Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 8.2e-97 357.1 183 100.0
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 4.6e-23 112.1 123 48.8
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 3.3e-21 105.9 120 46.7
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 5.6e-21 105.1 120 46.7
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 2.1e-20 103.2 137 43.1
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 3.1e-19 99.4 141 39.0
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 4.0e-19 99.0 111 45.9
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 5.3e-19 98.6 105 47.6
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 5.3e-19 98.6 114 44.7
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 5.3e-19 98.6 106 45.3
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 6.9e-19 98.2 141 39.7
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.5e-18 97.1 133 40.6
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 3.4e-18 95.9 114 40.4
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 3.4e-18 95.9 114 43.0
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 3.4e-18 95.9 111 44.1
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 4.5e-18 95.5 114 43.9
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 5.8e-18 95.1 114 43.0
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 5.8e-18 95.1 123 41.5
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 7.6e-18 94.7 105 47.6
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 1.0e-17 94.4 105 45.7
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 1.0e-17 94.4 131 42.7
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 1.3e-17 94.0 123 43.1
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 1.3e-17 94.0 121 41.3
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.7e-17 93.6 122 42.6
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 2.2e-17 93.2 167 36.5
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.2e-17 93.2 139 41.0
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.8e-17 92.4 135 40.7
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 3.8e-17 92.4 146 37.0
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 3.8e-17 92.4 135 38.5
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 4.9e-17 92.0 133 42.1
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 4.9e-17 92.0 133 40.6
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 4.9e-17 92.0 104 46.2
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 6.5e-17 91.7 109 41.3
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 6.5e-17 91.7 134 41.8
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 8.4e-17 91.3 136 38.2
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.1e-16 90.9 105 42.9
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 3.2e-16 89.4 117 40.2
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 3.2e-16 89.4 137 35.8
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 4.2e-16 89.0 105 41.9
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 5.5e-16 88.6 134 35.8
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 7.1e-16 88.2 140 38.6
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 7.1e-16 88.2 140 38.6
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 7.1e-16 88.2 140 38.6
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 7.1e-16 88.2 140 38.6
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 7.1e-16 88.2 115 40.0
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 7.1e-16 88.2 105 44.8
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 9.3e-16 87.8 134 36.6
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 9.3e-16 87.8 137 35.0
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 9.3e-16 87.8 99 45.5
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 1.6e-15 87.0 132 39.4
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 1.6e-15 87.0 133 39.1
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 2.1e-15 86.7 122 39.3
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 2.1e-15 86.7 105 43.8
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 2.7e-15 86.3 116 40.5
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 2.7e-15 86.3 106 43.4
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 3.5e-15 85.9 105 40.0
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 3.5e-15 85.9 104 41.3
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 3.5e-15 85.9 116 37.9
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 6.0e-15 85.1 105 42.9
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 7.9e-15 84.7 134 33.6
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 7.9e-15 84.7 142 38.7
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 7.9e-15 84.7 133 39.8
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 1.0e-14 84.3 104 41.3
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.0e-14 84.3 105 47.6
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 1.0e-14 84.3 98 43.9
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.3e-14 84.0 133 37.6
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 1.8e-14 83.6 133 36.8
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 2.3e-14 83.2 106 42.5
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 3.0e-14 82.8 143 39.2
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 3.9e-14 82.4 105 41.9
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 5.1e-14 82.0 150 36.0
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.1e-13 80.9 96 43.8
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 1.1e-13 80.9 131 39.7
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.1e-13 80.9 114 39.5
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.1e-13 80.9 106 40.6
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.1e-13 80.9 106 40.6
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 1.5e-13 80.5 132 37.1
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 1.5e-13 80.5 133 38.3
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 1.9e-13 80.1 128 39.1
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.9e-13 80.1 134 38.1
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 2.5e-13 79.7 97 42.3
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 3.3e-13 79.3 105 41.0
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 3.3e-13 79.3 134 38.1
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 3.3e-13 79.3 134 38.1
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 3.3e-13 79.3 98 41.8
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 3.3e-13 79.3 98 42.9
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 4.3e-13 79.0 114 38.6
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 4.3e-13 79.0 140 36.4
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 5.7e-13 78.6 120 40.0
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 7.4e-13 78.2 100 41.0
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 9.7e-13 77.8 136 39.0
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 1.3e-12 77.4 127 37.8
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.3e-12 77.4 94 44.7
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 1.6e-12 77.0 135 34.8
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 1.6e-12 77.0 105 39.0
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 2.2e-12 76.6 104 42.3
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 2.2e-12 76.6 119 35.3
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 2.8e-12 76.3 138 35.5
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 3.7e-12 75.9 105 40.0
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.8e-12 75.5 102 40.2
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 4.8e-12 75.5 105 40.0
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 1.4e-11 73.9 131 36.6
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.4e-11 73.9 134 38.1
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.4e-11 73.9 134 35.8
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 1.8e-11 73.6 115 38.3
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 2.4e-11 73.2 135 37.8
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 3.1e-11 72.8 122 36.9
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 4.1e-11 72.4 135 34.1
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 4.1e-11 72.4 98 40.8
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 2.0e-10 70.1 133 33.1
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.7e-09 67.0 98 39.8
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 4.2e-08 62.4 89 40.4
AagrBONN_evm.TU.Sc2ySwM_344.2063 Anthoceros agrestis HOM05D006427 ORTHO05D008147 7.2e-08 61.6 51 56.9
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 9.4e-08 61.2 125 32.8
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 3.6e-07 59.3 89 38.2
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 3.9e-06 55.8 102 31.4
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 5.1e-06 55.5 104 30.8
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 8.8e-06 54.7 117 31.6


User provided reference genes

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