Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 0.0e+00 1368.2 777 100.0
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 6.1e-117 426.0 769 35.9
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 4.4e-115 419.9 767 34.6
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 7.5e-115 419.1 776 35.8
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.2e-114 417.5 762 34.9
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 2.2e-114 417.5 770 33.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.9e-114 417.2 762 34.9
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 4.9e-114 416.4 773 34.5
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.0e-113 412.5 765 34.2
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.2e-112 411.8 764 34.3
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 5.9e-112 409.5 760 34.9
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.3e-111 408.3 764 34.3
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.3e-111 408.3 764 34.0
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.7e-111 407.9 761 33.8
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 2.3e-111 407.5 765 34.4
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 3.0e-111 407.1 764 34.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 5.0e-111 406.4 762 34.8
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 5.0e-111 406.4 772 35.0
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 6.6e-111 406.0 774 34.5
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 8.6e-111 405.6 762 34.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 8.6e-111 405.6 769 33.9
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 8.6e-111 405.6 761 33.6
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 8.6e-111 405.6 772 35.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.1e-110 405.2 765 33.5
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.1e-110 405.2 765 34.2
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.5e-110 404.8 759 34.1
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.9e-110 404.4 769 34.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.9e-110 404.4 766 34.6
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 2.5e-110 404.1 760 33.7
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.5e-110 404.1 772 34.8
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.3e-110 403.7 761 33.5
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 5.6e-110 402.9 765 33.5
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 5.6e-110 402.9 769 33.6
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.6e-109 401.4 772 34.5
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.8e-109 400.6 771 33.6
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 4.7e-109 399.8 763 37.0
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.7e-109 399.8 773 34.3
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 6.2e-109 399.4 763 33.6
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.0e-108 398.7 766 33.4
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 3.1e-108 397.1 763 33.2
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 6.8e-108 396.0 769 33.4
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 6.8e-108 396.0 773 33.9
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 8.9e-108 395.6 770 32.9
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 8.9e-108 395.6 771 32.4
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 8.9e-108 395.6 782 33.6
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 1.2e-107 395.2 763 34.5
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.5e-107 394.8 764 33.8
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.5e-107 394.8 764 33.4
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.5e-107 394.8 778 33.3
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.5e-107 394.8 763 33.3
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 2.0e-107 394.4 764 33.2
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 3.4e-107 393.7 807 33.2
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 3.4e-107 393.7 770 33.6
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 4.4e-107 393.3 764 33.5
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.4e-107 393.3 786 33.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 7.5e-107 392.5 764 33.1
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 7.5e-107 392.5 778 33.2
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.8e-107 392.1 775 33.3
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.3e-106 391.7 766 33.0
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.7e-106 391.3 769 34.2
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.7e-106 391.3 769 34.2
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 6.4e-106 389.4 767 33.1
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.4e-105 388.3 762 32.8
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 3.2e-105 387.1 769 32.5
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 4.1e-105 386.7 749 33.8
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 5.4e-105 386.3 769 33.9
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 9.2e-105 385.6 760 33.2
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.2e-104 385.2 772 32.8
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.6e-104 384.8 769 32.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 6.0e-104 382.9 756 33.6
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.0e-103 382.1 769 33.6
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.7e-103 381.3 791 32.4
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.3e-103 380.9 777 32.2
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 3.9e-103 380.2 734 33.8
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 3.9e-103 380.2 766 32.2
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 9.5e-102 375.6 733 36.2
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.8e-101 374.0 738 34.4
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 6.2e-101 372.9 731 33.4
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 8.1e-101 372.5 744 33.1
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 2.3e-100 370.9 754 32.5
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.3e-100 370.9 730 33.4
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 3.1e-100 370.5 767 32.3
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 4.0e-100 370.2 777 32.4
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 5.8e-99 366.3 768 32.4
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 2.2e-98 364.4 690 34.3
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.2e-98 364.4 769 34.6
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.4e-98 362.8 635 36.2
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 8.3e-98 362.5 757 32.2
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 2.1e-96 357.8 811 31.8
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.7e-96 357.5 644 34.0
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 8.6e-95 352.4 639 34.4
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 4.3e-94 350.1 769 31.1
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 7.6e-91 339.3 718 33.1
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.2e-90 337.8 606 35.5
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 3.9e-87 327.0 770 30.5
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.2e-85 322.0 778 29.2
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.4e-81 308.5 552 38.2
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 5.4e-81 306.6 425 38.6
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 1.5e-78 298.5 423 39.2
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.1e-68 265.8 290 45.5
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.3e-63 248.8 395 36.7
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 4.3e-62 243.8 468 33.8
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.4e-49 202.2 401 31.9
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 2.6e-38 164.9 433 30.7
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 2.6e-30 138.3 217 38.2
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 6.3e-29 133.7 360 30.0
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 2.4e-20 105.1 220 30.0
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 7.7e-19 100.1 215 29.8
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.7e-13 82.4 179 29.6
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 4.8e-13 80.9 64 54.7
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 4.1e-12 77.8 68 50.0
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 7.0e-12 77.0 76 43.4
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 4.2e-09 67.8 61 45.9


User provided reference genes

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