Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23684 Chara braunii HOM05D002496 ORTHO05D002787 3.5e-169 598.2 298 100.0
CBR_g45183 Chara braunii HOM05D000717 ORTHO05D000555 6.7e-64 248.4 148 79.7
CBR_g34269 Chara braunii HOM05D016928 ORTHO05D012435 1.8e-40 170.6 81 93.8
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 1.4e-21 107.8 109 56.0
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 1.9e-21 107.5 110 58.2
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 1.9e-21 107.5 109 58.7
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 1.9e-21 107.5 109 58.7
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 2.4e-21 107.1 110 58.2
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 4.1e-21 106.3 110 57.3
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 5.4e-21 105.9 110 57.3
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 5.4e-21 105.9 109 57.8
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 5.4e-21 105.9 110 58.2
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 5.4e-21 105.9 110 58.2
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 5.4e-21 105.9 107 57.9
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 5.4e-21 105.9 110 56.4
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 7.0e-21 105.5 109 57.8
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 7.0e-21 105.5 107 59.8
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 7.0e-21 105.5 109 55.0
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 7.0e-21 105.5 110 57.3
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 1.2e-20 104.8 110 57.3
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 1.2e-20 104.8 109 57.8
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 1.2e-20 104.8 109 57.8
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 1.2e-20 104.8 110 57.3
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 1.2e-20 104.8 109 56.9
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 1.6e-20 104.4 110 56.4
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 1.6e-20 104.4 108 59.3
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 1.6e-20 104.4 109 56.9
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.6e-20 104.4 109 56.9
CBR_g46815 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-20 104.0 116 50.0
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 2.0e-20 104.0 110 57.3
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 2.0e-20 104.0 109 56.9
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 2.0e-20 104.0 110 53.6
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 3.5e-20 103.2 108 58.3
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 3.5e-20 103.2 108 58.3
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 3.5e-20 103.2 109 56.9
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 3.5e-20 103.2 109 56.9
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 3.5e-20 103.2 109 56.0
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 3.5e-20 103.2 109 56.9
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 4.6e-20 102.8 109 56.9
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 4.6e-20 102.8 110 56.4
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 4.6e-20 102.8 109 57.8
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 4.6e-20 102.8 108 55.6
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 4.6e-20 102.8 109 56.9
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 4.6e-20 102.8 106 57.5
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 4.6e-20 102.8 109 57.8
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 4.6e-20 102.8 109 57.8
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 6.0e-20 102.4 109 56.9
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 6.0e-20 102.4 106 58.5
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 6.0e-20 102.4 109 56.9
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 6.0e-20 102.4 109 56.9
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 7.8e-20 102.1 109 56.9
AUR62040902 Chenopodium quinoa HOM05D002496 ORTHO05D002787 7.8e-20 102.1 113 54.0
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 7.8e-20 102.1 112 57.1
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 7.8e-20 102.1 109 56.0
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 7.8e-20 102.1 103 58.3
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 7.8e-20 102.1 103 58.3
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 1.0e-19 101.7 110 58.2
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 1.0e-19 101.7 109 56.9
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 1.0e-19 101.7 109 56.0
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 1.3e-19 101.3 109 55.0
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 1.3e-19 101.3 109 57.8
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 1.7e-19 100.9 110 57.3
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 1.7e-19 100.9 110 57.3
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 1.7e-19 100.9 110 57.3
Psat7g064160 Pisum sativum HOM05D002496 ORTHO05D002787 1.7e-19 100.9 110 56.4
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 1.7e-19 100.9 110 57.3
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 2.3e-19 100.5 106 56.6
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 2.3e-19 100.5 103 58.3
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 2.3e-19 100.5 106 57.5
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 2.3e-19 100.5 105 59.0
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 3.0e-19 100.1 109 56.0
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 3.0e-19 100.1 106 58.5
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 3.0e-19 100.1 109 55.0
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 3.0e-19 100.1 109 55.0
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 3.0e-19 100.1 109 55.0
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 3.0e-19 100.1 105 57.1
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 3.9e-19 99.8 106 58.5
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 3.9e-19 99.8 109 56.0
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 5.0e-19 99.4 105 59.0
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 5.0e-19 99.4 110 50.0
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 5.0e-19 99.4 115 54.8
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 6.6e-19 99.0 106 57.5
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 6.6e-19 99.0 103 58.3
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 8.6e-19 98.6 106 57.5
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 8.6e-19 98.6 106 57.5
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 8.6e-19 98.6 108 55.6
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 8.6e-19 98.6 109 56.0
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 8.6e-19 98.6 103 58.3
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 8.6e-19 98.6 109 56.0
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 1.1e-18 98.2 110 56.4
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 1.5e-18 97.8 106 56.6
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 1.5e-18 97.8 108 52.8
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 1.5e-18 97.8 109 56.0
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 1.9e-18 97.4 102 58.8
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 1.9e-18 97.4 106 55.7
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 1.9e-18 97.4 106 56.6
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 1.9e-18 97.4 102 57.8
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 2.5e-18 97.1 107 56.1
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 3.3e-18 96.7 109 56.9
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 3.3e-18 96.7 103 58.3
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 3.3e-18 96.7 102 58.8
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 4.3e-18 96.3 102 58.8
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 4.3e-18 96.3 102 58.8
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 4.3e-18 96.3 103 56.3
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 4.3e-18 96.3 103 56.3
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 5.6e-18 95.9 110 53.6
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 5.6e-18 95.9 103 57.3
BcaC08g43619 Brassica carinata HOM05D002496 ORTHO05D002787 7.3e-18 95.5 102 57.8
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 7.3e-18 95.5 102 57.8
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 7.3e-18 95.5 102 57.8
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 9.5e-18 95.1 106 54.7
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 2.1e-17 94.0 106 53.8
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.8e-17 93.6 101 56.4
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 3.6e-17 93.2 102 56.9
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 7.5e-15 85.5 84 59.5
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 2.2e-14 84.0 121 48.8
C03p92650 Brassica napus HOM05D002496 ORTHO05D002787 3.2e-13 80.1 99 52.5
MBI16_g03604_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 4.6e-12 76.3 84 54.8
CBR_g34121 Chara braunii HOM05D000004 ORTHO05D000002 2.5e-10 70.5 46 67.4
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 1.8e-08 64.3 98 49.0
CBR_g9061 Chara braunii HOM05D008350 ORTHO05D010575 2.6e-07 60.5 66 40.9
CBR_g11942 Chara braunii HOM05D000019 ORTHO05D000002 9.9e-07 58.5 33 81.8
CBR_g37588 Chara braunii HOM05D008350 ORTHO05D006807 4.9e-06 56.2 76 36.8
SHI31315 Sapria himalayana HOM05D002496 ORTHO05D002787 8.4e-06 55.5 49 61.2


User provided reference genes

Program Settings