Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23107 Chara braunii HOM05D004082 ORTHO05D004729 0.0e+00 2337.8 1122 100.0
SMO367G0677 Selaginella moellendorffii HOM05D004082 ORTHO05D004729 1.7e-264 916.8 812 55.9
Pp3c8_17060 Physcomitrium patens HOM05D004082 ORTHO05D004729 2.5e-252 876.3 837 52.4
Mapoly0034s0073 Marchantia polymorpha HOM05D004082 ORTHO05D004729 2.7e-251 872.8 848 51.4
Lj5g0001168 Lotus japonicus HOM05D004082 ORTHO05D004729 1.6e-246 857.1 1127 42.7
A06p05830 Brassica napus HOM05D004082 ORTHO05D004729 2.0e-246 856.7 842 51.7
Glyma.19G235500 Glycine max HOM05D004082 ORTHO05D004729 7.7e-246 854.7 878 50.0
THA.LOC104805875 Tarenaya hassleriana HOM05D004082 ORTHO05D004729 7.7e-246 854.7 861 50.9
arahy.Tifrunner.gnm1.ann1.7P2G6T Arachis hypogaea HOM05D004082 ORTHO05D004729 3.8e-245 852.4 847 51.4
C05p07040 Brassica napus HOM05D004082 ORTHO05D004729 1.5e-244 850.5 843 51.2
BolC5t29459H Brassica oleracea HOM05D004082 ORTHO05D004729 1.5e-244 850.5 843 51.2
CARHR008900 Cardamine hirsuta HOM05D004082 ORTHO05D004729 1.5e-244 850.5 930 49.2
MELO3C015324.2 Cucumis melo HOM05D004082 ORTHO05D004729 1.9e-244 850.1 1134 42.2
Medtr7g113570 Medicago truncatula HOM05D004082 ORTHO05D004729 2.5e-244 849.7 899 49.5
Dinv40289 Davidia involucrata HOM05D004082 ORTHO05D004729 4.2e-244 849.0 842 51.2
Glyma.03G238100 Glycine max HOM05D004082 ORTHO05D004729 7.2e-244 848.2 857 50.6
SalBow3G1583 Salvia bowleyana HOM05D004082 ORTHO05D004729 7.2e-244 848.2 847 51.0
Lj1g0013013 Lotus japonicus HOM05D004082 ORTHO05D004729 9.4e-244 847.8 849 50.9
Peaxi162Scf00037g00423 Petunia axillaris HOM05D004082 ORTHO05D004729 1.6e-243 847.0 841 50.5
Phvul.006G092100 Phaseolus vulgaris HOM05D004082 ORTHO05D004729 2.1e-243 846.7 882 49.0
A08p34860 Brassica napus HOM05D004082 ORTHO05D004729 8.0e-243 844.7 858 50.7
Carub.0001s0833 Capsella rubella HOM05D004082 ORTHO05D004729 8.0e-243 844.7 856 50.9
Ah.06g189390 Amaranthus hybridus HOM05D004082 ORTHO05D004729 1.0e-242 844.3 841 51.1
BolC8t48880H Brassica oleracea HOM05D004082 ORTHO05D004729 1.8e-242 843.6 896 48.9
Duzib177G1172 Durio zibethinus HOM05D004082 ORTHO05D004729 4.0e-242 842.4 876 49.2
Lj5C472G3 Lonicera japonica HOM05D004082 ORTHO05D004729 4.0e-242 842.4 842 50.6
Sp1g07620 Schrenkiella parvula HOM05D004082 ORTHO05D004729 4.0e-242 842.4 914 48.6
arahy.Tifrunner.gnm1.ann1.0R76NZ Arachis hypogaea HOM05D004082 ORTHO05D004729 5.2e-242 842.0 866 50.3
C08p12400 Brassica napus HOM05D004082 ORTHO05D004729 5.2e-242 842.0 896 48.8
TPR.G6044 Trifolium pratense HOM05D004082 ORTHO05D004729 5.2e-242 842.0 848 51.1
BraA08t35397Z Brassica rapa HOM05D004082 ORTHO05D004729 1.2e-241 840.9 858 50.2
Oeu038297.1 Olea europaea HOM05D004082 ORTHO05D004729 1.5e-241 840.5 1139 41.6
Pp3c15_10050 Physcomitrium patens HOM05D004082 ORTHO05D004729 1.5e-241 840.5 827 50.9
GSVIVG01000073001 Vitis vinifera HOM05D004082 ORTHO05D004729 1.5e-241 840.5 842 50.2
Sed0016495 Sechium edule HOM05D004082 ORTHO05D004729 2.0e-241 840.1 874 49.5
TAR636G3250 Trochodendron aralioides HOM05D004082 ORTHO05D004729 2.0e-241 840.1 840 50.2
Ca_10110_v3 Cicer arietinum L. HOM05D004082 ORTHO05D004729 2.6e-241 839.7 1135 42.5
Gohir.D13G110800 Gossypium hirsutum HOM05D004082 ORTHO05D004729 3.4e-241 839.3 881 49.5
Cc02_g33390 Coffea canephora HOM05D004082 ORTHO05D004729 4.4e-241 839.0 843 51.2
Lj5C530G2 Lonicera japonica HOM05D004082 ORTHO05D004729 4.4e-241 839.0 842 50.4
Psat3g011080 Pisum sativum HOM05D004082 ORTHO05D004729 5.7e-241 838.6 848 50.5
Aqoxy5G00500 Aquilegia oxysepala HOM05D004082 ORTHO05D004729 7.5e-241 838.2 836 50.1
Psat6g151160 Pisum sativum HOM05D004082 ORTHO05D004729 9.8e-241 837.8 1131 42.4
QL03p007071 Quercus lobata HOM05D004082 ORTHO05D004729 9.8e-241 837.8 842 50.7
arahy.Tifrunner.gnm1.ann1.DUKX6J Arachis hypogaea HOM05D004082 ORTHO05D004729 1.7e-240 837.0 846 50.5
Potri.013G021200 Populus trichocarpa HOM05D004082 ORTHO05D004729 1.7e-240 837.0 845 50.8
MSTRG.27997 Avicennia marina HOM05D004082 ORTHO05D004729 2.2e-240 836.6 849 51.1
Manes.08G120500 Manihot esculenta HOM05D004082 ORTHO05D004729 2.8e-240 836.3 843 50.8
TPR.G33180 Trifolium pratense HOM05D004082 ORTHO05D004729 2.8e-240 836.3 909 48.8
AT1G09010 Arabidopsis thaliana HOM05D004082 ORTHO05D004729 3.7e-240 835.9 856 50.7
AL1G19440 Arabidopsis lyrata HOM05D004082 ORTHO05D004729 4.8e-240 835.5 861 50.9
BcaB07g34118 Brassica carinata HOM05D004082 ORTHO05D004729 4.8e-240 835.5 856 50.6
Migut.N02007 Erythranthe guttata HOM05D004082 ORTHO05D004729 8.3e-240 834.7 848 50.5
PGSC0003DMG401024737 Solanum tuberosum HOM05D004082 ORTHO05D004729 8.3e-240 834.7 838 50.5
SGA_v2.0_scaffold81G26069 Striga asiatica HOM05D004082 ORTHO05D004729 1.1e-239 834.3 847 50.3
VMungo0720G1572 Vigna mungo HOM05D004082 ORTHO05D004729 1.1e-239 834.3 841 50.5
Gorai.007G297200 Gossypium raimondii HOM05D004082 ORTHO05D004729 1.4e-239 833.9 837 50.4
MD12G1218800 Malus domestica HOM05D004082 ORTHO05D004729 1.4e-239 833.9 844 50.5
Prupe.6G325300 Prunus persica HOM05D004082 ORTHO05D004729 1.4e-239 833.9 842 50.0
Aqoxy2G03354 Aquilegia oxysepala HOM05D004082 ORTHO05D004729 2.4e-239 833.2 842 49.9
Phvul.007G180100 Phaseolus vulgaris HOM05D004082 ORTHO05D004729 3.1e-239 832.8 841 50.4
VMungo0540G1737 Vigna mungo HOM05D004082 ORTHO05D004729 3.1e-239 832.8 846 49.8
EL10Ac4g09354 Beta vulgaris HOM05D004082 ORTHO05D004729 4.1e-239 832.4 837 50.2
Sabra13G0023600 Salix brachista HOM05D004082 ORTHO05D004729 4.1e-239 832.4 842 50.1
Aa31sc136G30 Aethionema arabicum HOM05D004082 ORTHO05D004729 7.0e-239 831.6 838 51.1
arahy.Tifrunner.gnm1.ann1.MMBS5J Arachis hypogaea HOM05D004082 ORTHO05D004729 9.1e-239 831.2 861 50.1
CsaV3_1G038970 Cucumis sativus L. HOM05D004082 ORTHO05D004729 1.2e-238 830.9 869 49.5
Eucgr.H04490 Eucalyptus grandis HOM05D004082 ORTHO05D004729 1.2e-238 830.9 842 50.2
Lalb_Chr02g0148261 Lupinus albus HOM05D004082 ORTHO05D004729 1.2e-238 830.9 838 50.5
Hund07072 Selenicereus undatus HOM05D004082 ORTHO05D004729 1.2e-238 830.9 837 50.5
FvH4_6g05900 Fragaria vesca HOM05D004082 ORTHO05D004729 1.6e-238 830.5 843 50.2
Sopen01g042650 Solanum pennellii HOM05D004082 ORTHO05D004729 1.6e-238 830.5 838 50.2
FAN14G3006 Fragaria x ananassa HOM05D004082 ORTHO05D004729 2.0e-238 830.1 843 50.2
Haze_04194 Corylus avellana HOM05D004082 ORTHO05D004729 3.5e-238 829.3 838 50.4
DCAR_003333 Daucus carota HOM05D004082 ORTHO05D004729 3.5e-238 829.3 843 50.2
Solyc01g099090.3 Solanum lycopersicum HOM05D004082 ORTHO05D004729 5.9e-238 828.6 838 50.2
RcHm_v2.0_Chr3g0454891 Rosa chinensis HOM05D004082 ORTHO05D004729 7.7e-238 828.2 845 49.9
Glyma.20G233900 Glycine max HOM05D004082 ORTHO05D004729 1.0e-237 827.8 841 50.2
CiPaw.07G018100 Carya illinoinensis HOM05D004082 ORTHO05D004729 1.7e-237 827.0 842 50.5
Ciclev10000150m.g Citrus clementina HOM05D004082 ORTHO05D004729 1.7e-237 827.0 860 49.1
Glyma.10G154400 Glycine max HOM05D004082 ORTHO05D004729 2.3e-237 826.6 841 50.1
Lalb_Chr18g0045631 Lupinus albus HOM05D004082 ORTHO05D004729 2.3e-237 826.6 846 49.6
Os05g0391500 Oryza sativa ssp. japonica HOM05D004082 ORTHO05D004729 2.3e-237 826.6 917 47.5
PSO832G1048 Papaver somniferum HOM05D004082 ORTHO05D004729 2.9e-237 826.2 860 49.2
HPP92_001021 Vanilla planifolia HOM05D004082 ORTHO05D004729 3.8e-237 825.9 842 49.3
Thecc.05G302900 Theobroma cacao HOM05D004082 ORTHO05D004729 8.6e-237 824.7 876 48.9
CSS0005144 Camellia sinensis var. sinensis HOM05D004082 ORTHO05D004729 1.1e-236 824.3 836 50.5
FAN05G3196 Fragaria x ananassa HOM05D004082 ORTHO05D004729 1.5e-236 823.9 849 50.1
Duzib106G1815 Durio zibethinus HOM05D004082 ORTHO05D004729 4.2e-236 822.4 842 49.9
Zm00001eb287240 Zea mays HOM05D004082 ORTHO05D004729 4.2e-236 822.4 865 48.1
HanXRQChr02g0046191 Helianthus annuus HOM05D004082 ORTHO05D004729 9.5e-236 821.2 840 49.3
CAN.G1034.45 Capsicum annuum HOM05D004082 ORTHO05D004729 1.2e-235 820.8 840 50.0
Cpa.g.sc48.57 Carica papaya HOM05D004082 ORTHO05D004729 1.2e-235 820.8 900 47.1
arahy.Tifrunner.gnm1.ann1.HF1TD9 Arachis hypogaea HOM05D004082 ORTHO05D004729 1.6e-235 820.5 796 51.9
DCAR_022172 Daucus carota HOM05D004082 ORTHO05D004729 3.6e-235 819.3 848 49.4
CANSAT54G2367 Cannabis sativa HOM05D004082 ORTHO05D004729 4.7e-235 818.9 848 50.2
FAN05G5148 Fragaria x ananassa HOM05D004082 ORTHO05D004729 4.7e-235 818.9 849 50.1
ClCG03G016970 Citrullus lanatus HOM05D004082 ORTHO05D004729 8.0e-235 818.1 870 49.0
TWI56G0720 Tripterygium wilfordii HOM05D004082 ORTHO05D004729 8.0e-235 818.1 842 50.2
TWI56G1006 Tripterygium wilfordii HOM05D004082 ORTHO05D004729 4.0e-234 815.8 846 49.9
Lsat_1_v5_gn_9_86081 Lactuca sativa HOM05D004082 ORTHO05D004729 5.2e-234 815.5 848 48.7
Sc16g0008480 Simmondsia chinensis HOM05D004082 ORTHO05D004729 5.2e-234 815.5 843 49.1
PGR031G3794 Punica granatum HOM05D004082 ORTHO05D004729 6.8e-234 815.1 843 49.5
Medtr1g082890 Medicago truncatula HOM05D004082 ORTHO05D004729 8.9e-234 814.7 850 49.6
Thhalv10006730m.g Eutrema salsugineum HOM05D004082 ORTHO05D004729 9.8e-233 811.2 858 49.9
ECA236G4884 Erigeron canadensis HOM05D004082 ORTHO05D004729 3.7e-232 809.3 862 48.1
Prupe.6G325400 Prunus persica HOM05D004082 ORTHO05D004729 3.2e-231 806.2 879 48.1
AUR62000827 Chenopodium quinoa HOM05D004082 ORTHO05D004729 4.1e-231 805.8 841 49.9
AUR62005147 Chenopodium quinoa HOM05D004082 ORTHO05D004729 4.1e-231 805.8 836 49.8
MD12G1218900 Malus domestica HOM05D004082 ORTHO05D004729 7.0e-231 805.1 843 48.8
RhsimUnG0226200 Rhododendron simsii HOM05D004082 ORTHO05D004729 2.7e-230 803.1 803 50.9
FAN09G0543 Fragaria x ananassa HOM05D004082 ORTHO05D004729 1.7e-229 800.4 785 51.3
unitig_52.g17387 Utricularia gibba HOM05D004082 ORTHO05D004729 4.3e-228 795.8 1129 41.2
Nn1g02247 Nelumbo nucifera HOM05D004082 ORTHO05D004729 3.6e-227 792.7 842 48.2
Migut.B01033 Erythranthe guttata HOM05D004082 ORTHO05D004729 5.2e-226 788.9 835 48.7
BcaC07g38468 Brassica carinata HOM05D004082 ORTHO05D004729 9.8e-225 784.6 893 46.4
vmacro05017 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 3.7e-224 782.7 842 48.5
AagrBONN_evm.TU.Sc2ySwM_368.1060 Anthoceros agrestis HOM05D004082 ORTHO05D004729 1.9e-223 780.4 893 46.6
Hund21813 Selenicereus undatus HOM05D004082 ORTHO05D004729 5.0e-221 772.3 841 48.3
Nitab4.5_0000137g0200 Nicotiana tabacum HOM05D004082 ORTHO05D004729 1.1e-218 764.6 841 47.3
vmacro22529 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 1.4e-218 764.2 747 51.7
BcaC07g38465 Brassica carinata HOM05D004082 ORTHO05D004729 4.0e-218 762.7 842 48.5
Gohir.A11G265200 Gossypium hirsutum HOM05D004082 ORTHO05D004729 2.0e-217 760.4 718 52.2
BcaC05g24752 Brassica carinata HOM05D004082 ORTHO05D004729 3.4e-217 759.6 841 47.6
SHI18140 Sapria himalayana HOM05D004082 ORTHO05D004729 7.5e-217 758.4 911 45.7
BraA06t23793Z Brassica rapa HOM05D004082 ORTHO05D004729 1.9e-212 743.8 697 53.2
Gohir.D11G275400 Gossypium hirsutum HOM05D004082 ORTHO05D004729 2.0e-209 733.8 695 51.9
Gohir.A13G107600 Gossypium hirsutum HOM05D004082 ORTHO05D004729 4.4e-209 732.6 732 50.4
ATR0626G266 Amborella trichopoda HOM05D004082 ORTHO05D004729 7.3e-204 715.3 808 46.3
COL.COLO4_13463 Corchorus olitorius HOM05D004082 ORTHO05D004729 2.6e-201 706.8 861 45.3
Migut.O00505 Erythranthe guttata HOM05D004082 ORTHO05D004729 7.6e-185 652.1 925 40.1
Ca_09358_v3 Cicer arietinum L. HOM05D004082 ORTHO05D004729 3.0e-181 640.2 635 50.2
Gorai.013G124100 Gossypium raimondii HOM05D004082 ORTHO05D004729 6.0e-174 615.9 650 48.9
CDE05G1313 Ceratophyllum demersum HOM05D004082 ORTHO05D004729 3.9e-165 586.6 529 52.9
Lj9A80G16 Lonicera japonica HOM05D004082 ORTHO05D004729 3.8e-160 570.1 607 47.4
Nitab4.5_0003227g0010 Nicotiana tabacum HOM05D004082 ORTHO05D004729 2.4e-122 444.5 403 53.3
Nitab4.5_0003227g0030 Nicotiana tabacum HOM05D004082 ORTHO05D004729 4.1e-106 390.6 434 47.5
PRCOL_00002375 Prasinoderma coloniale HOM05D004082 ORTHO05D004729 2.3e-72 278.5 648 32.7
MBI17_g12862_MAGBIO Magnolia biondii HOM05D004082 ORTHO05D004729 1.3e-62 246.1 309 44.0
Atru.chr2.402 Acer truncatum HOM05D004082 ORTHO05D004729 4.2e-58 231.1 238 51.3
QL03p006635 Quercus lobata HOM05D004082 ORTHO05D004729 2.1e-57 228.8 351 38.7
Cfa025543 Carpinus fangiana HOM05D004082 ORTHO05D004729 6.5e-51 207.2 808 24.8
QL03p006592 Quercus lobata HOM05D004082 ORTHO05D004729 1.1e-50 206.5 240 46.7
SEGI_00836 Sequoiadendron giganteum HOM05D004082 ORTHO05D004729 6.1e-49 200.7 171 56.1
Gorai.013G124200 Gossypium raimondii HOM05D004082 ORTHO05D004729 3.0e-48 198.4 214 49.5
SEGI_31510 Sequoiadendron giganteum HOM05D004082 ORTHO05D004729 2.2e-46 192.2 210 48.1
Atru.chr1.89 Acer truncatum HOM05D004082 ORTHO05D004729 2.8e-38 165.2 155 54.8
CAN.G623.33 Capsicum annuum HOM05D004082 ORTHO05D004729 1.8e-37 162.5 184 44.0
Lj9A80G18 Lonicera japonica HOM05D004082 ORTHO05D004729 4.5e-36 157.9 223 40.4
CDE05G2291 Ceratophyllum demersum HOM05D004082 ORTHO05D004729 3.3e-31 141.7 165 44.8
QL03p006553 Quercus lobata HOM05D004082 ORTHO05D004729 9.1e-29 133.7 352 29.8
CBR_g49561 Chara braunii HOM05D000019 ORTHO05D000353 3.2e-26 125.2 183 38.8
arahy.Tifrunner.gnm1.ann1.3W7GTE Arachis hypogaea HOM05D004082 ORTHO05D004729 4.0e-24 118.2 133 48.1
SGA_v2.0_scaffold54G19617 Striga asiatica HOM05D004082 ORTHO05D004729 7.5e-23 114.0 148 41.2
Cre11.g478184 Chlamydomonas reinhardtii HOM05D004082 ORTHO05D004729 2.3e-16 92.4 392 26.3
CAN.G623.34 Capsicum annuum HOM05D004082 ORTHO05D004729 1.7e-14 86.3 59 62.7
Cfa024522 Carpinus fangiana HOM05D004082 ORTHO05D004729 6.3e-14 84.3 318 26.1
CDE05G1624 Ceratophyllum demersum HOM05D004082 ORTHO05D004729 1.4e-13 83.2 98 44.9
SGA_v2.0_scaffold54G19618 Striga asiatica HOM05D004082 ORTHO05D004729 3.2e-10 72.0 121 34.7
VMungo1127G1159 Vigna mungo HOM05D004082 ORTHO05D004729 5.7e-07 61.2 96 36.5
Atru.chr1.88 Acer truncatum HOM05D004082 ORTHO05D004729 8.3e-06 57.4 169 26.6


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