Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR233670 Cardamine hirsuta HOM05D000947 ORTHO05D000079 2.9e-94 348.6 180 100.0
Carub.0007s1480 Capsella rubella HOM05D000947 ORTHO05D000079 5.5e-61 238.0 184 73.9
C07p54720 Brassica napus HOM05D000947 ORTHO05D000079 6.7e-59 231.1 189 67.2
BolC7t45961H Brassica oleracea HOM05D000947 ORTHO05D000079 6.7e-59 231.1 189 67.2
A03p56530 Brassica napus HOM05D000947 ORTHO05D000079 4.4e-58 228.4 188 67.0
BraA03t14723Z Brassica rapa HOM05D000947 ORTHO05D000079 4.4e-58 228.4 188 68.1
BcaC06g32766 Brassica carinata HOM05D000947 ORTHO05D000079 5.7e-58 228.0 188 66.5
Sp7g24170 Schrenkiella parvula HOM05D000947 ORTHO05D000079 1.7e-57 226.5 190 68.9
AT4G26150 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 1.4e-56 223.4 187 71.1
Thhalv10025461m.g Eutrema salsugineum HOM05D000947 ORTHO05D000079 3.4e-55 218.8 185 69.2
AL7G26820 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 6.7e-43 177.9 133 78.2
BraA01t01698Z Brassica rapa HOM05D000947 ORTHO05D000079 4.1e-40 168.7 185 58.4
A01p17430 Brassica napus HOM05D000947 ORTHO05D000079 4.5e-39 165.2 185 57.3
BcaC09g50673 Brassica carinata HOM05D000947 ORTHO05D000079 1.0e-35 154.1 185 54.6
C01p21950 Brassica napus HOM05D000947 ORTHO05D000079 1.0e-35 154.1 185 54.6
BolC1t02124H Brassica oleracea HOM05D000947 ORTHO05D000079 1.0e-35 154.1 185 54.6
BcaNung02447 Brassica carinata HOM05D000947 ORTHO05D000079 3.4e-34 149.1 184 53.8
Aa31LG3G530 Aethionema arabicum HOM05D000947 ORTHO05D000079 9.8e-34 147.5 180 54.4
C03p15340 Brassica napus HOM05D000947 ORTHO05D000079 8.6e-30 134.4 187 54.5
BolC3t13976H Brassica oleracea HOM05D000947 ORTHO05D000079 7.2e-29 131.3 187 53.5
BcaC04g20049 Brassica carinata HOM05D000947 ORTHO05D000079 2.8e-28 129.4 180 55.0
C09p48470 Brassica napus HOM05D000947 ORTHO05D000079 2.8e-28 129.4 180 55.0
BolC9t57690H Brassica oleracea HOM05D000947 ORTHO05D000079 2.8e-28 129.4 180 55.0
BraA10t43506Z Brassica rapa HOM05D000947 ORTHO05D000079 2.3e-27 126.3 182 53.3
Thhalv10013793m.g Eutrema salsugineum HOM05D000947 ORTHO05D000079 2.3e-27 126.3 188 55.9
BcaC03g14201 Brassica carinata HOM05D000947 ORTHO05D000079 3.0e-27 125.9 181 53.0
C02p14870 Brassica napus HOM05D000947 ORTHO05D000079 3.0e-27 125.9 181 53.0
BolC2t07616H Brassica oleracea HOM05D000947 ORTHO05D000079 3.0e-27 125.9 181 53.0
AL8G32710 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 5.2e-27 125.2 183 54.6
A10p14140 Brassica napus HOM05D000947 ORTHO05D000079 6.8e-27 124.8 182 52.7
Carub.0008s1732 Capsella rubella HOM05D000947 ORTHO05D000079 8.8e-27 124.4 189 55.6
Sp6g18580 Schrenkiella parvula HOM05D000947 ORTHO05D000079 1.2e-26 124.0 182 54.9
BcaB05g22295 Brassica carinata HOM05D000947 ORTHO05D000079 1.5e-26 123.6 190 53.2
THA.LOC104813261 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 1.5e-26 123.6 163 53.4
CARHR270600 Cardamine hirsuta HOM05D000947 ORTHO05D000079 2.0e-26 123.2 181 54.7
AT5G56860 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 7.5e-26 121.3 187 54.0
A02p08910 Brassica napus HOM05D000947 ORTHO05D000079 1.3e-25 120.6 188 52.7
BraA02t05960Z Brassica rapa HOM05D000947 ORTHO05D000079 3.7e-25 119.0 188 52.1
BcaB08g36050 Brassica carinata HOM05D000947 ORTHO05D000079 6.3e-25 118.2 187 50.8
THA.LOC104818113 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 1.1e-24 117.5 181 46.4
Aa31LG3G12760 Aethionema arabicum HOM05D000947 ORTHO05D000079 2.0e-23 113.2 197 49.7
BcaB01g04423 Brassica carinata HOM05D000947 ORTHO05D000079 3.3e-21 105.9 177 48.6
A03p13120 Brassica napus HOM05D000947 ORTHO05D000079 6.4e-17 91.7 110 58.2
BraA03t10623Z Brassica rapa HOM05D000947 ORTHO05D000079 6.4e-17 91.7 110 58.2


User provided reference genes

Program Settings