Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 0.0e+00 8687.4 5291 100.0
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 1.0e-66 261.9 547 38.4
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 1.7e-61 244.6 490 38.4
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 5.0e-61 243.0 347 47.0
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 2.5e-60 240.7 491 38.7
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 2.5e-60 240.7 491 38.7
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 7.2e-60 239.2 537 38.4
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 2.6e-57 230.7 498 37.6
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 2.6e-57 230.7 498 37.6
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 8.3e-56 225.7 495 36.8
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 8.3e-56 225.7 495 36.8
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 5.4e-55 223.0 512 35.2
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 1.0e-53 218.8 525 38.3
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 2.3e-53 217.6 511 36.6
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 3.9e-53 216.9 507 39.8
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 6.6e-53 216.1 491 38.5
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 8.6e-53 215.7 411 40.6
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 1.1e-52 215.3 337 45.4
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 1.9e-52 214.5 496 37.3
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 1.9e-52 214.5 531 36.3
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 2.5e-52 214.2 501 37.1
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 3.3e-52 213.8 337 45.1
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 4.3e-52 213.4 524 35.7
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 5.6e-52 213.0 507 36.1
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 5.6e-52 213.0 579 30.6
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 7.3e-52 212.6 567 30.9
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 9.5e-52 212.2 508 36.8
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 9.5e-52 212.2 491 40.3
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 1.6e-51 211.5 506 37.0
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 1.6e-51 211.5 508 34.3
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 2.1e-51 211.1 504 38.3
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 2.1e-51 211.1 505 36.8
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 2.8e-51 210.7 540 38.0
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 2.8e-51 210.7 510 37.5
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 2.8e-51 210.7 471 36.1
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 3.6e-51 210.3 528 37.7
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 1.8e-50 208.0 505 35.4
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 2.3e-50 207.6 524 32.8
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 5.2e-50 206.5 515 35.5
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 6.8e-50 206.1 514 35.0
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 1.2e-49 205.3 386 39.1
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 1.2e-49 205.3 528 35.4
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 1.2e-49 205.3 512 35.5
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 3.4e-49 203.8 490 37.8
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 4.4e-49 203.4 504 34.3
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 4.4e-49 203.4 530 36.2
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 4.4e-49 203.4 506 38.5
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 4.4e-49 203.4 515 35.0
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 5.8e-49 203.0 519 33.9
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 5.8e-49 203.0 488 38.1
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 5.8e-49 203.0 544 34.4
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 7.5e-49 202.6 449 38.1
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 9.8e-49 202.2 504 34.3
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 1.3e-48 201.8 490 36.9
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 1.3e-48 201.8 501 34.7
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 1.3e-48 201.8 524 34.7
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.7e-48 201.4 529 36.7
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 2.2e-48 201.1 505 35.6
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 2.2e-48 201.1 544 33.8
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 4.9e-48 199.9 484 35.5
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 6.4e-48 199.5 401 39.7
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 6.4e-48 199.5 531 33.1
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 8.3e-48 199.1 506 34.8
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.1e-47 198.7 512 35.5
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.9e-47 198.0 434 39.6
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 3.2e-47 197.2 484 35.5
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 5.4e-47 196.4 388 38.7
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 5.4e-47 196.4 529 34.2
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 5.4e-47 196.4 372 43.8
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 7.0e-47 196.1 490 38.2
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 7.0e-47 196.1 511 37.4
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 9.2e-47 195.7 522 37.9
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 9.2e-47 195.7 383 39.4
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.6e-46 194.9 491 36.5
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 2.0e-46 194.5 503 35.0
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 2.0e-46 194.5 494 34.6
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 3.5e-46 193.7 555 33.9
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 4.6e-46 193.4 374 37.2
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 6.0e-46 193.0 516 34.9
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 1.3e-45 191.8 251 46.6
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 1.7e-45 191.4 502 35.1
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 1.7e-45 191.4 351 44.4
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 2.3e-45 191.0 547 36.0
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.0e-45 190.7 505 33.7
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 2.5e-44 187.6 494 36.4
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 2.5e-44 187.6 368 39.1
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 9.5e-44 185.7 541 34.8
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 1.6e-43 184.9 497 36.6
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 1.6e-43 184.9 505 33.3
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 2.1e-43 184.5 390 36.2
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 2.1e-43 184.5 389 37.3
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 8.9e-42 179.1 526 36.5
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 9.8e-41 175.6 285 38.2
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 2.9e-40 174.1 393 33.6
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 8.3e-40 172.6 420 33.3
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.4e-39 171.8 231 42.4
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 1.6e-38 168.3 495 31.7
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 3.5e-38 167.2 324 36.4
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 4.6e-38 166.8 582 31.6
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 1.0e-37 165.6 505 30.7
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 5.1e-37 163.3 536 31.7
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 8.9e-34 152.5 643 29.2
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 1.2e-33 152.1 383 33.7
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 2.6e-33 151.0 383 33.4
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 2.9e-32 147.5 489 31.3
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 6.4e-32 146.4 498 33.7
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 1.9e-31 144.8 308 35.7
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 1.2e-30 142.1 489 30.7
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.2e-30 142.1 397 28.7
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 8.6e-29 136.0 489 30.5
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 1.1e-28 135.6 234 43.2
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 1.5e-28 135.2 288 34.4
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 3.3e-28 134.0 182 45.6
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 4.9e-24 120.2 200 42.0
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 2.4e-18 101.3 80 56.2
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 7.8e-14 86.3 70 58.6
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 1.0e-13 85.9 70 58.6
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 8.7e-13 82.8 134 54.5
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 9.6e-12 79.3 75 46.7
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 8.1e-11 76.3 150 32.7


User provided reference genes

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