Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g22400 Chara braunii HOM05D004341 ORTHO05D005075 8.1e-121 437.2 236 100.0
Pp3c14_26520 Physcomitrium patens HOM05D004341 ORTHO05D005075 6.8e-43 178.3 210 54.8
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 2.0e-39 166.8 126 66.7
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 2.3e-38 163.3 126 65.9
Mapoly0006s0068 Marchantia polymorpha HOM05D004341 ORTHO05D005075 2.9e-38 162.9 122 65.6
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 6.6e-38 161.8 126 62.7
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 6.6e-38 161.8 126 62.7
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 1.1e-37 161.0 126 62.7
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 1.5e-37 160.6 126 65.1
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 1.5e-37 160.6 126 63.5
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 1.9e-37 160.2 126 63.5
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.9e-37 160.2 126 63.5
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 1.9e-37 160.2 124 65.3
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 2.5e-37 159.8 124 65.3
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 4.3e-37 159.1 126 61.9
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 4.3e-37 159.1 126 63.5
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 5.6e-37 158.7 126 62.7
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 9.5e-37 157.9 124 62.9
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 9.5e-37 157.9 126 58.7
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 62.7
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 62.7
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 62.7
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 59.5
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 62.7
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 58.7
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 1.2e-36 157.5 126 58.7
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 1.6e-36 157.1 126 61.9
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 1.6e-36 157.1 125 62.4
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 1.6e-36 157.1 125 59.2
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 2.1e-36 156.8 126 61.1
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 2.8e-36 156.4 126 61.9
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 2.8e-36 156.4 126 61.9
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 2.8e-36 156.4 126 62.7
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 2.8e-36 156.4 126 62.7
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 4.7e-36 155.6 126 62.7
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 4.7e-36 155.6 126 59.5
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 4.7e-36 155.6 126 61.1
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 8.0e-36 154.8 127 63.0
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 8.0e-36 154.8 125 61.6
DCAR_007769 Daucus carota HOM05D004341 ORTHO05D005075 8.0e-36 154.8 122 63.1
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 8.0e-36 154.8 126 62.7
SMO115G0310 Selaginella moellendorffii HOM05D004341 ORTHO05D005075 1.0e-35 154.5 101 69.3
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 1.8e-35 153.7 126 60.3
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 2.3e-35 153.3 126 58.7
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 2.3e-35 153.3 126 58.7
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 3.0e-35 152.9 175 54.3
CANSAT78G0611 Cannabis sativa HOM05D004341 ORTHO05D005075 4.0e-35 152.5 107 67.3
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 5.2e-35 152.1 126 58.7
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 8.9e-35 151.4 126 61.1
Potri.001G073500 Populus trichocarpa HOM05D004341 ORTHO05D005075 8.9e-35 151.4 126 60.3
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 8.9e-35 151.4 107 69.2
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 8.9e-35 151.4 126 61.1
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 1.5e-34 150.6 126 60.3
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 1.5e-34 150.6 126 61.1
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 2.0e-34 150.2 126 59.5
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 2.0e-34 150.2 126 59.5
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 2.6e-34 149.8 126 57.1
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 2.6e-34 149.8 127 63.0
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 2.6e-34 149.8 131 59.5
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 3.4e-34 149.4 126 58.7
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 3.4e-34 149.4 126 57.9
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 4.4e-34 149.1 126 59.5
Haze_05182 Corylus avellana HOM05D004341 ORTHO05D005075 4.4e-34 149.1 105 67.6
Lj3g0018794 Lotus japonicus HOM05D004341 ORTHO05D005075 4.4e-34 149.1 126 58.7
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 4.4e-34 149.1 126 58.7
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 4.4e-34 149.1 126 57.9
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 4.4e-34 149.1 126 57.9
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 4.4e-34 149.1 126 60.3
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 5.7e-34 148.7 126 60.3
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 5.7e-34 148.7 126 60.3
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 5.7e-34 148.7 126 60.3
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 7.5e-34 148.3 126 59.5
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 9.8e-34 147.9 185 53.5
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 9.8e-34 147.9 107 64.5
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 1.3e-33 147.5 126 59.5
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 1.3e-33 147.5 104 69.2
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 1.3e-33 147.5 126 58.7
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 1.7e-33 147.1 126 60.3
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 1.7e-33 147.1 107 63.6
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 2.9e-33 146.4 126 57.9
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 4.9e-33 145.6 126 59.5
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 4.9e-33 145.6 126 58.7
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 6.4e-33 145.2 107 65.4
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 6.4e-33 145.2 126 58.7
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 6.4e-33 145.2 107 66.4
Sc19g0001970 Simmondsia chinensis HOM05D004341 ORTHO05D005075 8.3e-33 144.8 105 66.7
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 1.1e-32 144.4 107 61.7
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 1.8e-32 143.7 197 47.7
Thhalv10026240m.g Eutrema salsugineum HOM05D004341 ORTHO05D005075 2.4e-32 143.3 107 64.5
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 2.4e-32 143.3 105 66.7
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 3.2e-32 142.9 124 57.3
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 5.4e-32 142.1 107 65.4
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 5.4e-32 142.1 126 57.9
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 5.4e-32 142.1 107 65.4
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 5.4e-32 142.1 126 57.9
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 5.4e-32 142.1 126 55.6
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 5.4e-32 142.1 126 56.3
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 7.0e-32 141.7 107 63.6
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 7.0e-32 141.7 107 62.6
CARHR227110 Cardamine hirsuta HOM05D004341 ORTHO05D005075 9.2e-32 141.4 107 63.6
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 9.2e-32 141.4 194 51.0
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 9.2e-32 141.4 103 65.0
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 1.2e-31 141.0 107 65.4
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 2.7e-31 139.8 106 63.2
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 2.7e-31 139.8 106 63.2
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 3.5e-31 139.4 106 62.3
AT4G20280 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 5.9e-31 138.7 126 57.1
AL7G33620 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 7.8e-31 138.3 107 63.6
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 7.8e-31 138.3 106 62.3
Carub.0007s2089 Capsella rubella HOM05D004341 ORTHO05D005075 7.8e-31 138.3 107 63.6
BcaB04g18416 Brassica carinata HOM05D004341 ORTHO05D005075 1.0e-30 137.9 107 58.9
Sp7g18640 Schrenkiella parvula HOM05D004341 ORTHO05D005075 1.0e-30 137.9 107 61.7
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 3.0e-30 136.3 111 61.3
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 3.9e-30 136.0 121 55.4
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 6.6e-30 135.2 108 60.2
AT1G20000 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 1.1e-29 134.4 107 60.7
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 1.5e-29 134.0 115 57.4
AL1G32730 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 2.5e-29 133.3 107 59.8
COL.COLO4_10402 Corchorus olitorius HOM05D004341 ORTHO05D005075 2.5e-29 133.3 110 61.8
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 2.5e-29 133.3 186 51.1
THA.LOC104812926 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 4.3e-29 132.5 108 60.2
Eucgr.G01564 Eucalyptus grandis HOM05D004341 ORTHO05D005075 7.3e-29 131.7 94 69.1
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 7.3e-29 131.7 125 52.0
BcaB04g20259 Brassica carinata HOM05D004341 ORTHO05D005075 2.1e-28 130.2 109 56.9
CiPaw.02G184500 Carya illinoinensis HOM05D004341 ORTHO05D005075 3.6e-28 129.4 125 53.6
BcaB04g20244 Brassica carinata HOM05D004341 ORTHO05D005075 4.7e-28 129.0 108 57.4
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 1.5e-26 124.0 133 49.6
FAN07G2754 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.6e-26 123.2 108 60.2
BcaC09g49417 Brassica carinata HOM05D004341 ORTHO05D005075 1.7e-25 120.6 110 56.4
BolC1t03652H Brassica oleracea HOM05D004341 ORTHO05D005075 2.9e-25 119.8 99 58.6
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 3.0e-22 109.8 98 57.1
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 5.0e-22 109.0 101 54.5
Sabra01G0051800 Salix brachista HOM05D004341 ORTHO05D005075 4.3e-21 105.9 84 63.1
TPR.G30192 Trifolium pratense HOM05D004341 ORTHO05D005075 7.3e-21 105.1 110 49.1
Haze_17072 Corylus avellana HOM05D000046 ORTHO05D005075 4.7e-20 102.4 83 59.0
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 2.6e-18 96.7 92 52.2
BcaB03g11664 Brassica carinata HOM05D004341 ORTHO05D005075 9.8e-18 94.7 106 50.9
A08p14740 Brassica napus HOM05D004341 ORTHO05D005075 3.7e-17 92.8 169 37.9
BraA08t33460Z Brassica rapa HOM05D004341 ORTHO05D005075 3.7e-17 92.8 169 37.9
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 3.7e-17 92.8 84 52.4
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 1.4e-16 90.9 84 53.6
BcaB04g20257 Brassica carinata HOM05D004341 ORTHO05D005075 2.4e-16 90.1 79 58.2
BcaC01g00664 Brassica carinata HOM05D004341 ORTHO05D005075 3.2e-16 89.7 112 43.8
FAN11G3831 Fragaria x ananassa HOM05D004341 ORTHO05D005075 3.5e-15 86.3 80 52.5
PRCOL_00001421 Prasinoderma coloniale HOM05D004341 ORTHO05D005075 4.6e-15 85.9 106 44.3
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 6.0e-15 85.5 84 51.2
Medtr0085s0030 Medicago truncatula HOM05D004341 ORTHO05D005075 5.6e-13 79.0 84 47.6
Potri.003G157450 Populus trichocarpa HOM05D004341 ORTHO05D005075 2.8e-12 76.6 45 77.8
MCO01G288 Micromonas commoda HOM05D004341 ORTHO05D005075 2.6e-10 70.1 95 43.2
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 2.2e-09 67.0 68 47.1
BolC3t20569H Brassica oleracea HOM05D001435 ORTHO05D001304 2.9e-09 66.6 52 61.5
Cre01.g011350 Chlamydomonas reinhardtii HOM05D004341 ORTHO05D005075 7.8e-07 58.5 173 30.6
TPR.G20312 Trifolium pratense HOM05D004341 ORTHO05D005075 1.7e-06 57.4 41 61.0


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