Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 2.9e-221 771.5 377 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 2.0e-169 599.4 369 78.6
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 3.1e-167 592.0 371 78.2
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 6.8e-162 574.3 370 74.3
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 7.5e-161 570.9 375 73.9
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.8e-159 566.2 375 73.6
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 3.8e-157 558.5 362 73.2
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 2.0e-145 519.6 371 67.1
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 5.8e-145 518.1 374 67.1
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 2.9e-144 515.8 371 66.8
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 3.7e-144 515.4 368 68.5
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 3.7e-144 515.4 371 66.6
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.4e-143 513.5 374 66.6
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 7.0e-143 511.1 374 66.3
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 1.2e-142 510.4 372 66.1
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 1.2e-142 510.4 372 66.1
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.2e-142 510.4 371 66.3
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 3.5e-142 508.8 372 65.9
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 4.6e-142 508.4 372 65.9
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 4.6e-142 508.4 371 66.6
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 7.8e-142 507.7 372 65.9
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.0e-141 507.3 371 66.6
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.7e-141 506.5 369 67.8
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.7e-141 506.5 371 65.5
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.3e-141 506.1 373 66.2
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 3.0e-141 505.8 372 65.9
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 5.0e-141 505.0 374 66.3
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 5.0e-141 505.0 371 66.3
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 6.6e-141 504.6 374 66.0
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.6e-141 504.2 371 66.0
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 8.6e-141 504.2 371 66.0
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.6e-141 504.2 372 65.9
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.1e-140 503.8 374 65.8
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.1e-140 503.8 371 66.0
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 1.5e-140 503.4 366 65.6
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.9e-140 503.1 372 64.8
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.5e-140 502.7 372 64.8
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.5e-140 502.7 369 66.1
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.5e-140 502.7 366 65.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 3.3e-140 502.3 371 65.5
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 4.3e-140 501.9 371 65.5
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 4.3e-140 501.9 373 65.7
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 4.3e-140 501.9 371 64.7
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 9.5e-140 500.7 363 65.6
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 9.5e-140 500.7 369 64.8
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 9.5e-140 500.7 385 64.7
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.2e-139 500.4 363 65.3
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.2e-139 500.4 363 65.3
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.2e-139 500.4 363 65.3
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.2e-139 500.4 363 65.3
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.2e-139 500.4 363 65.3
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.2e-139 500.4 369 65.6
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.6e-139 500.0 371 65.5
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.6e-139 500.0 370 65.9
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.6e-139 500.0 372 64.8
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.6e-139 500.0 372 64.8
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 2.1e-139 499.6 374 65.2
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 2.1e-139 499.6 373 65.7
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 2.8e-139 499.2 372 65.9
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 3.6e-139 498.8 371 65.2
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 3.6e-139 498.8 371 65.2
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 4.7e-139 498.4 366 65.6
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 6.2e-139 498.0 371 64.7
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 8.1e-139 497.7 371 64.4
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 1.1e-138 497.3 372 65.6
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.4e-138 496.9 373 64.6
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.8e-138 496.5 371 64.7
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.8e-138 496.5 371 64.7
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 3.1e-138 495.7 371 65.8
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 3.1e-138 495.7 372 65.1
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 3.1e-138 495.7 371 64.7
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 4.0e-138 495.4 405 61.0
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 4.0e-138 495.4 370 65.1
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.8e-138 494.6 371 64.4
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 6.8e-138 494.6 366 65.6
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 8.9e-138 494.2 372 64.0
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 8.9e-138 494.2 370 65.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 1.2e-137 493.8 371 65.0
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.2e-137 493.8 374 65.5
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.5e-137 493.4 371 65.5
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.0e-137 493.0 371 64.7
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 2.0e-137 493.0 371 64.2
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 2.6e-137 492.7 371 64.4
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 2.6e-137 492.7 371 65.0
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 4.4e-137 491.9 371 64.2
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 5.8e-137 491.5 372 65.1
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 7.5e-137 491.1 371 65.2
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 9.8e-137 490.7 366 65.3
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 9.8e-137 490.7 371 65.5
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.3e-136 490.3 371 64.7
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.3e-136 490.3 371 64.7
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.3e-136 490.3 386 62.7
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.7e-136 490.0 371 64.7
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 2.2e-136 489.6 371 65.2
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 2.9e-136 489.2 371 63.6
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.9e-136 489.2 377 61.8
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 3.7e-136 488.8 378 65.1
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 3.7e-136 488.8 366 64.2
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.4e-135 486.9 370 64.1
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.9e-135 486.5 371 64.4
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.9e-135 486.5 368 66.3
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 2.4e-135 486.1 364 63.2
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 3.2e-135 485.7 359 66.3
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 4.1e-135 485.3 371 64.2
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 5.4e-135 485.0 371 64.2
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 5.4e-135 485.0 371 63.6
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 9.2e-135 484.2 364 63.7
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 9.2e-135 484.2 372 64.2
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 1.6e-134 483.4 372 64.0
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.1e-134 483.0 361 64.5
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.7e-134 482.6 372 63.7
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 3.5e-134 482.3 398 60.8
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.5e-134 482.3 371 63.6
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 4.6e-134 481.9 372 64.0
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 6.0e-134 481.5 370 62.4
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.0e-133 480.7 375 62.7
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.0e-133 480.7 371 62.3
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.7e-133 479.9 384 62.2
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 3.9e-133 478.8 410 58.5
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 1.1e-132 477.2 369 63.7
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 3.3e-132 475.7 370 62.7
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 5.6e-132 474.9 368 62.5
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 1.2e-131 473.8 369 63.1
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 2.1e-131 473.0 357 64.1
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 2.8e-131 472.6 362 63.8
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 8.1e-131 471.1 372 62.6
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.1e-130 470.7 371 63.1
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.1e-130 470.7 366 62.0
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 3.1e-130 469.2 360 64.7
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 6.8e-130 468.0 364 62.9
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 6.8e-130 468.0 372 62.6
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.0e-129 466.5 352 64.2
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 7.6e-129 464.5 437 55.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.2e-128 463.0 364 61.8
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 8.4e-128 461.1 374 61.0
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.9e-127 459.9 364 62.6
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.4e-127 459.5 371 60.9
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 9.2e-127 457.6 371 62.3
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 2.7e-126 456.1 351 64.7
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.5e-126 455.7 352 63.6
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 6.0e-126 454.9 352 63.6
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.0e-125 454.1 364 63.5
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 2.3e-125 453.0 368 61.1
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 3.9e-125 452.2 366 61.2
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 1.1e-124 450.7 361 61.5
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 9.6e-124 447.6 352 63.6
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 5.2e-122 441.8 377 59.2
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 7.6e-121 438.0 397 57.2
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 6.0e-118 428.3 408 53.2
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 7.3e-116 421.4 371 56.6
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 2.5e-108 396.4 360 55.0
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 9.0e-106 387.9 292 65.4
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 3.4e-105 386.0 289 65.4
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 6.4e-104 381.7 285 64.6
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.2e-103 379.0 327 58.1
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 4.2e-103 379.0 352 56.8
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 6.7e-101 371.7 281 64.4
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.3e-100 369.4 281 62.6
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 3.3e-100 369.4 334 55.7
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 3.7e-99 365.9 280 62.5
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.4e-98 363.2 281 62.3
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 2.0e-97 360.1 282 61.3
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 1.6e-91 340.5 274 59.9
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 4.8e-91 339.0 292 56.8
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 3.1e-90 336.3 275 61.5
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 3.8e-88 329.3 241 64.7
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 3.6e-70 269.6 275 51.6
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 3.0e-69 266.5 200 66.5
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 4.8e-67 259.2 177 69.5
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.5e-65 253.1 199 58.8
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.6e-62 243.0 198 60.6
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 6.5e-56 222.2 172 62.8
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 1.9e-47 194.1 374 32.1
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 5.2e-45 186.0 454 31.1
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 2.0e-44 184.1 260 45.0
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.3e-40 171.4 390 27.7
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.7e-35 154.5 113 69.9
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 9.2e-34 148.7 119 56.3
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 4.6e-33 146.4 148 50.7
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 3.9e-32 143.3 119 53.8
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 6.6e-32 142.5 299 32.4
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 6.0e-25 119.4 113 52.2
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 2.6e-20 104.0 83 59.0
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.1e-07 62.0 68 45.6


User provided reference genes

Program Settings