Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.4e-181 639.8 391 100.0
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 9.2e-154 547.4 392 88.8
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.2e-153 547.0 389 88.9
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 3.4e-148 528.9 391 86.2
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 4.6e-145 518.5 394 84.5
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 9.5e-143 510.8 344 88.4
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.2e-142 510.4 344 88.4
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.2e-142 510.4 344 88.4
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 3.6e-142 508.8 344 88.1
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 2.6e-124 449.5 390 78.5
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.1e-117 427.6 344 84.6
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.9e-104 382.5 286 72.7
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 3.1e-101 372.9 283 71.7
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 4.1e-101 372.5 289 67.5
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.5e-100 370.5 281 68.3
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 4.5e-100 369.0 287 70.4
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.2e-99 366.7 286 71.3
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.9e-99 366.3 321 66.7
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 2.9e-99 366.3 286 70.6
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.5e-99 365.2 281 68.0
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 6.5e-99 365.2 287 68.3
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.4e-98 364.0 281 67.6
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.2e-98 362.8 288 68.8
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 4.2e-98 362.5 286 68.9
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.5e-98 362.1 299 72.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 7.2e-98 361.7 284 70.1
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.2e-97 360.9 288 69.8
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.2e-97 360.9 295 68.1
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 3.5e-97 359.4 284 69.7
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 4.6e-97 359.0 288 66.7
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.0e-96 357.8 287 67.9
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.0e-96 357.8 287 69.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.3e-96 357.5 288 67.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 2.3e-96 356.7 241 74.7
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 2.3e-96 356.7 284 75.0
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 5.1e-96 355.5 282 70.6
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 6.7e-96 355.1 282 69.5
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 6.7e-96 355.1 318 66.7
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.1e-95 354.4 278 68.3
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.5e-95 354.0 326 60.1
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.9e-95 353.6 252 72.6
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 4.3e-95 352.4 286 68.5
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 5.7e-95 352.1 283 66.8
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 7.4e-95 351.7 233 78.1
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 9.7e-95 351.3 318 63.5
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 9.7e-95 351.3 271 68.3
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 3.7e-94 349.4 347 64.0
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 6.3e-94 348.6 245 75.9
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 1.4e-93 347.4 287 65.9
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.4e-93 347.4 253 68.0
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 3.1e-93 346.3 270 70.4
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 4.1e-93 345.9 255 78.4
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 6.9e-93 345.1 280 67.5
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 6.9e-93 345.1 245 70.6
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 9.0e-93 344.7 288 66.7
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 9.0e-93 344.7 236 76.3
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.2e-92 344.4 319 63.3
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 1.5e-92 344.0 245 73.5
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 3.4e-92 342.8 261 72.0
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 7.7e-92 341.7 281 67.6
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.0e-91 341.3 312 62.8
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 2.9e-91 339.7 268 69.8
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 5.0e-91 339.0 310 61.3
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.5e-90 336.7 223 76.2
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 4.2e-90 335.9 288 67.4
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 4.2e-90 335.9 259 76.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 8.8e-88 328.2 282 62.4
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 8.8e-88 328.2 281 61.9
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.5e-87 327.4 304 67.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 1.5e-87 327.4 244 72.5
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 5.7e-87 325.5 232 73.7
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 5.5e-82 308.9 251 68.1
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 9.4e-82 308.1 259 67.2
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 2.1e-81 307.0 234 70.9
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 2.0e-79 300.4 234 65.0
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.2e-78 297.0 321 57.3
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.4e-77 294.3 222 68.5
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 2.7e-73 280.0 212 68.9
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 5.5e-66 255.8 155 78.1
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 3.7e-62 243.0 165 73.9
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 2.0e-60 237.3 162 71.6
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.8e-56 224.2 193 66.8
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.8e-53 214.2 242 52.9
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 4.1e-53 213.0 246 51.6
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 3.5e-52 209.9 191 65.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 8.6e-51 205.3 168 69.6
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.2e-49 201.4 193 62.7
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 3.4e-47 193.4 190 63.2
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 4.7e-41 172.9 110 80.9
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 9.8e-39 165.2 227 48.5
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 6.4e-38 162.5 233 39.5
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 7.5e-31 139.0 115 74.8
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 2.2e-30 137.5 155 45.8
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 6.8e-24 115.9 73 86.3


User provided reference genes

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