Gene: AT4G26150
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G26150
- Transcript Identifier AT4G26150.1
- Gene Type Coding gene
- Location Chr4 : 13253210-13254659 : positive
Gene Family Information
- ID HOM05D000947
- #Genes/#Species 633/92
- Phylogenetic origin
- ID ORTHO05D000079
- #Genes/#Species 2384/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G26150.1
- symbol CGA1
- Alias GATA22,GATA TRANSCRIPTION FACTOR 22,GNL,GNC-LIKE
- uniprot Q9SZI6
Descriptions
- Description cytokinin-responsive gata factor 1
- Computational description cytokinin-responsive gata factor 1 (CGA1); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT5G56860.1); Has 1630 Blast hits to 1587 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 659; Plants - 751; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009736 | IEA | GOA Database | cytokinin-activated signaling pathway | |
| GO:0009736 | IMP | Gene Ontology | cytokinin-activated signaling pathway | 1 |
| GO:0090693 | IMP | Gene Ontology | plant organ senescence | 2 |
| GO:0009658 | IMP | Gene Ontology | chloroplast organization | 1 |
| GO:0010151 | IMP | Gene Ontology | chloroplast elongation | 1 |
| GO:0009733 | IEP | Gene Ontology | response to auxin | 3 |
| GO:0080050 | IMP | Gene Ontology | regulation of seed development | 2 |
| GO:0009740 | IEA | GOA Database | gibberellic acid mediated signaling pathway | |
| GO:0009740 | IEP | Gene Ontology | gibberellic acid mediated signaling pathway | 4 |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | Os02g0220400 |
| GO:0099402 | ISO | PLAZA Integrative Orthology | plant organ development | Os02g0220400 |
| GO:1901698 | ISO | PLAZA Integrative Orthology | response to nitrogen compound | Os02g0220400 |
| GO:0009646 | ISO | PLAZA Integrative Orthology | response to absence of light | Os02g0220400 |
| GO:0009739 | IEP | Gene Ontology | response to gibberellin | 4 |
| GO:0009735 | IEP | Gene Ontology | response to cytokinin | 5 |
| GO:0010167 | TAS | Gene Ontology | response to nitrate | 6 |
| GO:0007623 | IEP | Gene Ontology | circadian rhythm | 7 |
| GO:0009416 | IEP | Gene Ontology | response to light stimulus | 7 |
| GO:0010114 | IEP | Gene Ontology | response to red light | 8 |
| GO:0043610 | IMP | Gene Ontology | regulation of carbohydrate utilization | 9 |
| GO:1902326 | IMP | Gene Ontology | positive regulation of chlorophyll biosynthetic process | 9 |
| GO:0009910 | IMP | Gene Ontology | negative regulation of flower development | 4 |
| GO:0009938 | IMP | Gene Ontology | negative regulation of gibberellic acid mediated signaling pathway | 4 |
| GO:0010029 | IMP | Gene Ontology | regulation of seed germination | 4 |
| GO:0010187 | IEP | Gene Ontology | negative regulation of seed germination | 4 |
| GO:2000028 | IMP | Gene Ontology | regulation of photoperiodism, flowering | 4 |
| GO:0010380 | IMP | Gene Ontology | regulation of chlorophyll biosynthetic process | 2 |
| GO:0010468 | IDA | Gene Ontology | regulation of gene expression | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 10 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 11 |
| GO:0000976 | IDA | Gene Ontology | transcription cis-regulatory region binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IMP ISM | Gene Ontology | nucleus | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.1.3.1 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA) |