Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 4.6e-120 434.5 206 100.0
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.1e-104 382.5 212 88.7
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 3.9e-103 378.3 214 86.9
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 3.9e-103 378.3 212 86.8
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 6.0e-96 354.4 214 82.7
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 7.9e-96 354.0 213 80.3
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.5e-94 349.7 212 80.2
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 1.5e-94 349.7 212 80.2
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 1.5e-94 349.7 212 80.2
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 5.6e-94 347.8 213 79.3
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 9.9e-91 337.0 208 79.8
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 2.7e-80 302.4 212 70.3
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 1.3e-79 300.1 211 69.2
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 7.2e-73 277.7 221 63.3
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 2.4e-68 262.7 219 60.3
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.5e-67 260.0 219 59.8
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 7.7e-67 257.7 219 60.3
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 1.0e-66 257.3 219 59.4
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.7e-66 256.5 219 59.4
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 2.2e-66 256.1 219 58.4
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 2.2e-66 256.1 218 59.2
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 6.5e-66 254.6 218 59.6
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 2.5e-65 252.7 218 56.9
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.2e-65 252.3 215 59.5
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 7.2e-65 251.1 218 59.2
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.6e-64 250.0 215 57.7
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 1.6e-64 250.0 214 58.4
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 2.1e-64 249.6 162 70.4
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 6.1e-64 248.1 217 58.5
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 6.1e-64 248.1 226 55.3
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.0e-63 247.3 221 57.5
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.8e-63 246.5 217 58.5
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 2.3e-63 246.1 209 61.7
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 2.3e-63 246.1 214 57.5
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 3.9e-63 245.4 215 59.1
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 3.9e-63 245.4 220 54.5
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 5.1e-63 245.0 220 54.5
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 1.1e-62 243.8 220 58.2
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.5e-62 243.4 218 57.8
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.5e-62 243.4 217 55.3
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 2.6e-62 242.7 222 55.9
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 3.3e-62 242.3 209 60.8
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 5.7e-62 241.5 215 58.1
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 7.4e-62 241.1 220 56.8
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 9.7e-62 240.7 178 64.0
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.3e-61 240.4 214 56.1
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.7e-61 240.0 216 56.5
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.7e-61 240.0 216 55.1
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 2.8e-61 239.2 161 65.8
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.8e-61 239.2 217 54.8
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 6.3e-61 238.0 221 53.4
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 8.2e-61 237.7 220 55.9
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 8.2e-61 237.7 220 55.9
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.4e-60 236.9 217 53.9
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 1.8e-60 236.5 216 57.4
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 5.3e-60 235.0 217 54.4
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 6.9e-60 234.6 187 59.4
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 9.1e-60 234.2 148 68.9
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 2.0e-59 233.0 175 61.7
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 3.4e-59 232.3 157 68.2
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 4.5e-59 231.9 216 54.6
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 4.5e-59 231.9 214 55.6
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 5.9e-59 231.5 217 56.7
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.0e-58 230.7 220 54.1
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 2.2e-58 229.6 218 54.6
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 2.2e-58 229.6 214 55.6
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 2.9e-58 229.2 161 63.4
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 3.8e-58 228.8 214 55.1
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 5.0e-58 228.4 141 72.3
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 8.5e-58 227.6 162 61.7
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.5e-57 226.1 208 55.8
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 2.5e-57 226.1 170 61.2
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 2.5e-57 226.1 224 52.2
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 3.2e-57 225.7 213 53.1
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 4.2e-57 225.3 213 55.4
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 9.4e-57 224.2 208 54.3
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 1.0e-55 220.7 162 63.6
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.0e-55 220.7 208 53.4
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.0e-55 220.7 194 56.7
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.8e-55 219.9 215 53.0
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.8e-55 219.9 215 52.1
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 3.0e-55 219.2 215 53.0
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 5.2e-55 218.4 220 55.5
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 6.7e-55 218.0 215 52.6
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 1.1e-54 217.2 149 67.8
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 3.3e-54 215.7 200 56.5
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 5.7e-54 214.9 211 54.5
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 2.8e-53 212.6 206 54.9
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 9.1e-52 207.6 137 65.0
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 8.5e-50 201.1 192 53.6
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 1.1e-49 200.7 210 48.1
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 3.2e-49 199.1 134 65.7
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 6.3e-45 184.9 157 53.5
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 5.5e-41 171.8 135 54.8
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 2.3e-39 166.4 134 51.5
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 4.0e-39 165.6 143 58.7
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 6.3e-37 158.3 137 52.6
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 3.5e-35 152.5 148 47.3
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 4.0e-31 139.0 135 46.7
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.2e-27 127.5 146 41.1
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.5e-27 125.9 82 65.9
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.6e-24 117.1 142 46.5
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 4.1e-20 102.4 52 82.7
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 6.0e-19 98.6 139 41.0
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 2.3e-18 96.7 162 32.7
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.4e-15 87.4 56 71.4
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 1.7e-10 70.5 44 68.2
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 3.4e-06 56.2 68 41.2
AUR62006400 Chenopodium quinoa HOM05D000161 ORTHO05D000111 5.8e-06 55.5 76 32.9


User provided reference genes

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