Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g22069 Chara braunii HOM05D001891 ORTHO05D004048 6.3e-106 387.5 202 100.0
Mapoly0037s0074 Marchantia polymorpha HOM05D001891 ORTHO05D004048 9.0e-28 127.9 271 33.2
PGR142G0845 Punica granatum HOM05D001891 ORTHO05D004048 3.3e-22 109.4 236 34.3
AagrBONN_evm.TU.Sc2ySwM_362.2694 Anthoceros agrestis HOM05D001891 ORTHO05D004048 7.4e-22 108.2 148 48.0
MBI06_g15670_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D004048 1.4e-20 104.0 267 28.5
FvH4_6g43550 Fragaria vesca HOM05D001891 ORTHO05D004048 1.8e-20 103.6 268 30.6
CiPaw.04G117900 Carya illinoinensis HOM05D001891 ORTHO05D004048 2.4e-20 103.2 267 30.3
MD17G1092700 Malus domestica HOM05D001891 ORTHO05D004048 2.4e-20 103.2 268 30.6
SEGI_12996 Sequoiadendron giganteum HOM05D001891 ORTHO05D004048 3.1e-20 102.8 268 29.9
Pp3c3_16800 Physcomitrium patens HOM05D001891 ORTHO05D004048 4.0e-20 102.4 275 31.3
Pp3c3_16810 Physcomitrium patens HOM05D001891 ORTHO05D004048 4.0e-20 102.4 275 31.3
Prupe.3G220500 Prunus persica HOM05D001891 ORTHO05D004048 4.0e-20 102.4 267 31.1
VMungo1080G1612 Vigna mungo HOM05D001891 ORTHO05D004048 6.9e-20 101.7 270 30.7
RcHm_v2.0_Chr2g0160081 Rosa chinensis HOM05D001891 ORTHO05D004048 1.2e-19 100.9 266 29.7
MSTRG.14154 Avicennia marina HOM05D001891 ORTHO05D004048 2.0e-19 100.1 248 34.3
CSS0049956 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D004048 2.0e-19 100.1 267 29.2
Glyma.13G306700 Glycine max HOM05D001891 ORTHO05D004048 2.0e-19 100.1 266 29.3
Eucgr.K00861 Eucalyptus grandis HOM05D001891 ORTHO05D004048 5.8e-19 98.6 273 29.3
FAN09G3447 Fragaria x ananassa HOM05D001891 ORTHO05D004048 5.8e-19 98.6 268 31.3
MD09G1105000 Malus domestica HOM05D001891 ORTHO05D004048 5.8e-19 98.6 267 29.6
Hma1.2p1_0613F.1_g189170 Hydrangea macrophylla HOM05D001891 ORTHO05D004048 7.6e-19 98.2 267 29.2
TAR629G3333 Trochodendron aralioides HOM05D001891 ORTHO05D004048 7.6e-19 98.2 270 28.9
MSTRG.12288 Avicennia marina HOM05D001891 ORTHO05D004048 1.0e-18 97.8 236 32.6
Ca_27743_v3 Cicer arietinum L. HOM05D001891 ORTHO05D004048 1.0e-18 97.8 267 30.3
TWI18G0897 Tripterygium wilfordii HOM05D001891 ORTHO05D004048 1.3e-18 97.4 267 28.8
GSVIVG01030625001 Vitis vinifera HOM05D001891 ORTHO05D004048 1.3e-18 97.4 268 28.4
CANSAT64G0421 Cannabis sativa HOM05D001891 ORTHO05D004048 1.7e-18 97.1 270 31.5
FAN14G5299 Fragaria x ananassa HOM05D001891 ORTHO05D005832 1.7e-18 97.1 265 29.8
Glyma.12G195800 Glycine max HOM05D001891 ORTHO05D004048 2.9e-18 96.3 267 29.2
ClCG02G008440 Citrullus lanatus HOM05D001891 ORTHO05D004048 3.8e-18 95.9 267 27.7
Rhsim04G0056600 Rhododendron simsii HOM05D001891 ORTHO05D004048 3.8e-18 95.9 269 29.7
ATR0618G228 Amborella trichopoda HOM05D001891 ORTHO05D004048 4.9e-18 95.5 266 28.9
CSS0024189 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D004048 4.9e-18 95.5 269 29.0
MELO3C018802.2 Cucumis melo HOM05D001891 ORTHO05D004048 6.5e-18 95.1 269 28.6
CiPaw.03G163000 Carya illinoinensis HOM05D001891 ORTHO05D004048 8.4e-18 94.7 269 29.7
Manes.12G078400 Manihot esculenta HOM05D001891 ORTHO05D004048 8.4e-18 94.7 266 27.8
Nitab4.5_0000631g0040 Nicotiana tabacum HOM05D001891 ORTHO05D004048 8.4e-18 94.7 262 30.5
Sed0013568 Sechium edule HOM05D001891 ORTHO05D004048 8.4e-18 94.7 267 28.5
TPR.G4167 Trifolium pratense HOM05D001891 ORTHO05D004048 8.4e-18 94.7 270 30.0
Sed0022558 Sechium edule HOM05D001891 ORTHO05D004048 1.1e-17 94.4 269 30.1
Lj3g0025447 Lotus japonicus HOM05D001891 ORTHO05D004048 1.4e-17 94.0 267 28.1
PSO675G1171 Papaver somniferum HOM05D001891 ORTHO05D004048 1.4e-17 94.0 267 29.2
Lalb_Chr01g0005561 Lupinus albus HOM05D001891 ORTHO05D004048 1.9e-17 93.6 267 30.0
Actinidia30510 Actinidia chinensis HOM05D001891 ORTHO05D004048 2.5e-17 93.2 268 27.6
CsaV3_2G035190 Cucumis sativus L. HOM05D001891 ORTHO05D004048 2.5e-17 93.2 267 27.7
ClCG02G001770 Citrullus lanatus HOM05D001891 ORTHO05D004048 3.2e-17 92.8 273 27.8
CAN.G80.19 Capsicum annuum HOM05D001891 ORTHO05D004048 4.2e-17 92.4 267 29.6
Oeu041959.1 Olea europaea HOM05D001891 ORTHO05D004048 4.2e-17 92.4 244 29.9
Psat5g265320 Pisum sativum HOM05D001891 ORTHO05D004048 4.2e-17 92.4 269 29.4
CAN.G921.6 Capsicum annuum HOM05D001891 ORTHO05D004048 5.5e-17 92.0 268 28.7
Ciclev10016204m.g Citrus clementina HOM05D001891 ORTHO05D004048 5.5e-17 92.0 267 29.2
Migut.M00394 Erythranthe guttata HOM05D001891 ORTHO05D004048 5.5e-17 92.0 237 29.1
PSO541G4560 Papaver somniferum HOM05D001891 ORTHO05D004048 5.5e-17 92.0 267 29.2
arahy.Tifrunner.gnm1.ann1.6C63SS Arachis hypogaea HOM05D001891 ORTHO05D004048 7.1e-17 91.7 268 30.2
arahy.Tifrunner.gnm1.ann1.MDYX4P Arachis hypogaea HOM05D001891 ORTHO05D004048 7.1e-17 91.7 268 30.2
Dinv39686 Davidia involucrata HOM05D001891 ORTHO05D004048 7.1e-17 91.7 266 27.4
Gohir.D12G138400 Gossypium hirsutum HOM05D001891 ORTHO05D004048 7.1e-17 91.7 268 28.7
Cfa014439 Carpinus fangiana HOM05D001891 ORTHO05D005832 9.3e-17 91.3 241 30.7
Nn1g06995 Nelumbo nucifera HOM05D001891 ORTHO05D004048 9.3e-17 91.3 270 29.6
Sc12g0002390 Simmondsia chinensis HOM05D001891 ORTHO05D004048 9.3e-17 91.3 267 29.6
Gohir.D02G187000 Gossypium hirsutum HOM05D001891 ORTHO05D004048 1.6e-16 90.5 268 29.9
Sabra07G0098300 Salix brachista HOM05D001891 ORTHO05D004048 2.1e-16 90.1 270 28.5
Sopen07g026210 Solanum pennellii HOM05D001891 ORTHO05D004048 2.1e-16 90.1 268 28.7
Thecc.02G162400 Theobroma cacao HOM05D001891 ORTHO05D004048 2.1e-16 90.1 268 28.4
CDE07G1567 Ceratophyllum demersum HOM05D001891 ORTHO05D004048 2.7e-16 89.7 264 24.6
Gohir.A03G163600 Gossypium hirsutum HOM05D001891 ORTHO05D004048 2.7e-16 89.7 268 29.1
Gorai.005G209300 Gossypium raimondii HOM05D001891 ORTHO05D004048 2.7e-16 89.7 269 29.7
Phvul.005G113600 Phaseolus vulgaris HOM05D001891 ORTHO05D004048 2.7e-16 89.7 242 31.4
SalBow7G2009 Salvia bowleyana HOM05D001891 ORTHO05D004048 2.7e-16 89.7 263 29.3
Actinidia12501 Actinidia chinensis HOM05D001891 ORTHO05D004048 3.5e-16 89.4 265 28.3
Gorai.008G149900 Gossypium raimondii HOM05D001891 ORTHO05D004048 3.5e-16 89.4 269 29.0
SGA_v2.0_scaffold70G23420 Striga asiatica HOM05D001891 ORTHO05D004048 3.5e-16 89.4 249 29.7
SalBow1G3276 Salvia bowleyana HOM05D001891 ORTHO05D004048 4.6e-16 89.0 264 30.3
Solyc07g052600.3 Solanum lycopersicum HOM05D001891 ORTHO05D004048 6.0e-16 88.6 268 28.4
TWI75G1691 Tripterygium wilfordii HOM05D001891 ORTHO05D004048 6.0e-16 88.6 267 28.1
AUR62037141 Chenopodium quinoa HOM05D001891 ORTHO05D004048 7.9e-16 88.2 267 27.0
Haze_12898 Corylus avellana HOM05D001891 ORTHO05D004048 7.9e-16 88.2 263 29.7
CDE04G1330 Ceratophyllum demersum HOM05D001891 ORTHO05D004048 1.0e-15 87.8 265 26.4
TAR627G0099 Trochodendron aralioides HOM05D001891 ORTHO05D004048 1.0e-15 87.8 238 29.0
Duzib132G0769 Durio zibethinus HOM05D001891 ORTHO05D004048 1.3e-15 87.4 269 29.4
Sopen12g001680 Solanum pennellii HOM05D001891 ORTHO05D004048 1.3e-15 87.4 268 29.1
BraA03t13403Z Brassica rapa HOM05D001891 ORTHO05D004048 1.8e-15 87.0 268 27.2
Gohir.A12G134800 Gossypium hirsutum HOM05D001891 ORTHO05D004048 2.3e-15 86.7 269 29.4
A03p42500 Brassica napus HOM05D001891 ORTHO05D004048 3.0e-15 86.3 268 27.2
Nitab4.5_0005894g0030 Nicotiana tabacum HOM05D001891 ORTHO05D009433 3.0e-15 86.3 268 28.7
SMO356G0403 Selaginella moellendorffii HOM05D001891 ORTHO05D004048 3.0e-15 86.3 267 26.6
TAR629G0018 Trochodendron aralioides HOM05D001891 ORTHO05D004048 3.0e-15 86.3 268 25.7
Aa31LG8G8420 Aethionema arabicum HOM05D001891 ORTHO05D004048 3.9e-15 85.9 266 27.1
Lj3g0010899 Lotus japonicus HOM05D001891 ORTHO05D004048 3.9e-15 85.9 236 30.9
Lalb_Chr03g0028901 Lupinus albus HOM05D001891 ORTHO05D004048 3.9e-15 85.9 267 27.3
Nitab4.5_0006207g0030 Nicotiana tabacum HOM05D001891 ORTHO05D004048 5.1e-15 85.5 300 28.3
THA.LOC104802537 Tarenaya hassleriana HOM05D001891 ORTHO05D004048 6.7e-15 85.1 268 27.2
Cc05_g05140 Coffea canephora HOM05D001891 ORTHO05D004048 8.7e-15 84.7 266 27.4
unitig_21.g20003 Utricularia gibba HOM05D001891 ORTHO05D004048 8.7e-15 84.7 237 31.6
Duzib248G1135 Durio zibethinus HOM05D001891 ORTHO05D004048 1.1e-14 84.3 267 27.0
ECA233G3416 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.1e-14 84.3 241 29.9
HanXRQChr17g0560941 Helianthus annuus HOM05D001891 ORTHO05D004048 1.5e-14 84.0 236 30.1
Solyc12g005760.2 Solanum lycopersicum HOM05D001891 ORTHO05D004048 1.5e-14 84.0 268 28.0
Potri.007G121600 Populus trichocarpa HOM05D001891 ORTHO05D004048 1.9e-14 83.6 270 27.4
THA.LOC104808497 Tarenaya hassleriana HOM05D001891 ORTHO05D004048 1.9e-14 83.6 266 27.1
Actinidia32079 Actinidia chinensis HOM05D001891 ORTHO05D004048 2.5e-14 83.2 267 27.7
BcaC01g03476 Brassica carinata HOM05D001891 ORTHO05D004048 2.5e-14 83.2 271 27.3
C03p52060 Brassica napus HOM05D001891 ORTHO05D004048 2.5e-14 83.2 271 27.3
Lsat_1_v5_gn_8_129400 Lactuca sativa HOM05D001891 ORTHO05D004048 2.5e-14 83.2 236 29.7
BolC3t17487H Brassica oleracea HOM05D001891 ORTHO05D004048 3.3e-14 82.8 272 27.2
DCAR_019211 Daucus carota HOM05D001891 ORTHO05D004048 3.3e-14 82.8 268 28.7
Lsat_1_v5_gn_3_43721 Lactuca sativa HOM05D001891 ORTHO05D004048 3.3e-14 82.8 265 26.0
Sed0020603 Sechium edule HOM05D001891 ORTHO05D004048 4.3e-14 82.4 271 25.1
QL03p043045 Quercus lobata HOM05D001891 ORTHO05D004048 5.7e-14 82.0 271 25.8
arahy.Tifrunner.gnm1.ann1.NX9XDZ Arachis hypogaea HOM05D001891 ORTHO05D004048 7.4e-14 81.6 318 25.2
SGA_v2.0_scaffold49G18333 Striga asiatica HOM05D001891 ORTHO05D004048 7.4e-14 81.6 277 27.1
Lj8A122T60 Lonicera japonica HOM05D001891 ORTHO05D004048 9.6e-14 81.3 239 28.9
Potri.017G038800 Populus trichocarpa HOM05D001891 ORTHO05D004048 9.6e-14 81.3 269 26.8
Nitab4.5_0001176g0130 Nicotiana tabacum HOM05D001891 ORTHO05D009433 1.6e-13 80.5 265 28.3
Medtr2g088850 Medicago truncatula HOM05D001891 ORTHO05D004048 2.1e-13 80.1 271 28.0
Lj1A756G86 Lonicera japonica HOM05D001891 ORTHO05D004048 2.8e-13 79.7 234 28.2
A05p26910 Brassica napus HOM05D001891 ORTHO05D004048 3.7e-13 79.3 268 25.0
BraA05t21571Z Brassica rapa HOM05D001891 ORTHO05D004048 3.7e-13 79.3 268 25.0
PSO063G3135 Papaver somniferum HOM05D001891 ORTHO05D004048 4.8e-13 79.0 162 29.0
Sabra17G0025800 Salix brachista HOM05D001891 ORTHO05D004048 4.8e-13 79.0 269 26.4
AT3G21865 Arabidopsis thaliana HOM05D001891 ORTHO05D004048 6.2e-13 78.6 271 26.2
HPP92_009055 Vanilla planifolia HOM05D001891 ORTHO05D004048 8.2e-13 78.2 264 27.7
EL10Ac9g20654 Beta vulgaris HOM05D001891 ORTHO05D004048 1.1e-12 77.8 267 26.2
A01p33120 Brassica napus HOM05D001891 ORTHO05D004048 1.4e-12 77.4 272 26.8
C05p41520 Brassica napus HOM05D001891 ORTHO05D004048 1.4e-12 77.4 272 25.0
BolC5t32890H Brassica oleracea HOM05D001891 ORTHO05D004048 1.4e-12 77.4 272 25.0
BraA01t03435Z Brassica rapa HOM05D001891 ORTHO05D004048 1.4e-12 77.4 272 26.8
CARHR097820 Cardamine hirsuta HOM05D001891 ORTHO05D004048 2.4e-12 76.6 267 25.1
Actinidia00164 Actinidia chinensis HOM05D001891 ORTHO05D004048 3.1e-12 76.3 267 26.6
FAN02G0497 Fragaria x ananassa HOM05D001891 ORTHO05D005832 3.1e-12 76.3 146 37.0
Os04g0629000 Oryza sativa ssp. japonica HOM05D001891 ORTHO05D004048 3.1e-12 76.3 241 26.6
BcaB04g19187 Brassica carinata HOM05D001891 ORTHO05D004048 4.1e-12 75.9 266 24.4
BcaB06g26288 Brassica carinata HOM05D001891 ORTHO05D004048 5.3e-12 75.5 272 25.4
Thhalv10021287m.g Eutrema salsugineum HOM05D001891 ORTHO05D004048 5.3e-12 75.5 267 25.8
Zm00001eb431430 Zea mays HOM05D001891 ORTHO05D004048 5.3e-12 75.5 267 25.5
Ah.01g014600 Amaranthus hybridus HOM05D001891 ORTHO05D004048 6.9e-12 75.1 268 27.2
Sp3g19830 Schrenkiella parvula HOM05D001891 ORTHO05D004048 6.9e-12 75.1 267 24.3
Hund01141 Selenicereus undatus HOM05D001891 ORTHO05D004048 1.2e-11 74.3 252 27.8
vmacro12228 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 2.0e-11 73.6 233 30.0
DCAR_012959 Daucus carota HOM05D001891 ORTHO05D004048 2.6e-11 73.2 247 27.5
Zm00001eb066610 Zea mays HOM05D001891 ORTHO05D004048 2.6e-11 73.2 262 26.3
BcaC05g28120 Brassica carinata HOM05D001891 ORTHO05D004048 4.5e-11 72.4 241 26.1
Cpa.g.sc8.236 Carica papaya HOM05D001891 ORTHO05D004048 4.5e-11 72.4 218 29.8
Zm00001eb069570 Zea mays HOM05D001891 ORTHO05D004048 4.5e-11 72.4 236 26.3
HanXRQChr15g0479201 Helianthus annuus HOM05D001891 ORTHO05D004048 1.3e-10 70.9 235 28.1
C01p42350 Brassica napus HOM05D001891 ORTHO05D004048 1.7e-10 70.5 266 25.6
Carub.0003s2193 Capsella rubella HOM05D001891 ORTHO05D004048 2.2e-10 70.1 270 24.8
Dinv02385 Davidia involucrata HOM05D001891 ORTHO05D004048 2.2e-10 70.1 145 29.7
CsaV3_7G003770 Cucumis sativus L. HOM05D001891 ORTHO05D004048 2.9e-10 69.7 145 35.9
Dinv18531 Davidia involucrata HOM05D001891 ORTHO05D004048 2.9e-10 69.7 146 35.6
HanXRQChr10g0297471 Helianthus annuus HOM05D001891 ORTHO05D004048 2.9e-10 69.7 253 26.9
HPP92_004139 Vanilla planifolia HOM05D001891 ORTHO05D004048 2.9e-10 69.7 270 26.7
unitig_578.g16774 Utricularia gibba HOM05D001891 ORTHO05D004048 5.0e-10 68.9 237 27.4
BcaC09g49122 Brassica carinata HOM05D001891 ORTHO05D004048 6.5e-10 68.6 267 25.1
BolC1t04190H Brassica oleracea HOM05D001891 ORTHO05D004048 6.5e-10 68.6 267 25.1
QL08p033836 Quercus lobata HOM05D001891 ORTHO05D004048 6.5e-10 68.6 146 35.6
Atru.chr6.3149 Acer truncatum HOM05D001891 ORTHO05D004048 8.4e-10 68.2 166 31.3
COL.COLO4_12984 Corchorus olitorius HOM05D001891 ORTHO05D005832 1.1e-09 67.8 149 34.9
Oeu011080.1 Olea europaea HOM05D001891 ORTHO05D004048 1.4e-09 67.4 118 38.1
Os04g0672800 Oryza sativa ssp. japonica HOM05D001891 ORTHO05D004048 1.4e-09 67.4 262 24.4
Ah.01g003690 Amaranthus hybridus HOM05D001891 ORTHO05D004048 1.9e-09 67.0 50 58.0
AUR62025059 Chenopodium quinoa HOM05D001891 ORTHO05D004048 1.9e-09 67.0 148 31.8
BcaC09g49125 Brassica carinata HOM05D001891 ORTHO05D004048 2.5e-09 66.6 271 25.1
BcaC09g49127 Brassica carinata HOM05D001891 ORTHO05D004048 3.2e-09 66.2 234 26.5
Oeu052537.1 Olea europaea HOM05D001891 ORTHO05D004048 4.2e-09 65.9 145 31.7
arahy.Tifrunner.gnm1.ann1.CI1LQF Arachis hypogaea HOM05D001891 ORTHO05D004048 5.5e-09 65.5 290 25.9
MELO3C019235.2 Cucumis melo HOM05D001891 ORTHO05D004048 5.5e-09 65.5 159 28.9
Peaxi162Scf00007g01230 Petunia axillaris HOM05D001891 ORTHO05D004048 5.5e-09 65.5 147 36.1
Lsat_1_v5_gn_4_69321 Lactuca sativa HOM05D001891 ORTHO05D004048 7.1e-09 65.1 50 56.0
Sabra11G0073000 Salix brachista HOM05D001891 ORTHO05D004048 1.2e-08 64.3 50 54.0
Aa31LG9G2160 Aethionema arabicum HOM05D001891 ORTHO05D004048 1.6e-08 63.9 203 26.1
AL3G36020 Arabidopsis lyrata HOM05D001891 ORTHO05D004048 1.6e-08 63.9 291 24.1
vmacro09324 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 1.6e-08 63.9 145 32.4
Lj3A852T54 Lonicera japonica HOM05D001891 ORTHO05D004048 2.1e-08 63.5 145 32.4
Atru.chr8.691 Acer truncatum HOM05D001891 ORTHO05D004048 4.6e-08 62.4 50 50.0
Oeu052538.1 Olea europaea HOM05D001891 ORTHO05D004048 6.1e-08 62.0 50 52.0
Hma1.2p1_0439F.1_g153260 Hydrangea macrophylla HOM05D001891 ORTHO05D004048 1.8e-07 60.5 126 32.5
Migut.H01220 Erythranthe guttata HOM05D001891 ORTHO05D004048 2.3e-07 60.1 144 34.7
Aqoxy4G02099 Aquilegia oxysepala HOM05D001891 ORTHO05D004048 3.9e-07 59.3 159 26.4
Duzib052G0734 Durio zibethinus HOM05D001891 ORTHO05D004048 5.1e-07 58.9 145 33.8
Lalb_Chr14g0375711 Lupinus albus HOM05D001891 ORTHO05D004048 2.5e-06 56.6 101 35.6
CSS0016042 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D004048 3.3e-06 56.2 117 39.3
CSS0035637 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D004048 5.7e-06 55.5 117 39.3
SEGI_35415 Sequoiadendron giganteum HOM05D001891 ORTHO05D004048 7.4e-06 55.1 109 39.4
SEGI_18250 Sequoiadendron giganteum HOM05D001891 ORTHO05D004048 9.7e-06 54.7 50 44.0


User provided reference genes

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