Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR263960 Cardamine hirsuta HOM05D008905 ORTHO05D000002 1.5e-181 639.4 321 100.0
SpUn0001_0220 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.6e-47 193.0 249 41.4
Sp3g28830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.2e-45 188.0 288 39.6
Sp2g06690 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.4e-43 179.1 173 48.0
Sp5g17370 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.2e-42 177.9 318 35.8
CARHR053150 Cardamine hirsuta HOM05D008905 ORTHO05D000002 3.9e-41 172.9 157 55.4
Sp4g05780 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.5e-40 170.2 340 32.6
Sp3g28500 Schrenkiella parvula HOM05D000004 ORTHO05D000002 7.3e-40 168.7 258 36.8
BcaB04g17630 Brassica carinata HOM05D008905 ORTHO05D000002 1.5e-37 161.0 204 39.2
AT1G67020 Arabidopsis thaliana HOM05D010730 ORTHO05D000002 1.1e-35 154.8 168 47.6
Sp7g10840 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-35 154.8 252 37.7
Sp5g17430 Schrenkiella parvula HOM05D000004 ORTHO05D000002 9.2e-35 151.8 263 36.9
Sp6g13440 Schrenkiella parvula HOM05D008905 ORTHO05D000002 6.0e-34 149.1 259 34.7
Sp1g32560 Schrenkiella parvula HOM05D008905 ORTHO05D000002 6.6e-33 145.6 209 36.8
BcaC02g11045 Brassica carinata HOM05D014061 ORTHO05D000002 3.3e-32 143.3 157 43.9
AL7G36470 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 7.3e-32 142.1 249 35.7
Sp3g22620 Schrenkiella parvula HOM05D008905 ORTHO05D000002 8.1e-31 138.7 251 34.3
SpUn0027_0100 Schrenkiella parvula HOM05D008905 ORTHO05D000002 8.1e-31 138.7 251 34.3
BcaC03g16345 Brassica carinata HOM05D008905 ORTHO05D000002 5.8e-29 132.5 161 41.0
BcaC02g07698 Brassica carinata HOM05D008905 ORTHO05D000002 7.6e-29 132.1 170 38.8
BcaNung00402 Brassica carinata HOM05D008905 ORTHO05D000002 2.2e-28 130.6 318 28.6
Sp6g16040 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.2e-27 126.3 195 36.9
BcaB05g23469 Brassica carinata HOM05D008905 ORTHO05D000002 5.4e-27 125.9 240 32.1
Sp6g10530 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.4e-22 111.3 174 35.1
BcaC04g21337 Brassica carinata HOM05D014061 ORTHO05D000002 4.0e-22 109.8 184 34.8
THA.LOC104815241 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.4e-21 106.3 296 28.0
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-20 104.4 268 28.4
SpUn0008_0090 Schrenkiella parvula HOM05D000004 ORTHO05D027095 1.7e-20 104.4 233 30.5
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 5.4e-19 99.4 197 30.5
Thhalv10003066m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 7.1e-19 99.0 254 29.1
AL6G32420 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 1.2e-18 98.2 158 32.3
Psat5g099160 Pisum sativum HOM05D000004 ORTHO05D000002 1.2e-18 98.2 234 26.9
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-18 97.8 231 26.4
THA.LOC104798668 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 2.1e-18 97.4 169 26.0
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 7.8e-18 95.5 319 26.3
ECA238G3110 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.9e-17 93.2 233 27.9
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 5.1e-17 92.8 261 26.1
Sp6g11810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.6e-17 92.4 142 31.0
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 1.9e-16 90.9 288 25.3
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 2.5e-16 90.5 230 26.5
Sp1g31410 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.3e-16 89.7 123 37.4
Sp6g23650 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.3e-16 89.7 212 30.7
Psat0s3433g0040 Pisum sativum HOM05D000004 ORTHO05D000002 5.6e-16 89.4 261 26.4
BcaB01g00892 Brassica carinata HOM05D014061 ORTHO05D000002 7.3e-16 89.0 90 45.6
A03p10320 Brassica napus HOM05D008905 ORTHO05D000002 7.3e-16 89.0 172 32.6
ECA233G5755 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.3e-16 89.0 153 31.4
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-15 88.2 261 24.5
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 1.6e-15 87.8 218 27.5
COL.COLO4_22673 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.1e-15 87.4 225 25.8
Psat4g134960 Pisum sativum HOM05D000004 ORTHO05D000002 2.8e-15 87.0 245 26.5
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-15 86.3 257 24.9
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.2e-15 85.9 260 23.8
BcaC08g46669 Brassica carinata HOM05D008905 ORTHO05D000002 8.1e-15 85.5 222 28.8
ECA238G4415 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.1e-15 85.5 231 28.1
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 1.1e-14 85.1 259 23.6
Sp7g06650 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.1e-14 85.1 146 36.3
Carub.0004s0689 Capsella rubella HOM05D008905 ORTHO05D000002 2.4e-14 84.0 157 31.8
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-14 83.2 254 25.6
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 6.9e-14 82.4 139 29.5
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 6.9e-14 82.4 261 23.4
RcHm_v2.0_Chr2g0174581 Rosa chinensis HOM05D000004 ORTHO05D000002 6.9e-14 82.4 243 26.3
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 9.0e-14 82.0 235 26.0
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 9.0e-14 82.0 235 26.0
C03p11850 Brassica napus HOM05D008905 ORTHO05D000002 1.2e-13 81.6 162 30.9
BolC3t13655H Brassica oleracea HOM05D008905 ORTHO05D000002 1.2e-13 81.6 162 30.9
C03p35060 Brassica napus HOM05D008905 ORTHO05D000002 1.5e-13 81.3 94 41.5
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-13 81.3 261 23.0
HanXRQChr06g0175231 Helianthus annuus HOM05D000004 ORTHO05D000002 3.4e-13 80.1 227 26.4
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-13 79.3 231 25.5
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.6e-13 79.0 139 28.8
Psat1g213840 Pisum sativum HOM05D000004 ORTHO05D000002 7.6e-13 79.0 190 23.7
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 7.6e-13 79.0 238 23.1
TWI09G0429 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.6e-13 79.0 299 22.1
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 9.9e-13 78.6 108 31.5
ECA240G3730 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-12 78.2 229 27.1
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 1.7e-12 77.8 230 27.8
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-12 77.8 230 27.8
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-12 77.8 230 27.8
BcaC07g37276 Brassica carinata HOM05D008905 ORTHO05D000002 2.2e-12 77.4 77 41.6
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-12 77.4 188 25.0
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 2.2e-12 77.4 134 26.9
AUR62006479 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.8e-12 76.6 272 25.4
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 3.8e-12 76.6 141 26.2
Sp4g02590 Schrenkiella parvula HOM05D014061 ORTHO05D000002 3.8e-12 76.6 116 37.1
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.4e-12 75.9 172 23.3
Ca_19472_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.4e-12 75.5 140 26.4
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 8.4e-12 75.5 226 24.3
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 8.4e-12 75.5 246 23.6
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-11 75.1 166 24.1
Nn2g14669 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.1e-11 75.1 136 27.9
Psat5g253800 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-11 75.1 136 28.7
ECA073G0002 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-11 74.7 220 27.7
THA.LOC104814705 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-11 74.7 197 26.9
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 1.9e-11 74.3 328 22.9
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 2.4e-11 73.9 201 23.9
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 2.4e-11 73.9 147 27.9
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.2e-11 73.6 139 27.3
Psat0s2458g0120 Pisum sativum HOM05D003122 ORTHO05D000002 3.2e-11 73.6 190 25.8
PSO339G6459 Papaver somniferum HOM05D000004 ORTHO05D000002 5.4e-11 72.8 169 26.6
RcHm_v2.0_Chr4g0426521 Rosa chinensis HOM05D018140 ORTHO05D000002 5.4e-11 72.8 279 25.1
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 5.4e-11 72.8 208 27.9
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-11 72.4 249 23.7
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-11 72.4 249 23.7
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 7.1e-11 72.4 149 23.5
MELO3C002493.2 Cucumis melo HOM05D000004 ORTHO05D000002 9.3e-11 72.0 146 29.5
Psat0s653g0040 Pisum sativum HOM05D000004 ORTHO05D000002 9.3e-11 72.0 213 24.9
VMungo1383G0727 Vigna mungo HOM05D000250 ORTHO05D002850 9.3e-11 72.0 137 24.8
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 1.2e-10 71.6 244 23.4
Ca_14712_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-10 71.6 237 23.2
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 1.2e-10 71.6 129 27.9
BcaB08g35524 Brassica carinata HOM05D014061 ORTHO05D000002 1.6e-10 71.2 180 32.8
ECA236G0535 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-10 71.2 239 24.3
Sp5g19760 Schrenkiella parvula HOM05D008905 ORTHO05D000002 2.1e-10 70.9 71 45.1
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 2.7e-10 70.5 139 28.8
Phvul.004G050550 Phaseolus vulgaris HOM05D000004 ORTHO05D000002 2.7e-10 70.5 301 23.6
Psat0s2745g0200 Pisum sativum HOM05D003122 ORTHO05D000002 3.5e-10 70.1 340 24.1
Manes.17G118357 Manihot esculenta HOM05D000004 ORTHO05D000002 4.6e-10 69.7 314 23.2
Psat0s2139g0080 Pisum sativum HOM05D003122 ORTHO05D000002 4.6e-10 69.7 222 24.8
BcaC05g27699 Brassica carinata HOM05D033294 ORTHO05D032665 6.0e-10 69.3 200 22.5
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-10 69.3 302 22.5
AL3G44670 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 1.0e-09 68.6 71 47.9
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.0e-09 68.6 144 22.9
CsaV3_6G019140 Cucumis sativus L. HOM05D016213 ORTHO05D000002 1.0e-09 68.6 208 26.0
Ca_10432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-09 68.2 240 21.7
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 1.3e-09 68.2 134 26.1
CiPaw.03G095100 Carya illinoinensis HOM05D000004 ORTHO05D000002 1.8e-09 67.8 310 20.6
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-09 67.8 139 29.5
Sed0004979 Sechium edule HOM05D000004 ORTHO05D000002 1.8e-09 67.8 196 25.5
Ah.16g109500 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.3e-09 67.4 143 28.7
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 2.3e-09 67.4 138 26.1
PSO170G1566 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-09 67.4 228 23.2
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-09 67.0 336 22.0
Sopen00g004920 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-09 67.0 170 25.3
Psat2g047800 Pisum sativum HOM05D000004 ORTHO05D000002 3.9e-09 66.6 185 25.9
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-09 66.6 250 24.4
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 3.9e-09 66.6 250 24.4
BcaC09g51720 Brassica carinata HOM05D000004 ORTHO05D000002 5.1e-09 66.2 73 32.9
Ca_11845_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.1e-09 66.2 174 22.4
CsaV3_1G011190 Cucumis sativus L. HOM05D000004 ORTHO05D000002 5.1e-09 66.2 205 24.4
ECA234G3749 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.1e-09 66.2 232 26.7
Sp6g12040 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.1e-09 66.2 203 25.1
Actinidia13475 Actinidia chinensis HOM05D000004 ORTHO05D000002 6.7e-09 65.9 215 25.1
ECA233G4375 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-09 65.9 231 24.7
BcaC09g48121 Brassica carinata HOM05D061184 ORTHO05D000002 8.7e-09 65.5 162 26.5
VMungo0720G2483 Vigna mungo HOM05D002038 ORTHO05D030727 8.7e-09 65.5 112 25.9
BolC4t21987H Brassica oleracea HOM05D029412 ORTHO05D027750 1.1e-08 65.1 117 35.0
ECA232G1905 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-08 65.1 237 23.2
ECA240G2607 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-08 65.1 249 22.5
Manes.17G016004 Manihot esculenta HOM05D000004 ORTHO05D000002 1.1e-08 65.1 295 22.4
PSO832G2085 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-08 65.1 301 23.3
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-08 65.1 156 23.7
BcaB07g31748 Brassica carinata HOM05D000004 ORTHO05D000002 1.5e-08 64.7 90 31.1
PSO478G0834 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-08 64.3 211 26.1
Sp4g07510 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.9e-08 64.3 117 29.1
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-08 63.9 198 23.7
THA.LOC104809111 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.5e-08 63.9 130 26.2
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.4e-08 62.4 250 22.8
CARHR218060 Cardamine hirsuta HOM05D008905 ORTHO05D000002 1.3e-07 61.6 74 41.9
Ca_12559_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-07 61.6 194 24.7
Sp4g08930 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.3e-07 61.6 142 33.8
Sp6g10260 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.3e-07 61.6 134 31.3
PSO111G0026 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-07 61.2 196 24.5
PSO063G2903 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-07 60.8 301 23.6
CsaV3_5G037150 Cucumis sativus L. HOM05D016213 ORTHO05D000002 2.8e-07 60.5 167 26.3
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 2.8e-07 60.5 162 27.2
BcaC02g11168 Brassica carinata HOM05D008905 ORTHO05D000002 3.7e-07 60.1 90 31.1
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-07 60.1 239 22.6
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-07 59.7 241 22.4
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.2e-07 59.3 276 21.7
SHI25069 Sapria himalayana HOM05D000004 ORTHO05D000002 6.2e-07 59.3 208 26.9
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 1.8e-06 57.8 101 27.7
Aa31LG4G9850 Aethionema arabicum HOM05D000004 ORTHO05D000002 2.4e-06 57.4 211 22.3
ClCG05G016400 Citrullus lanatus HOM05D000004 ORTHO05D000002 3.1e-06 57.0 213 23.9
MELO3C028848.2 Cucumis melo HOM05D009641 ORTHO05D013069 3.1e-06 57.0 104 28.8
VMungo1080G1583 Vigna mungo HOM05D001060 ORTHO05D010195 3.1e-06 57.0 130 23.1
Psat5g159360 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 56.6 233 21.0
Psat5g267400 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 56.6 256 22.3
Ca_23687_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.3e-06 56.2 139 24.5
PSO675G1170 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-06 56.2 159 21.4
SEGI_22100 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 5.3e-06 56.2 147 21.8
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 5.3e-06 56.2 110 25.5
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 6.9e-06 55.8 217 22.6
Ah.09g237740 Amaranthus hybridus HOM05D016549 ORTHO05D000002 6.9e-06 55.8 143 23.1
Ca_23727_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.9e-06 55.8 125 28.0
Ca_01976_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.0e-06 55.5 101 23.8
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 9.0e-06 55.5 317 21.8
Sed0022134 Sechium edule HOM05D000004 ORTHO05D000002 9.0e-06 55.5 324 18.5


User provided reference genes

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