus albus HOM05D003444 ORTHO05D003963 6.0e-33 146.7 245 35.1
PGR083G1868 Punica granatum HOM05D003444 ORTHO05D003963 7.8e-33 146.4 395 29.1
Os06g0474200 Oryza sativa ssp. japonica HOM05D003444 ORTHO05D003963 2.3e-32 144.8 209 36.8
CANSAT80G2021 Cannabis sativa HOM05D003444 ORTHO05D003963 3.0e-32 144.4 229 34.5
PSO017G6313 Papaver somniferum HOM05D003444 ORTHO05D003963 6.6e-32 143.3 208 36.1
ECA247G0281 Erigeron canadensis HOM05D003444 ORTHO05D003963 8.6e-32 142.9 233 34.3
Gohir.A07G063100 Gossypium hirsutum HOM05D003444 ORTHO05D003963 1.5e-31 142.1 387 27.6
Lsat_1_v5_gn_1_28101 Lactuca sativa HOM05D003444 ORTHO05D003963 1.9e-31 141.7 216 34.3
Manes.14G062700 Manihot esculenta HOM05D003444 ORTHO05D003963 1.9e-31 141.7 228 34.6
FAN08G2080 Fragaria x ananassa HOM05D003444 ORTHO05D003963 2.5e-31 141.4 209 36.8
Manes.06G108200 Manihot esculenta HOM05D003444 ORTHO05D003963 3.3e-31 141.0 214 36.4
CDE05G0978 Ceratophyllum demersum HOM05D003444 ORTHO05D003963 4.3e-31 140.6 214 36.4
Eucgr.B00240 Eucalyptus grandis HOM05D003444 ORTHO05D003963 4.3e-31 140.6 220 35.0
Glyma.17G086600 Glycine max HOM05D003444 ORTHO05D003963 4.3e-31 140.6 240 35.0
Peaxi162Scf00089g01529 Petunia axillaris HOM05D003444 ORTHO05D003963 5.6e-31 140.2 392 27.8
Prupe.5G169400 Prunus persica HOM05D003444 ORTHO05D003963 5.6e-31 140.2 238 33.2
RcHm_v2.0_Chr7g0192981 Rosa chinensis HOM05D003444 ORTHO05D003963 5.6e-31 140.2 220 35.9
Zm00001eb209200 Zea mays HOM05D003444 ORTHO05D003963 5.6e-31 140.2 250 35.2
Eucgr.B03880 Eucalyptus grandis HOM05D003444 ORTHO05D003963 7.3e-31 139.8 236 33.9
Lalb_Chr08g0236641 Lupinus albus HOM05D003444 ORTHO05D003963 7.3e-31 139.8 211 34.1
arahy.Tifrunner.gnm1.ann1.T862AX Arachis hypogaea HOM05D003444 ORTHO05D003963 9.5e-31 139.4 206 35.0
Glyma.06G179400 Glycine max HOM05D003444 ORTHO05D003963 9.5e-31 139.4 200 36.5
GSVIVG01007683001 Vitis vinifera HOM05D003444 ORTHO05D003963 9.5e-31 139.4 419 27.4
CARHR082370 Cardamine hirsuta HOM05D003444 ORTHO05D003963 1.2e-30 139.0 216 33.8
MELO3C026275.2 Cucumis melo HOM05D003444 ORTHO05D003963 1.2e-30 139.0 219 34.7
PSO478G2857 Papaver somniferum HOM05D003444 ORTHO05D003963 1.2e-30 139.0 237 33.3
Potri.002G197600 Populus trichocarpa HOM05D003444 ORTHO05D003963 1.2e-30 139.0 237 32.9
Ah.11g051380 Amaranthus hybridus HOM05D003444 ORTHO05D003963 1.6e-30 138.7 396 25.8
Phvul.002G107400 Phaseolus vulgaris HOM05D003444 ORTHO05D003963 1.6e-30 138.7 208 35.1
VMungo1309G2319 Vigna mungo HOM05D003444 ORTHO05D003963 1.6e-30 138.7 208 35.1
Zm00001eb231610 Zea mays HOM05D003444 ORTHO05D003963 1.6e-30 138.7 201 36.3
HanXRQChr02g0035691 Helianthus annuus HOM05D003444 ORTHO05D003963 2.1e-30 138.3 205 35.6
Sopen03g031580 Solanum pennellii HOM05D003444 ORTHO05D003963 2.1e-30 138.3 378 27.0
Cc04_g12590 Coffea canephora HOM05D003444 ORTHO05D003963 2.8e-30 137.9 208 35.6
Glyma.05G040200 Glycine max HOM05D003444 ORTHO05D003963 2.8e-30 137.9 189 38.6
Sed0021330 Sechium edule HOM05D003444 ORTHO05D003963 2.8e-30 137.9 228 31.1
arahy.Tifrunner.gnm1.ann1.GAE861 Arachis hypogaea HOM05D003444 ORTHO05D003963 3.6e-30 137.5 238 34.0
Solyc03g112520.3 Solanum lycopersicum HOM05D003444 ORTHO05D003963 3.6e-30 137.5 384 26.6
Cpa.g.sc35.80 Carica papaya HOM05D003444 ORTHO05D003963 4.7e-30 137.1 228 33.8
Thhalv10010523m.g Eutrema salsugineum HOM05D003444 ORTHO05D003963 4.7e-30 137.1 236 30.9
FvH4_5g05840 Fragaria vesca HOM05D003444 ORTHO05D003963 4.7e-30 137.1 239 35.1
FAN18G3108 Fragaria x ananassa HOM05D003444 ORTHO05D003963 4.7e-30 137.1 239 35.1
Gorai.001G071300 Gossypium raimondii HOM05D003444 ORTHO05D003963 4.7e-30 137.1 240 34.2
HanXRQChr16g0504631 Helianthus annuus HOM05D003444 ORTHO05D003963 4.7e-30 137.1 222 33.3
Nn4g22663 Nelumbo nucifera HOM05D003444 ORTHO05D003963 4.7e-30 137.1 212 34.9
Thecc.03G023900 Theobroma cacao HOM05D003444 ORTHO05D003963 4.7e-30 137.1 410 26.8
TWI79G0312 Tripterygium wilfordii HOM05D003444 ORTHO05D003963 4.7e-30 137.1 227 34.4
MD06G1169900 Malus domestica HOM05D003444 ORTHO05D003963 6.2e-30 136.7 384 27.3
Actinidia19346 Actinidia chinensis HOM05D003444 ORTHO05D003963 8.1e-30 136.3 403 27.5
AT3G54170 Arabidopsis thaliana HOM05D003444 ORTHO05D003963 8.1e-30 136.3 201 35.3
MSTRG.23156 Avicennia marina HOM05D003444 ORTHO05D003963 8.1e-30 136.3 394 27.2
TPR.G31058 Trifolium pratense HOM05D003444 ORTHO05D003963 8.1e-30 136.3 232 33.6
ClCG09G013270 Citrullus lanatus HOM05D003444 ORTHO05D003963 1.1e-29 136.0 228 33.3
FAN04G2640 Fragaria x ananassa HOM05D003444 ORTHO05D003963 1.1e-29 136.0 228 35.1
Glyma.04G186400 Glycine max HOM05D003444 ORTHO05D003963 1.1e-29 136.0 190 36.3
Medtr3g077320 Medicago truncatula HOM05D003444 ORTHO05D003963 1.1e-29 136.0 216 34.7
arahy.Tifrunner.gnm1.ann1.NDZJ5A Arachis hypogaea HOM05D003444 ORTHO05D003963 1.4e-29 135.6 227 33.9
Ca_21949_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 1.4e-29 135.6 417 26.4
CsaV3_1G001270 Cucumis sativus L. HOM05D003444 ORTHO05D003963 1.4e-29 135.6 209 34.4
Duzib068G1143 Durio zibethinus HOM05D003444 ORTHO05D003963 1.4e-29 135.6 201 36.3
BraA07t29885Z Brassica rapa HOM05D003444 ORTHO05D003963 1.8e-29 135.2 410 26.3
Carub.0005s2076 Capsella rubella HOM05D003444 ORTHO05D003963 1.8e-29 135.2 229 31.4
CAN.G338.8 Capsicum annuum HOM05D003444 ORTHO05D003963 1.8e-29 135.2 229 35.4
CDE11G0533 Ceratophyllum demersum HOM05D003444 ORTHO05D003963 1.8e-29 135.2 225 34.7
Ca_16152_v3 Cicer arietinum L. HOM05D003444 ORTHO05D003963 1.8e-29 135.2 238 32.4
A07p22020 Brassica napus HOM05D003444 ORTHO05D003963 2.3e-29 134.8 410 26.3
AL5G35210 Arabidopsis lyrata HOM05D003444 ORTHO05D003963 3.1e-29 134.4 202 34.2
COL.COLO4_30123 Corchorus olitorius HOM05D003444 ORTHO05D003963 3.1e-29 134.4 391 29.7
SEGI_34823 Sequoiadendron giganteum HOM05D003444 ORTHO05D003963 3.1e-29 134.4 229 32.8
TAR629G1253 Trochodendron aralioides HOM05D003444 ORTHO05D003963 3.1e-29 134.4 411 28.2
PGSC0003DMG400018108 Solanum tuberosum HOM05D003444 ORTHO05D003963 4.0e-29 134.0 378 27.5
BcaB02g07746 Brassica carinata HOM05D003444 ORTHO05D003963 5.2e-29 133.7 228 32.0
Migut.G00959 Erythranthe guttata HOM05D003444 ORTHO05D003963 5.2e-29 133.7 209 34.0
Aa31sc491G40 Aethionema arabicum HOM05D003444 ORTHO05D003963 6.8e-29 133.3 202 34.7
C06p22000 Brassica napus HOM05D003444 ORTHO05D003963 6.8e-29 133.3 410 26.3
BolC6t37388H Brassica oleracea HOM05D003444 ORTHO05D003963 6.8e-29 133.3 410 26.3
Ciclev10020974m.g Citrus clementina HOM05D003444 ORTHO05D003963 6.8e-29 133.3 214 34.6
Lj4g0001447 Lotus japonicus HOM05D003444 ORTHO05D003963 6.8e-29 133.3 228 32.9
Oeu046785.1 Olea europaea HOM05D003444 ORTHO05D003963 6.8e-29 133.3 213 35.2
THA.LOC104809841 Tarenaya hassleriana HOM05D003444 ORTHO05D003963 6.8e-29 133.3 415 25.8
EL10Ac5g10690 Beta vulgaris HOM05D003444 ORTHO05D003963 8.9e-29 132.9 409 26.4
Migut.O00133 Erythranthe guttata HOM05D003444 ORTHO05D003963 8.9e-29 132.9 215 33.5
arahy.Tifrunner.gnm1.ann1.9FBM9V Arachis hypogaea HOM05D003444 ORTHO05D003963 1.2e-28 132.5 218 37.2
CiPaw.12G029000 Carya illinoinensis HOM05D003444 ORTHO05D003963 1.2e-28 132.5 245 31.4
Haze_07554 Corylus avellana HOM05D003444 ORTHO05D003963 1.2e-28 132.5 237 32.1
Lj1g0020971 Lotus japonicus HOM05D003444 ORTHO05D003963 2.0e-28 131.7 186 37.1
arahy.Tifrunner.gnm1.ann1.P2M8BS Arachis hypogaea HOM05D003444 ORTHO05D003963 2.6e-28 131.3 223 32.3
SGA_v2.0_scaffold90G27874 Striga asiatica HOM05D003444 ORTHO05D003963 2.6e-28 131.3 227 31.3
Psat4g060120 Pisum sativum HOM05D003444 ORTHO05D003963 3.4e-28 131.0 234 33.3
QL10p008500 Quercus lobata HOM05D003444 ORTHO05D003963 3.4e-28 131.0 247 30.4
SGA_v2.0_scaffold25G10811 Striga asiatica HOM05D003444 ORTHO05D003963 3.4e-28 131.0 225 33.3
TWI75G1457 Tripterygium wilfordii HOM05D003444 ORTHO05D003963 3.4e-28 131.0 226 33.2
C08p29430 Brassica napus HOM05D003444 ORTHO05D003963 4.4e-28 130.6 232 31.9
BolC8t50544H Brassica oleracea HOM05D003444 ORTHO05D003963 4.4e-28 130.6 232 31.9
SalBow5G0548 Salvia bowleyana HOM05D003444 ORTHO05D003963 4.4e-28 130.6 204 32.4
Hund09457 Selenicereus undatus HOM05D003444 ORTHO05D003963 4.4e-28 130.6 391 26.3
Sc12g0005160 Simmondsia chinensis HOM05D003444 ORTHO05D003963 4.4e-28 130.6 421 26.4
TPR.G37557 Trifolium pratense HOM05D003444 ORTHO05D003963 4.4e-28 130.6 237 34.2
A09p47170 Brassica napus HOM05D003444 ORTHO05D003963 5.8e-28 130.2 232 31.9
Nitab4.5_0001284g0080 Nicotiana tabacum HOM05D003444 ORTHO05D003963 5.8e-28 130.2 161 41.6
Sp5g08230 Schrenkiella parvula HOM05D003444 ORTHO05D003963 5.8e-28 130.2 230 31.3
arahy.Tifrunner.gnm1.ann1.BAEJ4E Arachis hypogaea HOM05D003444 ORTHO05D003963 1.3e-27 129.0 167 40.1
BraA09t40179Z Brassica rapa HOM05D003444 ORTHO05D003963 2.2e-27 128.3 232 31.9
TPR.G7254 Trifolium pratense HOM05D003444 ORTHO05D003963 2.2e-27 128.3 216 33.3
BcaB01g00212 Brassica carinata HOM05D003444 ORTHO05D003963 2.9e-27 127.9 241 31.1
Nitab4.5_0001647g0010 Nicotiana tabacum HOM05D003444 ORTHO05D003963 2.9e-27 127.9 226 34.1
Psat0s2597g0040 Pisum sativum HOM05D003444 ORTHO05D003963 3.7e-27 127.5 180 38.9
Aqoxy3G02821 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 4.9e-27 127.1 375 28.0
CiPaw.11G022500 Carya illinoinensis HOM05D003444 ORTHO05D003963 6.4e-27 126.7 429 24.9
HPP92_013532 Vanilla planifolia HOM05D003444 ORTHO05D003963 8.3e-27 126.3 233 30.9
Medtr0325s0020 Medicago truncatula HOM05D003444 ORTHO05D003963 1.1e-26 125.9 384 25.5
Aqoxy1G03753 Aquilegia oxysepala HOM05D003444 ORTHO05D003963 1.4e-26 125.6 375 27.7
BcaC08g44673 Brassica carinata HOM05D003444 ORTHO05D003963 1.9e-26 125.2 231 31.2
arahy.Tifrunner.gnm1.ann1.N3JE1D Arachis hypogaea HOM05D003444 ORTHO05D003963 2.4e-26 124.8 170 35.3
DCAR_026161 Daucus carota HOM05D003444 ORTHO05D003963 2.4e-26 124.8 225 32.4
arahy.Tifrunner.gnm1.ann1.V3MNVK Arachis hypogaea HOM05D003444 ORTHO05D003963 3.2e-26 124.4 175 34.3
AUR62028748 Chenopodium quinoa HOM05D003444 ORTHO05D003963 5.4e-26 123.6 224 32.6
BcaNung05459 Brassica carinata HOM05D003444 ORTHO05D003963 7.1e-26 123.2 418 25.6
Duzib205G1696 Durio zibethinus HOM05D003444 ORTHO05D003963 1.2e-25 122.5 397 27.5
Lj5A128T62 Lonicera japonica HOM05D003444 ORTHO05D003963 1.2e-25 122.5 252 30.2
Dinv20618 Davidia involucrata HOM05D003444 ORTHO05D003963 3.5e-25 120.9 363 27.8
Cfa019176 Carpinus fangiana HOM05D003444 ORTHO05D003963 8.6e-24 116.3 240 31.2
unitig_8.g3056 Utricularia gibba HOM05D003444 ORTHO05D003963 6.2e-22 110.2 225 31.6
AUR62008171 Chenopodium quinoa HOM05D003444 ORTHO05D003963 3.1e-21 107.8 224 29.9
QL10p008629 Quercus lobata HOM05D003444 ORTHO05D003963 9.9e-20 102.8 182 30.2
COL.COLO4_30111 Corchorus olitorius HOM05D003444 ORTHO05D003963 3.8e-19 100.9 149 33.6
Gohir.D07G067800 Gossypium hirsutum HOM05D003444 ORTHO05D003963 4.9e-19 100.5 162 37.0
CSS0046637 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 7.1e-18 96.7 392 25.5
TAR374G1632 Trochodendron aralioides HOM05D003444 ORTHO05D003963 9.2e-18 96.3 157 37.6
SGA_v2.0_scaffold90G27871 Striga asiatica HOM05D003444 ORTHO05D003963 3.9e-16 90.9 178 29.8
Sed0013109 Sechium edule HOM05D003444 ORTHO05D003963 7.3e-15 86.7 201 27.9
Rhsim08G0175500 Rhododendron simsii HOM05D003444 ORTHO05D003963 2.8e-14 84.7 207 28.0
Cre07.g347250 Chlamydomonas reinhardtii HOM05D062783 ORTHO05D003963 6.2e-14 83.6 147 34.0
Lsat_1_v5_gn_4_76300 Lactuca sativa HOM05D003444 ORTHO05D003963 8.1e-14 83.2 101 38.6
ClCG06G017220 Citrullus lanatus HOM05D003444 ORTHO05D003963 1.1e-13 82.8 196 30.6
vmacro19322 Vaccinium macrocarpon HOM05D003444 ORTHO05D003963 7.6e-12 76.6 90 40.0
CSS0033661 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 6.4e-11 73.6 139 33.1
CSS0017244 Camellia sinensis var. sinensis HOM05D003444 ORTHO05D003963 8.4e-11 73.2 149 28.9
Nitab4.5_0010304g0010 Nicotiana tabacum HOM05D006400 ORTHO05D008039 8.4e-11 73.2 148 34.5
Hma1.2p1_0046F.1_g026870 Hydrangea macrophylla HOM05D003444 ORTHO05D003963 1.4e-10 72.4 79 40.5
Hma1.2p1_0046F.1_g026860 Hydrangea macrophylla HOM05D003444 ORTHO05D003963 2.3e-08 65.1 97 37.1


User provided reference genes

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