Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20119 Chara braunii HOM05D002376 ORTHO05D004654 0.0e+00 1842.0 1119 100.0
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 1.1e-42 179.9 185 49.2
TAR623G0587 Trochodendron aralioides HOM05D002376 ORTHO05D004654 2.1e-41 175.6 176 49.4
CANSAT54G2949 Cannabis sativa HOM05D002376 ORTHO05D004654 6.1e-41 174.1 202 44.1
TAR369G0569 Trochodendron aralioides HOM05D002376 ORTHO05D004654 1.8e-40 172.6 171 49.7
Haze_24447 Corylus avellana HOM05D002376 ORTHO05D004654 2.3e-40 172.2 190 45.8
CBR_g31178 Chara braunii HOM05D002376 ORTHO05D004654 3.0e-40 171.8 177 49.7
Gohir.A13G235800 Gossypium hirsutum HOM05D002376 ORTHO05D004654 3.0e-40 171.8 197 46.2
TPR.G24962 Trifolium pratense HOM05D002376 ORTHO05D004654 3.0e-40 171.8 177 49.7
Lsat_1_v5_gn_5_175220 Lactuca sativa HOM05D002376 ORTHO05D004654 3.9e-40 171.4 193 46.6
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.9e-40 171.4 153 52.3
GSVIVG01024586001 Vitis vinifera HOM05D002376 ORTHO05D004654 5.1e-40 171.0 185 48.6
Aqoxy2G00731 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 8.7e-40 170.2 201 46.3
CDE04G2750 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 8.7e-40 170.2 190 46.8
CSS0050025 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 1.1e-39 169.9 245 42.4
Ca_15029_v3 Cicer arietinum L. HOM05D002376 ORTHO05D004654 1.5e-39 169.5 175 49.1
Sabra13G0125800 Salix brachista HOM05D002376 ORTHO05D004654 1.5e-39 169.5 200 45.5
THA.LOC104826270 Tarenaya hassleriana HOM05D002376 ORTHO05D004654 1.9e-39 169.1 204 45.1
Gohir.1Z049629 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.5e-39 168.7 197 45.2
Gohir.D04G000035 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.5e-39 168.7 197 45.2
Gorai.012G000400 Gossypium raimondii HOM05D002376 ORTHO05D004654 2.5e-39 168.7 197 45.2
HanXRQChr01g0013301 Helianthus annuus HOM05D002376 ORTHO05D004654 3.3e-39 168.3 214 45.3
Phvul.006G076300 Phaseolus vulgaris HOM05D002376 ORTHO05D004654 3.3e-39 168.3 198 44.9
Aqoxy2G00736 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 4.3e-39 167.9 293 38.6
Sc12g0000140 Simmondsia chinensis HOM05D002376 ORTHO05D004654 4.3e-39 167.9 189 47.6
Aa31LG5G6350 Aethionema arabicum HOM05D002376 ORTHO05D004654 5.7e-39 167.5 203 45.8
CSS0048295 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 5.7e-39 167.5 245 42.9
Migut.D00832 Erythranthe guttata HOM05D002376 ORTHO05D004654 5.7e-39 167.5 167 49.1
Hma1.2p1_1637F.1_g294890 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 5.7e-39 167.5 193 44.6
Medtr3g466410 Medicago truncatula HOM05D002376 ORTHO05D004654 5.7e-39 167.5 190 46.8
Potri.019G127600 Populus trichocarpa HOM05D002376 ORTHO05D004654 5.7e-39 167.5 209 44.5
EL10Ac7g15858 Beta vulgaris HOM05D002376 ORTHO05D004654 7.4e-39 167.2 170 48.2
Ciclev10001469m.g Citrus clementina HOM05D002376 ORTHO05D004654 7.4e-39 167.2 218 42.7
COL.COLO4_11190 Corchorus olitorius HOM05D002376 ORTHO05D004654 7.4e-39 167.2 153 51.0
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 9.7e-39 166.8 175 47.4
Rhsim01G0242200 Rhododendron simsii HOM05D002376 ORTHO05D004654 9.7e-39 166.8 187 46.5
Dinv28716 Davidia involucrata HOM05D002376 ORTHO05D004654 1.3e-38 166.4 189 47.6
Lj6g0027008 Lotus japonicus HOM05D002376 ORTHO05D004654 1.3e-38 166.4 202 45.0
Eucgr.J01841 Eucalyptus grandis HOM05D002376 ORTHO05D004654 1.6e-38 166.0 200 44.0
ATR0681G169 Amborella trichopoda HOM05D002376 ORTHO05D004654 2.2e-38 165.6 156 51.9
arahy.Tifrunner.gnm1.ann1.WIJ2N1 Arachis hypogaea HOM05D002376 ORTHO05D004654 2.2e-38 165.6 208 43.8
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 2.8e-38 165.2 151 50.3
Glyma.18G054900 Glycine max HOM05D002376 ORTHO05D004654 2.8e-38 165.2 187 45.5
vmacro14632 Vaccinium macrocarpon HOM05D002376 ORTHO05D004654 2.8e-38 165.2 222 41.4
Thhalv10016841m.g Eutrema salsugineum HOM05D002376 ORTHO05D004654 3.7e-38 164.9 174 47.7
Actinidia23178 Actinidia chinensis HOM05D002376 ORTHO05D004654 4.8e-38 164.5 199 44.7
BraA04t17841Z Brassica rapa HOM05D002376 ORTHO05D004654 4.8e-38 164.5 151 51.0
Potri.013G155900 Populus trichocarpa HOM05D002376 ORTHO05D004654 4.8e-38 164.5 185 44.9
QL01p025227 Quercus lobata HOM05D002376 ORTHO05D004654 4.8e-38 164.5 172 47.7
MSTRG.12701 Avicennia marina HOM05D002376 ORTHO05D004654 6.3e-38 164.1 178 47.2
A04p23110 Brassica napus HOM05D002376 ORTHO05D004654 6.3e-38 164.1 151 51.0
CAN.G473.25 Capsicum annuum HOM05D002376 ORTHO05D004654 8.2e-38 163.7 212 41.5
AUR62009726 Chenopodium quinoa HOM05D002376 ORTHO05D004654 8.2e-38 163.7 228 42.5
C04p59280 Brassica napus HOM05D002376 ORTHO05D004654 1.1e-37 163.3 151 50.3
BolC4t27433H Brassica oleracea HOM05D002376 ORTHO05D004654 1.1e-37 163.3 151 50.3
Sopen09g014780 Solanum pennellii HOM05D002376 ORTHO05D004654 1.1e-37 163.3 157 49.7
TWI79G1034 Tripterygium wilfordii HOM05D002376 ORTHO05D004654 1.4e-37 162.9 205 44.4
Gorai.013G272400 Gossypium raimondii HOM05D002376 ORTHO05D004654 2.4e-37 162.2 197 44.7
Peaxi162Scf01078g00415 Petunia axillaris HOM05D002376 ORTHO05D004654 2.4e-37 162.2 234 41.0
Solyc09g031790.4 Solanum lycopersicum HOM05D002376 ORTHO05D004654 2.4e-37 162.2 157 49.0
PGSC0003DMG400020864 Solanum tuberosum HOM05D002376 ORTHO05D004654 2.4e-37 162.2 172 47.7
Atru.chr1.2538 Acer truncatum HOM05D002376 ORTHO05D004654 3.1e-37 161.8 178 48.9
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 4.1e-37 161.4 276 37.7
SGA_v2.0_scaffold6G03299 Striga asiatica HOM05D002376 ORTHO05D004654 4.1e-37 161.4 162 48.1
VMungo0540G1534 Vigna mungo HOM05D002376 ORTHO05D004654 4.1e-37 161.4 198 43.9
BcaC02g08025 Brassica carinata HOM05D002376 ORTHO05D004654 5.3e-37 161.0 167 47.9
Lalb_Chr20g0117351 Lupinus albus HOM05D002376 ORTHO05D004654 5.3e-37 161.0 180 47.2
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 5.3e-37 161.0 184 44.6
PGR119G0696 Punica granatum HOM05D002376 ORTHO05D004654 6.9e-37 160.6 191 42.9
Sp4g12910 Schrenkiella parvula HOM05D002376 ORTHO05D004654 6.9e-37 160.6 158 48.1
Nitab4.5_0002601g0080 Nicotiana tabacum HOM05D002376 ORTHO05D004654 9.0e-37 160.2 235 40.4
BcaB01g04112 Brassica carinata HOM05D002376 ORTHO05D004654 1.2e-36 159.8 151 49.7
MELO3C020503.2 Cucumis melo HOM05D002376 ORTHO05D004654 1.2e-36 159.8 171 46.8
BcaB06g28361 Brassica carinata HOM05D002376 ORTHO05D004654 2.0e-36 159.1 151 49.7
ECA248G1568 Erigeron canadensis HOM05D002376 ORTHO05D004654 2.0e-36 159.1 204 44.6
Lalb_Chr15g0085961 Lupinus albus HOM05D002376 ORTHO05D004654 2.0e-36 159.1 168 47.0
Nitab4.5_0000734g0130 Nicotiana tabacum HOM05D002376 ORTHO05D004654 2.6e-36 158.7 238 41.2
Thecc.09G361600 Theobroma cacao HOM05D002376 ORTHO05D004654 2.6e-36 158.7 236 39.8
CARHR123670 Cardamine hirsuta HOM05D002376 ORTHO05D004654 4.5e-36 157.9 158 46.8
ClCG03G000240 Citrullus lanatus HOM05D002376 ORTHO05D004654 4.5e-36 157.9 173 46.2
Sed0022472 Sechium edule HOM05D002376 ORTHO05D004654 1.0e-35 156.8 173 45.7
Thecc.10G043800 Theobroma cacao HOM05D002376 ORTHO05D004654 1.3e-35 156.4 201 42.3
Carub.0004s1150 Capsella rubella HOM05D002376 ORTHO05D004654 1.7e-35 156.0 207 42.0
Pp3c10_1920 Physcomitrium patens HOM05D002376 ORTHO05D004654 2.9e-35 155.2 165 49.1
FAN25G0776 Fragaria x ananassa HOM05D002376 ORTHO05D004654 3.8e-35 154.8 223 41.3
Manes.18G137600 Manihot esculenta HOM05D002376 ORTHO05D004654 3.8e-35 154.8 236 36.9
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 5.0e-35 154.5 151 49.7
Prupe.6G043600 Prunus persica HOM05D002376 ORTHO05D004654 5.0e-35 154.5 215 41.9
Hund05050 Selenicereus undatus HOM05D002376 ORTHO05D004654 5.0e-35 154.5 176 44.9
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 6.5e-35 154.1 171 44.4
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 6.5e-35 154.1 171 44.4
PSO339G0904 Papaver somniferum HOM05D002376 ORTHO05D004654 6.5e-35 154.1 196 40.8
PSO384G2467 Papaver somniferum HOM05D002376 ORTHO05D004654 6.5e-35 154.1 216 39.8
RcHm_v2.0_Chr5g0072441 Rosa chinensis HOM05D002376 ORTHO05D004654 8.5e-35 153.7 251 38.2
AL4G25210 Arabidopsis lyrata HOM05D002376 ORTHO05D004654 1.1e-34 153.3 154 47.4
AT2G30350 Arabidopsis thaliana HOM05D002376 ORTHO05D004654 1.4e-34 152.9 148 50.0
MSTRG.21249 Avicennia marina HOM05D002376 ORTHO05D004654 1.9e-34 152.5 185 44.9
MD03G1055200 Malus domestica HOM05D002376 ORTHO05D004654 1.9e-34 152.5 175 46.9
FvH4_3g40230 Fragaria vesca HOM05D002376 ORTHO05D004654 2.5e-34 152.1 203 43.8
FAN11G3581 Fragaria x ananassa HOM05D002376 ORTHO05D004654 2.5e-34 152.1 203 43.8
FAN16G2868 Fragaria x ananassa HOM05D002376 ORTHO05D004654 2.5e-34 152.1 203 43.8
MD11G1056400 Malus domestica HOM05D002376 ORTHO05D004654 2.5e-34 152.1 198 44.4
Cc01_g15150 Coffea canephora HOM05D002376 ORTHO05D004654 3.2e-34 151.8 170 45.9
FAN21G3096 Fragaria x ananassa HOM05D002376 ORTHO05D004654 4.2e-34 151.4 222 41.0
BcaC01g05989 Brassica carinata HOM05D002376 ORTHO05D004654 5.5e-34 151.0 171 45.0
Zm00001eb303730 Zea mays HOM05D002376 ORTHO05D004654 1.2e-33 149.8 203 42.9
Mapoly0004s0007 Marchantia polymorpha HOM05D002376 ORTHO05D004654 1.6e-33 149.4 164 48.8
Prupe.6G045800 Prunus persica HOM05D002376 ORTHO05D004654 3.6e-33 148.3 200 42.0
Prupe.1G106000 Prunus persica HOM05D002376 ORTHO05D004654 1.1e-31 143.3 201 41.3
SMO364G0016 Selaginella moellendorffii HOM05D002376 ORTHO05D004654 1.3e-30 139.8 187 43.9
arahy.Tifrunner.gnm1.ann1.D8LDTS Arachis hypogaea HOM05D002376 ORTHO05D004654 2.2e-30 139.0 287 33.1
Hma1.2p1_2270F.1_g318510 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 2.8e-30 138.7 152 45.4
Psat5g150440 Pisum sativum HOM05D002376 ORTHO05D004654 4.8e-30 137.9 129 51.2
CsaV3_1G036670 Cucumis sativus L. HOM05D002376 ORTHO05D004654 1.4e-29 136.3 163 42.9
Os07g0230500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D004654 1.4e-29 136.3 155 44.5
SHI19259 Sapria himalayana HOM05D002376 ORTHO05D004654 1.4e-29 136.3 240 36.7
Cre07.g351500 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D004654 2.4e-29 135.6 197 40.6
AUR62036221 Chenopodium quinoa HOM05D002376 ORTHO05D004654 3.4e-28 131.7 132 50.8
Actinidia11613 Actinidia chinensis HOM05D000055 ORTHO05D000057 4.5e-28 131.3 270 33.7
Gohir.1Z049465 Gossypium hirsutum HOM05D002376 ORTHO05D004654 4.5e-28 131.3 198 38.4
MCO16G118 Micromonas commoda HOM05D002376 ORTHO05D004654 4.5e-28 131.3 152 46.1
Nn5g26899 Nelumbo nucifera HOM05D002376 ORTHO05D004654 3.8e-27 128.3 119 51.3
PRCOL_00000864 Prasinoderma coloniale HOM05D002376 ORTHO05D004654 7.2e-26 124.0 164 41.5
Oeu011367.1 Olea europaea HOM05D002376 ORTHO05D004654 1.6e-25 122.9 112 51.8
C04p59230 Brassica napus HOM05D002376 ORTHO05D004654 7.9e-25 120.6 177 39.0
Cfa011807 Carpinus fangiana HOM05D002376 ORTHO05D004654 7.9e-25 120.6 139 44.6
Gohir.A08G000016 Gossypium hirsutum HOM05D002376 ORTHO05D004654 3.0e-24 118.6 163 39.3
Gohir.1Z049334 Gossypium hirsutum HOM05D002376 ORTHO05D004654 8.8e-24 117.1 198 36.9
A03p02950 Brassica napus HOM05D002376 ORTHO05D004654 3.3e-23 115.2 100 53.0
Glyma.11G161200 Glycine max HOM05D002376 ORTHO05D004654 1.1e-21 110.2 137 43.1
Gorai.005G269000 Gossypium raimondii HOM05D002376 ORTHO05D004654 1.3e-19 103.2 112 47.3
Prupe.1G108400 Prunus persica HOM05D002376 ORTHO05D004654 1.9e-18 99.4 182 36.3
SEGI_39190 Sequoiadendron giganteum HOM05D002376 ORTHO05D004654 3.2e-18 98.6 123 43.9
Nn5g26910 Nelumbo nucifera HOM05D002376 ORTHO05D004654 1.6e-17 96.3 84 54.8
Gohir.A05G415701 Gossypium hirsutum HOM05D002376 ORTHO05D004654 4.7e-17 94.7 104 45.2
BcaC02g08029 Brassica carinata HOM05D002376 ORTHO05D004654 1.4e-16 93.2 116 44.0
SEGI_33829 Sequoiadendron giganteum HOM05D002376 ORTHO05D004654 1.4e-16 93.2 84 47.6
Gohir.A06G201400 Gossypium hirsutum HOM05D002376 ORTHO05D004654 5.2e-16 91.3 112 43.8
Gohir.A08G000028 Gossypium hirsutum HOM05D002376 ORTHO05D004654 5.2e-16 91.3 112 43.8
Gohir.D13G241450 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.0e-15 89.4 95 46.3
BolC9t57873H Brassica oleracea HOM05D002376 ORTHO05D004654 3.3e-15 88.6 111 43.2
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 4.4e-15 88.2 111 44.1
CiPaw.14G052200 Carya illinoinensis HOM05D002376 ORTHO05D004654 2.2e-11 75.9 88 44.3
Gorai.010G000700 Gossypium raimondii HOM05D002376 ORTHO05D004654 2.5e-10 72.4 94 43.6
Prupe.1G103400 Prunus persica HOM05D002376 ORTHO05D004654 1.2e-09 70.1 74 47.3
CiPaw.14G052300 Carya illinoinensis HOM05D002376 ORTHO05D004654 8.8e-08 63.9 77 41.6
Cfa023829 Carpinus fangiana HOM05D002376 ORTHO05D004654 1.2e-07 63.5 141 31.2
Gohir.D13G241500 Gossypium hirsutum HOM05D002376 ORTHO05D004654 3.4e-07 62.0 74 45.9
arahy.Tifrunner.gnm1.ann1.P4WV5Z Arachis hypogaea HOM05D000138 ORTHO05D000078 3.7e-06 58.5 48 54.2
C07p50650 Brassica napus HOM05D002376 ORTHO05D004654 8.3e-06 57.4 66 45.5
BolC7t45569H Brassica oleracea HOM05D002376 ORTHO05D004654 8.3e-06 57.4 66 45.5


User provided reference genes

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