Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23077 Chara braunii HOM05D004148 ORTHO05D004709 0.0e+00 3854.3 2076 100.0
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 3.6e-47 195.7 1512 25.0
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 5.1e-33 148.7 1566 23.8
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 5.2e-30 138.7 234 36.8
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 4.6e-26 125.6 254 33.1
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 6.0e-26 125.2 233 34.3
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.3e-25 124.0 213 36.6
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 1.7e-25 123.6 227 36.1
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 2.3e-25 123.2 342 31.9
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 3.0e-25 122.9 213 36.6
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 5.1e-25 122.1 267 34.5
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 5.1e-25 122.1 211 35.5
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 6.6e-25 121.7 220 35.0
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 8.6e-25 121.3 204 37.3
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 1.9e-24 120.2 234 34.2
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 1.9e-24 120.2 274 31.4
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 2.5e-24 119.8 323 31.6
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 2.5e-24 119.8 298 30.9
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 5.6e-24 118.6 232 34.9
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 5.6e-24 118.6 213 34.7
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 5.6e-24 118.6 225 34.7
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 5.6e-24 118.6 233 34.3
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 7.3e-24 118.2 283 30.4
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 9.6e-24 117.9 289 30.4
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 9.6e-24 117.9 224 34.4
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 1.2e-23 117.5 363 27.8
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 1.6e-23 117.1 258 32.9
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 2.8e-23 116.3 215 33.5
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 2.8e-23 116.3 206 35.4
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 3.6e-23 115.9 283 30.0
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 3.6e-23 115.9 207 34.8
Zm00001eb428880 Zea mays HOM05D004148 ORTHO05D004709 3.6e-23 115.9 217 35.0
Carub.0005s0933 Capsella rubella HOM05D004148 ORTHO05D004709 4.7e-23 115.5 216 34.7
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 4.7e-23 115.5 213 34.7
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 6.2e-23 115.2 213 34.3
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 6.2e-23 115.2 224 33.9
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 8.1e-23 114.8 214 33.2
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 8.1e-23 114.8 213 36.6
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 8.1e-23 114.8 211 33.2
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 8.1e-23 114.8 216 35.6
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 8.1e-23 114.8 224 34.8
CSS0008927 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 1.1e-22 114.4 205 37.1
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 1.1e-22 114.4 216 34.3
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 1.1e-22 114.4 209 34.4
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 1.8e-22 113.6 272 32.0
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 1.8e-22 113.6 234 33.8
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 3.1e-22 112.8 252 31.7
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 4.0e-22 112.5 347 28.5
vmacro04062 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 4.0e-22 112.5 215 34.9
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 5.2e-22 112.1 357 31.4
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 5.2e-22 112.1 262 32.1
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 5.2e-22 112.1 256 32.8
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 6.8e-22 111.7 222 37.4
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 6.8e-22 111.7 224 33.0
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 8.9e-22 111.3 229 34.9
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 2.0e-21 110.2 213 35.7
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 2.6e-21 109.8 263 30.8
SEGI_18042 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 2.6e-21 109.8 126 43.7
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 3.4e-21 109.4 280 30.4
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 4.4e-21 109.0 213 35.2
CiPaw.13G126900 Carya illinoinensis HOM05D004148 ORTHO05D004709 4.4e-21 109.0 251 31.9
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 4.4e-21 109.0 203 37.4
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 5.8e-21 108.6 290 29.7
CSS0002631 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 7.6e-21 108.2 202 36.6
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 7.6e-21 108.2 199 37.2
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 7.6e-21 108.2 243 31.7
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 1.3e-20 107.5 199 34.7
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 2.2e-20 106.7 199 33.7
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 2.2e-20 106.7 321 30.8
CSS0039701 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 3.8e-20 105.9 347 28.5
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 4.9e-20 105.5 349 30.1
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 6.4e-20 105.1 216 31.9
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 6.4e-20 105.1 268 28.7
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 8.4e-20 104.8 265 32.8
CSS0039756 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 8.4e-20 104.8 154 42.2
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 8.4e-20 104.8 340 28.2
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 8.4e-20 104.8 196 35.2
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 2.4e-19 103.2 199 36.2
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 2.4e-19 103.2 244 31.6
SMO172G0086 Selaginella moellendorffii HOM05D004148 ORTHO05D004709 2.4e-19 103.2 155 40.6
unitig_21.g20311 Utricularia gibba HOM05D004148 ORTHO05D004709 3.2e-19 102.8 287 28.9
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 4.2e-19 102.4 364 27.7
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 7.1e-19 101.7 266 30.1
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 7.1e-19 101.7 340 27.9
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 9.3e-19 101.3 266 30.1
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 9.3e-19 101.3 266 30.5
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 9.3e-19 101.3 266 30.1
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 9.3e-19 101.3 266 30.1
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 9.3e-19 101.3 359 27.3
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 1.6e-18 100.5 277 29.2
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 1.6e-18 100.5 225 35.1
Eucgr.B03795 Eucalyptus grandis HOM05D004148 ORTHO05D004709 2.1e-18 100.1 344 29.4
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 4.6e-18 99.0 216 31.0
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 6.0e-18 98.6 193 36.3
CARHR108980 Cardamine hirsuta HOM05D004148 ORTHO05D004709 7.8e-18 98.2 325 29.8
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 1.7e-17 97.1 210 33.3
arahy.Tifrunner.gnm1.ann1.SF9HJV Arachis hypogaea HOM05D004148 ORTHO05D004709 2.3e-17 96.7 351 28.5
FvH4_3g27030 Fragaria vesca HOM05D004148 ORTHO05D004709 8.7e-17 94.7 194 35.1
A06p26680 Brassica napus HOM05D004148 ORTHO05D004709 1.5e-16 94.0 138 40.6
MD03G1162400 Malus domestica HOM05D004148 ORTHO05D004709 3.3e-16 92.8 366 27.6
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 4.3e-16 92.4 197 32.5
BolSC21t60233H Brassica oleracea HOM05D004148 ORTHO05D004709 4.3e-16 92.4 324 28.4
AUR62020189 Chenopodium quinoa HOM05D004148 ORTHO05D004709 4.3e-16 92.4 319 30.4
Haze_23628 Corylus avellana HOM05D004148 ORTHO05D004709 5.6e-16 92.0 318 29.2
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 9.6e-16 91.3 325 28.9
Cpa.g.sc103.97 Carica papaya HOM05D004148 ORTHO05D004709 1.3e-15 90.9 130 41.5
MD03G1162300 Malus domestica HOM05D004148 ORTHO05D004709 1.6e-15 90.5 199 33.7
CARHR289540 Cardamine hirsuta HOM05D004148 ORTHO05D004709 1.4e-14 87.4 351 26.8
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 1.4e-14 87.4 140 41.4
FvH4_3g27031 Fragaria vesca HOM05D004148 ORTHO05D004709 4.0e-14 85.9 157 35.0
CDE07G1769 Ceratophyllum demersum HOM05D004148 ORTHO05D004709 9.0e-14 84.7 334 27.2
AUR62001591 Chenopodium quinoa HOM05D004148 ORTHO05D004709 1.5e-13 84.0 222 32.4
HPP92_019532 Vanilla planifolia HOM05D004148 ORTHO05D004709 1.3e-12 80.9 322 26.7
BraA06t25600Z Brassica rapa HOM05D004148 ORTHO05D004709 5.4e-11 75.5 104 42.3
unitig_21.g20312 Utricularia gibba HOM05D004148 ORTHO05D004709 1.2e-10 74.3 127 36.2
Hma1.2p1_2711F.1_g327330 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 1.6e-10 73.9 109 38.5
Cpa.g.sc103.96 Carica papaya HOM05D004148 ORTHO05D004709 3.5e-10 72.8 150 32.0
SHI25295 Sapria himalayana HOM05D004148 ORTHO05D004709 1.3e-09 70.9 106 38.7
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 9.6e-08 64.7 178 32.0
PRCOL_00000976 Prasinoderma coloniale HOM05D000880 ORTHO05D007053 1.3e-07 64.3 169 30.2
Migut.D00148 Erythranthe guttata HOM05D000880 ORTHO05D007053 3.6e-07 62.8 156 32.7
Lsat_1_v5_gn_8_164240 Lactuca sativa HOM05D000880 ORTHO05D007053 8.1e-07 61.6 156 32.1
ECA247G4025 Erigeron canadensis HOM05D000880 ORTHO05D007053 3.1e-06 59.7 156 32.7
ECA236G1870 Erigeron canadensis HOM05D000880 ORTHO05D007053 4.0e-06 59.3 157 31.8
SHI25291 Sapria himalayana HOM05D004148 ORTHO05D004709 5.3e-06 58.9 64 43.8
Dinv33058 Davidia involucrata HOM05D000880 ORTHO05D007053 6.9e-06 58.5 162 33.3


User provided reference genes

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