Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 5.2e-200 701.0 410 100.0
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 1.9e-37 161.0 187 50.8
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 6.5e-33 146.0 185 47.0
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 5.0e-25 119.8 185 41.6
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 1.1e-24 118.6 185 41.1
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 1.9e-24 117.9 160 41.2
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 2.5e-24 117.5 186 43.0
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 6.1e-23 112.8 184 43.5
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 1.8e-22 111.3 184 43.5
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 1.8e-22 111.3 184 40.8
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 3.0e-22 110.5 185 43.8
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 3.9e-22 110.2 184 39.1
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 3.9e-22 110.2 184 40.8
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 3.9e-22 110.2 184 42.4
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 6.7e-22 109.4 184 42.9
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 6.7e-22 109.4 184 41.3
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 6.7e-22 109.4 183 39.9
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 6.7e-22 109.4 185 40.0
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 8.8e-22 109.0 184 42.9
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 8.8e-22 109.0 178 42.1
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 8.8e-22 109.0 187 41.7
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 8.8e-22 109.0 184 41.8
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 8.8e-22 109.0 183 42.6
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 8.8e-22 109.0 184 40.8
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 1.1e-21 108.6 184 43.5
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 2.0e-21 107.8 184 40.2
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 2.5e-21 107.5 184 42.4
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 2.5e-21 107.5 184 39.7
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 2.5e-21 107.5 184 42.9
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 3.3e-21 107.1 185 41.1
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 3.3e-21 107.1 178 43.3
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 4.3e-21 106.7 187 40.6
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 4.3e-21 106.7 186 41.9
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 4.3e-21 106.7 185 40.5
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 5.7e-21 106.3 184 40.2
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 7.4e-21 105.9 184 42.9
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 7.4e-21 105.9 184 39.7
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 7.4e-21 105.9 184 39.7
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 7.4e-21 105.9 184 40.2
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 7.4e-21 105.9 184 40.8
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 9.7e-21 105.5 184 40.2
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 9.7e-21 105.5 184 39.7
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 1.3e-20 105.1 184 42.4
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 1.3e-20 105.1 186 40.3
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 1.3e-20 105.1 184 40.2
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 1.3e-20 105.1 184 39.1
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 1.7e-20 104.8 184 39.7
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 1.7e-20 104.8 184 40.8
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 1.7e-20 104.8 185 40.0
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 2.2e-20 104.4 172 41.9
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 2.8e-20 104.0 184 41.3
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 3.7e-20 103.6 184 41.8
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 3.7e-20 103.6 184 41.8
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 3.7e-20 103.6 184 41.8
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 3.7e-20 103.6 184 41.8
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 3.7e-20 103.6 184 39.7
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 4.8e-20 103.2 187 39.0
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 4.8e-20 103.2 184 40.8
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 4.8e-20 103.2 184 41.3
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 6.3e-20 102.8 187 39.0
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 8.2e-20 102.4 187 39.0
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 1.4e-19 101.7 184 40.2
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 1.8e-19 101.3 166 40.4
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 1.8e-19 101.3 186 39.2
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 1.8e-19 101.3 184 40.2
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 4.1e-19 100.1 184 41.3
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 5.3e-19 99.8 194 39.7
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 5.3e-19 99.8 187 39.0
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 6.9e-19 99.4 184 40.8
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 1.2e-18 98.6 199 37.2
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 1.5e-18 98.2 184 38.6
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 1.5e-18 98.2 184 40.2
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 4.5e-18 96.7 186 39.2
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 7.7e-18 95.9 174 42.0
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 7.7e-18 95.9 168 38.7
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 2.2e-17 94.4 168 38.1
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.1e-16 92.0 173 36.4
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 4.2e-16 90.1 192 34.9
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 7.2e-16 89.4 177 37.3
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 7.2e-16 89.4 141 41.1
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 9.4e-16 89.0 86 59.3
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.2e-15 88.6 173 39.3
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 1.2e-15 88.6 173 39.3
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 1.2e-15 88.6 169 37.9
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.7e-15 87.4 173 38.7
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 2.7e-15 87.4 183 35.5
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 2.7e-15 87.4 167 38.3
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 4.7e-15 86.7 140 41.4
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 1.4e-14 85.1 155 36.1
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 1.8e-14 84.7 165 38.8
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 2.3e-14 84.3 232 31.9
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 3.0e-14 84.0 155 38.1
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.3e-13 80.5 145 37.2
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 4.4e-13 80.1 147 39.5
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 3.7e-12 77.0 155 35.5
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 1.8e-11 74.7 183 32.8
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 2.4e-11 74.3 165 30.9
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 1.6e-10 71.6 134 40.3
ATR0109G022 Amborella trichopoda HOM05D002102 ORTHO05D008242 4.5e-10 70.1 77 48.1
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 5.9e-10 69.7 133 38.3
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 2.5e-08 64.3 86 46.5
Actinidia31357 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.6e-07 61.6 86 45.3
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 1.6e-07 61.6 164 29.3
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 2.1e-07 61.2 144 37.5
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 3.6e-07 60.5 144 38.2
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 6.1e-07 59.7 171 31.0


User provided reference genes

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