Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g21120 Chara braunii HOM05D003893 ORTHO05D005167 0.0e+00 2063.5 1041 100.0
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 1.2e-83 315.8 965 29.5
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 3.0e-58 231.5 881 26.1
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 6.6e-58 230.3 880 26.6
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 1.5e-57 229.2 885 26.3
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 3.3e-57 228.0 849 28.0
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 7.3e-57 226.9 852 27.1
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 3.6e-56 224.6 891 25.3
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 1.1e-55 223.0 884 25.3
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 1.4e-55 222.6 880 26.2
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 1.4e-55 222.6 885 25.8
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 1.8e-55 222.2 882 25.6
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 6.9e-55 220.3 913 26.0
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 1.5e-54 219.2 881 25.7
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 1.5e-54 219.2 897 25.8
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 2.0e-54 218.8 879 26.3
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 2.0e-54 218.8 892 26.2
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 2.0e-54 218.8 906 25.5
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 2.6e-54 218.4 906 25.4
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 3.4e-54 218.0 921 25.1
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 3.4e-54 218.0 904 25.2
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 4.4e-54 217.6 879 25.8
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 4.4e-54 217.6 887 25.8
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 9.9e-54 216.5 930 25.1
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 9.9e-54 216.5 883 25.3
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 1.3e-53 216.1 904 26.9
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 1.3e-53 216.1 934 24.5
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 6.4e-53 213.8 886 26.2
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 1.1e-52 213.0 880 27.5
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.1e-52 213.0 922 25.7
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 1.4e-52 212.6 835 26.6
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 1.9e-52 212.2 879 25.5
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 2.4e-52 211.8 925 24.6
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 3.2e-52 211.5 900 26.1
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 3.2e-52 211.5 880 25.6
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 7.1e-52 210.3 880 25.1
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 9.3e-52 209.9 821 25.8
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 1.6e-51 209.1 916 24.6
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 2.7e-51 208.4 886 24.9
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 3.5e-51 208.0 960 25.5
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 4.6e-51 207.6 892 25.7
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 4.6e-51 207.6 866 23.9
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 4.6e-51 207.6 909 25.4
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 6.0e-51 207.2 847 24.9
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 7.8e-51 206.8 903 25.0
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 7.8e-51 206.8 910 24.7
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 3.0e-50 204.9 898 27.1
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 6.6e-50 203.8 895 25.0
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 8.7e-50 203.4 876 24.8
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 3.3e-49 201.4 884 25.2
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 2.1e-48 198.7 901 25.7
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 2.8e-48 198.4 895 24.8
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 3.6e-48 198.0 884 25.7
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 4.8e-48 197.6 903 24.9
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 4.8e-48 197.6 899 25.4
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.4e-47 196.1 829 25.1
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 3.1e-47 194.9 878 25.3
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 5.3e-47 194.1 897 24.9
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 9.0e-47 193.4 888 25.3
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.5e-46 192.6 934 24.7
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 2.0e-46 192.2 912 24.6
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 2.6e-46 191.8 886 23.6
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 3.4e-46 191.4 961 23.5
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 9.9e-46 189.9 905 24.9
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 1.3e-45 189.5 884 24.9
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 1.3e-45 189.5 902 24.6
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 2.9e-45 188.3 825 23.8
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 4.9e-45 187.6 893 24.7
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 8.4e-45 186.8 889 23.7
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 8.4e-45 186.8 903 24.1
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 1.2e-43 183.0 814 25.4
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 2.7e-43 181.8 954 24.8
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 4.6e-43 181.0 885 24.1
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 1.0e-42 179.9 986 22.7
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 5.3e-39 167.5 828 25.2
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 4.5e-38 164.5 867 23.0
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 1.2e-35 156.4 896 23.4
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 1.0e-34 153.3 533 27.6
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.8e-34 152.5 872 22.6
SEGI_27963 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 2.1e-32 145.6 348 31.0
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.5e-30 139.4 844 22.7
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 3.4e-30 138.3 526 25.7
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 2.5e-28 132.1 909 22.4
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 1.0e-26 126.7 649 23.0
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.9e-25 122.5 666 24.8
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 4.8e-24 117.9 644 22.8
ClCG10G002220 Citrullus lanatus HOM05D003893 ORTHO05D005167 2.0e-22 112.5 351 27.1
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 2.6e-22 112.1 463 25.9
Haze_08365 Corylus avellana HOM05D003893 ORTHO05D005167 2.4e-15 89.0 216 29.6
Nitab4.5_0009451g0070 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.2e-14 86.7 217 29.5
COL.COLO4_22133 Corchorus olitorius HOM05D003893 ORTHO05D005167 3.4e-14 85.1 224 28.6
ATR0665G055 Amborella trichopoda HOM05D003893 ORTHO05D005167 1.3e-13 83.2 287 25.8
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 1.3e-13 83.2 493 23.7
SalBow1G0831 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.6e-11 76.3 216 28.7
Haze_08366 Corylus avellana HOM05D003893 ORTHO05D005167 2.1e-11 75.9 218 30.3
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 8.2e-08 63.9 347 23.9
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 1.4e-07 63.2 203 28.6
Os10g0142900 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 1.4e-07 63.2 218 27.1


User provided reference genes

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