Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.2e-183 646.4 326 100.0
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.4e-155 553.1 326 85.6
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 4.2e-152 541.6 317 86.4
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 6.1e-151 537.7 317 86.4
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 1.1e-149 533.5 317 84.5
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 2.6e-149 532.3 313 85.6
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 5.3e-147 524.6 313 85.6
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.2e-146 523.5 330 84.2
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 6.5e-145 517.7 318 84.9
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 1.6e-143 513.1 319 84.6
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 1.0e-142 510.4 319 84.0
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 4.8e-140 501.5 319 83.4
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 6.7e-134 481.1 312 79.5
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 1.2e-122 443.7 317 71.9
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 2.4e-107 392.9 317 64.0
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 7.0e-107 391.3 316 63.9
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.2e-106 390.6 320 63.8
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 2.7e-106 389.4 320 63.4
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 6.0e-106 388.3 318 61.9
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 2.3e-105 386.3 316 63.6
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 1.1e-104 384.0 316 63.0
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 3.3e-104 382.5 315 61.6
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 5.6e-104 381.7 316 62.7
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 7.3e-104 381.3 316 62.7
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 3.1e-102 375.9 316 61.1
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 6.8e-102 374.8 315 61.0
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 1.2e-101 374.0 315 61.6
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 2.6e-101 372.9 316 61.1
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 4.4e-101 372.1 316 61.7
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 5.8e-101 371.7 326 59.2
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 7.5e-101 371.3 316 61.4
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 7.5e-101 371.3 315 61.9
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 1.3e-100 370.5 316 60.1
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 2.9e-100 369.4 316 59.5
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 6.4e-100 368.2 319 60.8
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 8.3e-100 367.9 316 60.8
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 2.4e-99 366.3 316 60.4
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 4.1e-99 365.5 318 60.7
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 9.2e-99 364.4 315 59.4
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.2e-98 364.0 318 60.4
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 1.2e-98 364.0 316 60.8
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 4.6e-98 362.1 315 58.4
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 4.6e-98 362.1 318 60.4
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 1.7e-97 360.1 318 59.4
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 3.0e-97 359.4 297 62.3
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 5.0e-97 358.6 318 59.7
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 5.0e-97 358.6 315 58.4
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 9.5e-96 354.4 327 58.4
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.8e-94 350.1 316 57.6
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.1e-94 349.4 317 59.0
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 3.1e-94 349.4 309 57.9
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 5.2e-94 348.6 327 56.9
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 8.9e-94 347.8 316 56.6
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 1.2e-93 347.4 319 58.6
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 2.6e-93 346.3 313 58.8
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 2.6e-93 346.3 319 56.7
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.4e-93 345.9 319 58.6
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 4.4e-93 345.5 290 61.7
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 5.8e-93 345.1 315 56.8
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 9.9e-93 344.4 336 54.8
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 2.9e-92 342.8 313 58.5
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.9e-91 340.1 315 56.8
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.4e-91 339.7 281 61.9
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 1.2e-90 337.4 314 58.0
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.2e-90 337.4 304 57.2
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 1.6e-90 337.0 320 54.4
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 4.6e-90 335.5 312 57.7
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 1.0e-89 334.3 306 56.9
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.3e-89 333.2 305 56.4
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 5.1e-89 332.0 306 56.9
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 6.6e-89 331.6 308 57.5
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 8.6e-89 331.3 326 55.2
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 8.6e-89 331.3 306 56.5
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.3e-88 329.3 279 59.9
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 4.7e-87 325.5 320 55.9
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 4.7e-87 325.5 331 53.2
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.4e-86 323.9 312 55.1
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 1.8e-86 323.6 301 57.8
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 5.2e-86 322.0 272 61.8
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 4.4e-85 318.9 314 54.5
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.6e-82 310.5 325 54.2
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.0e-81 306.2 311 55.0
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 4.7e-79 298.9 313 50.2
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 3.4e-77 292.7 310 51.6
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 9.9e-77 291.2 285 54.0
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.4e-76 288.5 321 52.3
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 2.7e-74 283.1 321 47.4
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 9.6e-72 274.6 317 46.1
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.3e-71 274.2 314 48.7
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.8e-70 270.4 331 44.7
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.0e-70 269.2 311 47.6
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 8.4e-68 261.5 249 51.8
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.1e-62 243.0 218 59.6
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 2.6e-61 240.0 251 48.2
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 9.9e-61 238.0 214 60.3
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.3e-60 237.7 244 54.9
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 6.0e-58 228.8 247 46.2
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 7.9e-58 228.4 195 56.4
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.5e-56 224.2 211 57.3
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.5e-56 224.2 265 47.9
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 4.5e-53 212.6 181 55.2
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 1.0e-52 211.5 189 55.6
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 4.9e-52 209.1 164 64.6
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 3.5e-50 203.0 212 52.4
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 2.2e-47 193.7 174 55.7
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 5.9e-45 185.7 322 37.9
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 8.5e-44 181.8 267 40.8
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.4e-41 174.5 318 38.7
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 3.7e-39 166.4 166 53.0
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 4.8e-39 166.0 234 44.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 7.7e-37 158.7 146 62.3
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 1.1e-32 144.8 139 61.2
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 3.1e-30 136.7 89 68.5
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 3.4e-29 133.3 89 69.7
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 3.2e-27 126.7 137 56.2
AL1G13210 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 4.0e-17 93.2 62 75.8
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.6e-16 90.5 57 68.4
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.3e-15 88.2 76 61.8
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 1.1e-14 85.1 277 27.8
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 2.0e-13 80.9 248 25.0
AL1G10030 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 7.7e-13 79.0 54 72.2
AL4G27190 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 2.2e-12 77.4 54 70.4
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 2.9e-12 77.0 275 25.8
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 9.4e-11 72.0 62 48.4


User provided reference genes

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