Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 7.4e-164 580.5 294 100.0
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.5e-150 535.0 295 92.5
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 5.1e-149 531.2 298 90.9
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 5.1e-149 531.2 298 90.9
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 5.3e-146 521.2 299 89.3
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 1.3e-139 500.0 299 88.6
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 8.2e-139 497.3 295 85.8
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.6e-132 475.7 302 84.8
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 4.8e-131 471.5 303 82.5
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 4.8e-131 471.5 303 82.5
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 6.3e-131 471.1 303 82.2
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.2e-129 466.8 304 82.6
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.2e-129 466.8 304 82.6
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 1.7e-120 436.4 295 76.9
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.0e-104 384.0 289 68.2
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 3.3e-103 379.0 299 67.2
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 3.3e-103 379.0 256 72.3
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 9.5e-103 377.5 299 66.2
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 2.1e-102 376.3 252 73.8
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 3.6e-102 375.6 287 67.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.0e-101 374.0 248 75.0
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.0e-101 374.0 256 74.2
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 3.0e-101 372.5 256 73.8
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.2e-100 370.5 300 64.3
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.2e-100 370.5 308 63.6
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.2e-100 370.5 308 63.6
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.5e-100 370.2 302 65.2
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 2.0e-100 369.8 305 63.3
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 2.0e-100 369.8 287 65.9
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 4.4e-100 368.6 291 67.7
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 4.4e-100 368.6 290 65.5
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 5.7e-100 368.2 268 69.8
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 9.8e-100 367.5 246 74.4
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.7e-99 366.7 252 71.8
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.7e-99 366.7 308 62.3
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 3.7e-99 365.5 292 65.1
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 6.4e-99 364.8 302 64.2
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.8e-98 363.2 305 63.9
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 2.4e-98 362.8 289 64.4
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 4.1e-98 362.1 308 61.7
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 7.0e-98 361.3 300 61.3
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 9.2e-98 360.9 212 81.6
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.6e-97 360.1 294 64.3
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 2.7e-97 359.4 264 70.5
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 4.6e-97 358.6 252 70.2
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.6e-97 358.6 307 61.6
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 1.0e-96 357.5 261 67.8
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 1.3e-96 357.1 298 62.8
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 3.9e-96 355.5 248 71.8
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.1e-95 354.0 267 65.2
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.1e-95 354.0 263 66.5
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 3.3e-95 352.4 299 61.2
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 7.3e-95 351.3 290 61.4
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 9.5e-95 350.9 291 63.2
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 1.2e-94 350.5 292 63.7
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 4.7e-94 348.6 250 68.0
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 2.3e-93 346.3 255 66.3
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 6.8e-93 344.7 212 78.3
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 8.9e-93 344.4 289 62.6
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.2e-92 344.0 250 66.8
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.5e-92 343.6 250 66.8
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.4e-92 342.4 245 71.0
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 5.8e-92 341.7 252 67.1
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 5.8e-92 341.7 248 66.9
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 9.8e-92 340.9 291 61.5
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.4e-90 337.0 253 65.6
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 3.2e-90 335.9 250 67.2
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.2e-90 334.3 280 61.4
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.6e-89 333.6 246 64.6
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 2.0e-89 333.2 252 65.9
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 6.0e-89 331.6 247 65.6
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 7.8e-89 331.3 300 58.0
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.3e-88 330.5 287 59.9
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 3.0e-88 329.3 258 65.1
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 2.5e-87 326.2 252 63.9
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 3.3e-87 325.9 239 66.9
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 3.3e-87 325.9 268 61.6
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 4.3e-87 325.5 245 66.1
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 8.1e-86 321.2 277 60.3
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.8e-85 320.1 245 64.5
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.8e-85 320.1 247 63.6
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 2.3e-85 319.7 277 60.3
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.4e-83 311.6 297 56.2
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 5.4e-82 308.5 294 58.2
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 7.1e-82 308.1 228 68.4
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 2.3e-80 303.1 357 49.6
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 3.0e-80 302.8 245 64.5
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 5.2e-77 292.0 251 61.8
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.2e-76 290.8 270 58.9
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.2e-75 286.6 226 64.6
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.2e-73 280.8 223 64.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.0e-73 278.5 217 65.9
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.1e-69 267.7 299 48.5
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.4e-69 267.3 182 70.9
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 5.2e-69 265.4 206 65.5
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.7e-67 260.4 287 52.6
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 4.9e-67 258.8 158 80.4
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 7.1e-66 255.0 213 63.4
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 5.1e-64 248.8 256 51.6
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.9e-63 246.9 320 45.6
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.9e-63 246.9 218 59.6
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.9e-63 246.9 218 59.6
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 6.9e-61 238.4 167 68.3
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.8e-53 213.8 175 61.7
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 9.3e-42 174.9 101 76.2
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.0e-40 171.4 130 66.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 3.3e-39 166.4 295 35.9
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.1e-31 141.4 107 60.7
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 3.8e-27 126.3 195 36.4
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 6.1e-09 65.9 101 38.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.0e-08 63.5 52 59.6
Gohir.A05G300500 Gossypium hirsutum HOM05D002933 ORTHO05D007742 1.2e-07 61.6 266 21.8


User provided reference genes

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