Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g17052 Chara braunii HOM05D003758 ORTHO05D004344 0.0e+00 2561.2 1456 100.0
CBR_g41368 Chara braunii HOM05D003758 ORTHO05D004344 1.0e-85 323.2 617 34.2
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 3.4e-36 158.7 680 25.7
Mapoly0039s0104 Marchantia polymorpha HOM05D003758 ORTHO05D004344 1.2e-28 133.7 531 24.5
Nn6g32438 Nelumbo nucifera HOM05D003758 ORTHO05D004344 3.0e-24 119.0 325 28.0
Potri.002G194100 Populus trichocarpa HOM05D003758 ORTHO05D004344 1.5e-23 116.7 295 28.1
vmacro07358 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 2.5e-23 115.9 541 26.4
vmacro23005 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 4.3e-23 115.2 532 26.7
HanXRQChr01g0018011 Helianthus annuus HOM05D003758 ORTHO05D004344 5.7e-23 114.8 301 27.6
AagrBONN_evm.TU.Sc2ySwM_344.4368 Anthoceros agrestis HOM05D003758 ORTHO05D004344 7.4e-23 114.4 313 28.4
Prupe.3G010600 Prunus persica HOM05D003758 ORTHO05D004344 9.7e-23 114.0 316 28.8
ECA248G1618 Erigeron canadensis HOM05D003758 ORTHO05D004344 1.7e-22 113.2 294 27.9
CSS0004415 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 2.2e-22 112.8 315 27.6
CSS0000786 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 2.8e-22 112.5 315 27.6
AT2G47300 Arabidopsis thaliana HOM05D003758 ORTHO05D004344 8.2e-22 110.9 295 28.8
GSVIVG01020570001 Vitis vinifera HOM05D003758 ORTHO05D004344 1.4e-21 110.2 318 25.5
Psat7g259120 Pisum sativum HOM05D003758 ORTHO05D004344 1.8e-21 109.8 326 26.1
CDE11G0119 Ceratophyllum demersum HOM05D003758 ORTHO05D004344 2.4e-21 109.4 311 28.9
PSO384G2631 Papaver somniferum HOM05D003758 ORTHO05D004344 5.3e-21 108.2 528 22.9
QL03p022487 Quercus lobata HOM05D003758 ORTHO05D004344 5.3e-21 108.2 242 27.7
MD17G1277400 Malus domestica HOM05D003758 ORTHO05D004344 6.9e-21 107.8 314 28.0
RcHm_v2.0_Chr3g0487391 Rosa chinensis HOM05D003758 ORTHO05D004344 9.1e-21 107.5 308 27.9
Eucgr.F03545 Eucalyptus grandis HOM05D003758 ORTHO05D004344 1.2e-20 107.1 419 25.5
Manes.05G014400 Manihot esculenta HOM05D003758 ORTHO05D004344 1.2e-20 107.1 258 28.3
CiPaw.05G057800 Carya illinoinensis HOM05D003758 ORTHO05D004344 2.0e-20 106.3 262 27.5
MBI19_g03239_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 2.0e-20 106.3 573 22.2
vmacro02393 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 2.6e-20 105.9 318 27.7
MD17G1275700 Malus domestica HOM05D003758 ORTHO05D004344 3.4e-20 105.5 311 28.0
Manes.05G007428 Manihot esculenta HOM05D003758 ORTHO05D004344 3.4e-20 105.5 258 27.9
Aa31LG1G28620 Aethionema arabicum HOM05D003758 ORTHO05D004344 4.5e-20 105.1 347 26.2
Manes.08G002202 Manihot esculenta HOM05D003758 ORTHO05D004344 4.5e-20 105.1 258 27.9
Ca_26914_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 5.9e-20 104.8 307 25.7
Ca_29676_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 5.9e-20 104.8 307 25.7
Haze_15238 Corylus avellana HOM05D003758 ORTHO05D004344 5.9e-20 104.8 307 27.4
Duzib211G0665 Durio zibethinus HOM05D003758 ORTHO05D004344 5.9e-20 104.8 242 29.3
ATR0693G226 Amborella trichopoda HOM05D003758 ORTHO05D004344 7.7e-20 104.4 296 28.4
Migut.N00382 Erythranthe guttata HOM05D003758 ORTHO05D004344 7.7e-20 104.4 308 26.0
Manes.05G012284 Manihot esculenta HOM05D003758 ORTHO05D004344 7.7e-20 104.4 257 28.0
Manes.05G014105 Manihot esculenta HOM05D003758 ORTHO05D004344 7.7e-20 104.4 257 28.0
Carub.0004s3002 Capsella rubella HOM05D003758 ORTHO05D004344 1.0e-19 104.0 241 30.7
CANSAT35G0058 Cannabis sativa HOM05D003758 ORTHO05D004344 1.3e-19 103.6 315 26.7
Psat4g209760 Pisum sativum HOM05D003758 ORTHO05D004344 1.7e-19 103.2 311 27.0
CiPaw.13G125700 Carya illinoinensis HOM05D003758 ORTHO05D004344 2.2e-19 102.8 306 26.5
Manes.17G075900 Manihot esculenta HOM05D003758 ORTHO05D004344 2.2e-19 102.8 258 27.5
BcaB02g08631 Brassica carinata HOM05D003758 ORTHO05D004344 2.9e-19 102.4 237 30.0
TAR633G1738 Trochodendron aralioides HOM05D003758 ORTHO05D004344 2.9e-19 102.4 320 26.9
FvH4_1g27070 Fragaria vesca HOM05D003758 ORTHO05D004344 3.8e-19 102.1 311 25.1
FAN28G1741 Fragaria x ananassa HOM05D003758 ORTHO05D004344 3.8e-19 102.1 372 24.2
Gohir.A11G108400 Gossypium hirsutum HOM05D003758 ORTHO05D004344 3.8e-19 102.1 242 28.1
PGR044G1293 Punica granatum HOM05D003758 ORTHO05D004344 3.8e-19 102.1 242 26.9
PGR132G0005 Punica granatum HOM05D003758 ORTHO05D004344 3.8e-19 102.1 242 26.9
Atru.chr5.975 Acer truncatum HOM05D003758 ORTHO05D004344 5.0e-19 101.7 296 28.0
Gohir.D11G112900 Gossypium hirsutum HOM05D003758 ORTHO05D004344 5.0e-19 101.7 242 28.1
Lsat_1_v5_gn_1_61501 Lactuca sativa HOM05D003758 ORTHO05D004344 5.0e-19 101.7 240 28.8
SalBow3G2832 Salvia bowleyana HOM05D003758 ORTHO05D004344 5.0e-19 101.7 418 25.6
CARHR142690 Cardamine hirsuta HOM05D003758 ORTHO05D004344 6.5e-19 101.3 242 29.3
Cfa004172 Carpinus fangiana HOM05D003758 ORTHO05D004344 8.5e-19 100.9 250 27.2
Lalb_Chr02g0146891 Lupinus albus HOM05D003758 ORTHO05D004344 1.1e-18 100.5 303 26.7
Aqoxy6G02867 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 1.4e-18 100.1 296 28.0
Lj4g0003540 Lotus japonicus HOM05D003758 ORTHO05D004344 1.4e-18 100.1 318 24.5
PGSC0003DMG400027361 Solanum tuberosum HOM05D003758 ORTHO05D004344 1.4e-18 100.1 255 27.5
Sopen11g003660 Solanum pennellii HOM05D003758 ORTHO05D004344 1.9e-18 99.8 255 27.8
Glyma.16G071100 Glycine max HOM05D003758 ORTHO05D004344 2.5e-18 99.4 334 24.0
Gorai.007G121400 Gossypium raimondii HOM05D003758 ORTHO05D004344 2.5e-18 99.4 242 27.7
Nitab4.5_0004412g0060 Nicotiana tabacum HOM05D003758 ORTHO05D004344 2.5e-18 99.4 311 25.4
PSO339G3435 Papaver somniferum HOM05D003758 ORTHO05D004344 2.5e-18 99.4 307 26.7
FAN23G2430 Fragaria x ananassa HOM05D003758 ORTHO05D004344 3.2e-18 99.0 373 26.0
Sp7g11950 Schrenkiella parvula HOM05D003758 ORTHO05D004344 3.2e-18 99.0 335 25.7
Solyc11g007800.3 Solanum lycopersicum HOM05D003758 ORTHO05D004344 3.2e-18 99.0 255 27.5
Thecc.01G315600 Theobroma cacao HOM05D003758 ORTHO05D004344 3.2e-18 99.0 316 26.6
Lj2A672T52 Lonicera japonica HOM05D003758 ORTHO05D004344 4.2e-18 98.6 233 27.9
Nitab4.5_0000321g0240 Nicotiana tabacum HOM05D003758 ORTHO05D004344 4.2e-18 98.6 353 23.5
Pp3c2_6540 Physcomitrium patens HOM05D003758 ORTHO05D004344 4.2e-18 98.6 244 29.5
FAN26G0338 Fragaria x ananassa HOM05D003758 ORTHO05D004344 5.5e-18 98.2 373 25.2
Nitab4.5_0004743g0050 Nicotiana tabacum HOM05D003758 ORTHO05D004344 5.5e-18 98.2 326 24.8
Cpa.g.sc18.69 Carica papaya HOM05D003758 ORTHO05D004344 7.2e-18 97.8 307 26.1
AUR62024624 Chenopodium quinoa HOM05D003758 ORTHO05D004344 7.2e-18 97.8 298 23.8
Thhalv10024413m.g Eutrema salsugineum HOM05D003758 ORTHO05D004344 7.2e-18 97.8 242 28.5
Dinv37509 Davidia involucrata HOM05D003758 ORTHO05D004344 9.4e-18 97.4 304 27.3
FAN19G1056 Fragaria x ananassa HOM05D003758 ORTHO05D004344 1.6e-17 96.7 320 25.0
BraA04t16490Z Brassica rapa HOM05D003758 ORTHO05D004344 2.1e-17 96.3 299 27.4
Lj3g0021338 Lotus japonicus HOM05D003758 ORTHO05D004344 6.1e-17 94.7 319 25.4
Hund21053 Selenicereus undatus HOM05D003758 ORTHO05D004344 6.1e-17 94.7 247 27.9
Ciclev10023744m.g Citrus clementina HOM05D003758 ORTHO05D004344 1.0e-16 94.0 306 26.5
Glyma.15G216400 Glycine max HOM05D003758 ORTHO05D004344 1.4e-16 93.6 326 23.6
AL4G46860 Arabidopsis lyrata HOM05D003758 ORTHO05D004344 2.3e-16 92.8 429 25.9
BcaC02g09356 Brassica carinata HOM05D003758 ORTHO05D004344 3.0e-16 92.4 239 27.6
TWI36G1552 Tripterygium wilfordii HOM05D003758 ORTHO05D004344 3.0e-16 92.4 257 26.5
AL302U10030 Arabidopsis lyrata HOM05D003758 ORTHO05D004344 3.9e-16 92.0 372 25.8
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea HOM05D003758 ORTHO05D004344 5.1e-16 91.7 357 23.8
A04p08020 Brassica napus HOM05D003758 ORTHO05D004344 5.1e-16 91.7 297 26.9
Phvul.011G184700 Phaseolus vulgaris HOM05D003758 ORTHO05D004344 5.1e-16 91.7 322 24.2
VMungo1127G2096 Vigna mungo HOM05D003758 ORTHO05D004344 6.7e-16 91.3 334 24.6
CiPaw.05G057600 Carya illinoinensis HOM05D003758 ORTHO05D004344 8.8e-16 90.9 241 25.7
Medtr4g008840 Medicago truncatula HOM05D003758 ORTHO05D004344 8.8e-16 90.9 316 25.0
THA.LOC104807090 Tarenaya hassleriana HOM05D003758 ORTHO05D004344 8.8e-16 90.9 236 28.8
COL.COLO4_23214 Corchorus olitorius HOM05D003758 ORTHO05D004344 1.5e-15 90.1 241 28.2
Eucgr.D02543 Eucalyptus grandis HOM05D003758 ORTHO05D004344 1.5e-15 90.1 300 24.3
Manes.05G010463 Manihot esculenta HOM05D003758 ORTHO05D004344 1.5e-15 90.1 228 27.2
DCAR_018285 Daucus carota HOM05D003758 ORTHO05D004344 2.6e-15 89.4 310 24.5
CAN.G135.34 Capsicum annuum HOM05D003758 ORTHO05D004344 4.4e-15 88.6 255 27.5
SGA_v2.0_scaffold114G31985 Striga asiatica HOM05D003758 ORTHO05D004344 9.7e-15 87.4 325 23.7
AUR62011780 Chenopodium quinoa HOM05D003758 ORTHO05D004344 1.3e-14 87.0 284 24.3
Peaxi162Scf00192g01619 Petunia axillaris HOM05D003758 ORTHO05D004344 2.2e-14 86.3 252 24.6
C04p41700 Brassica napus HOM05D003758 ORTHO05D004344 8.2e-14 84.3 247 27.5
BolC4t25747H Brassica oleracea HOM05D003758 ORTHO05D004344 8.2e-14 84.3 247 27.5
Rhsim13G0004000 Rhododendron simsii HOM05D003758 ORTHO05D004344 5.3e-13 81.6 317 26.5
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea HOM05D003758 ORTHO05D004344 4.5e-12 78.6 365 22.7
unitig_8.g3963 Utricularia gibba HOM05D003758 ORTHO05D004344 2.9e-11 75.9 252 23.4
Ah.02g112390 Amaranthus hybridus HOM05D003758 ORTHO05D004344 1.1e-10 73.9 344 23.0
TPR.G844 Trifolium pratense HOM05D003758 ORTHO05D004344 7.2e-10 71.2 193 28.0
Actinidia03664 Actinidia chinensis HOM05D003758 ORTHO05D004344 8.0e-09 67.8 161 29.2
Os11g0677500 Oryza sativa ssp. japonica HOM05D003758 ORTHO05D004344 8.0e-09 67.8 153 30.1
Atru.chr9.1365 Acer truncatum HOM05D003758 ORTHO05D004344 1.4e-08 67.0 283 23.7
MSTRG.19341 Avicennia marina HOM05D003758 ORTHO05D004344 7.4e-07 61.2 194 26.8
TAR629G2570 Trochodendron aralioides HOM05D003758 ORTHO05D004344 2.8e-06 59.3 141 27.0
Dinv10116 Davidia involucrata HOM05D003758 ORTHO05D004344 6.3e-06 58.2 126 31.0
Cre04.g214690 Chlamydomonas reinhardtii HOM05D003758 ORTHO05D004344 8.2e-06 57.8 162 25.3


User provided reference genes

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