Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.7e-44 182.2 84 100.0
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 2.8e-31 138.3 82 76.8
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.4e-30 136.0 82 76.8
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-30 135.2 82 75.6
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.3e-30 135.2 82 76.8
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 4.0e-30 134.4 82 75.6
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.2e-30 134.0 82 74.4
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 6.8e-30 133.7 82 74.4
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 6.8e-30 133.7 82 74.4
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 8.9e-30 133.3 82 74.4
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.9e-30 133.3 82 75.6
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 1.2e-29 132.9 82 74.4
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-29 132.9 82 74.4
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 1.2e-29 132.9 82 74.4
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 1.5e-29 132.5 82 74.4
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 1.5e-29 132.5 82 74.4
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.0e-29 132.1 82 73.2
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 2.0e-29 132.1 82 74.4
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 2.0e-29 132.1 82 74.4
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 2.0e-29 132.1 82 74.4
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 7.5e-29 130.2 82 73.2
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 7.5e-29 130.2 82 74.4
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 7.5e-29 130.2 82 73.2
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 9.8e-29 129.8 82 72.0
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 9.8e-29 129.8 82 72.0
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 9.8e-29 129.8 82 72.0
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 9.8e-29 129.8 82 72.0
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 1.3e-28 129.4 82 73.2
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.3e-28 129.4 82 72.0
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.7e-28 129.0 82 70.7
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 1.7e-28 129.0 82 73.2
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.7e-28 129.0 82 70.7
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.2e-28 128.6 82 73.2
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 2.9e-28 128.3 82 70.7
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 2.9e-28 128.3 82 73.2
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.9e-28 128.3 82 70.7
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 3.7e-28 127.9 82 73.2
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 6.4e-28 127.1 82 72.0
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.3e-28 126.7 82 69.5
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.1e-27 126.3 82 69.5
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.1e-27 126.3 82 70.7
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-27 125.9 82 70.7
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 1.4e-27 125.9 82 70.7
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.1e-27 124.4 82 68.3
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.1e-27 124.4 82 68.3
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 9.2e-27 123.2 82 67.1
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 9.2e-27 123.2 82 69.5
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-26 122.5 82 68.3
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 2.0e-26 122.1 82 69.5
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 2.7e-26 121.7 82 67.1
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 2.7e-26 121.7 82 67.1
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.7e-26 121.7 82 69.5
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 3.5e-26 121.3 82 67.1
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 3.5e-26 121.3 82 67.1
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 7.8e-26 120.2 82 67.1
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 1.7e-25 119.0 82 68.3
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 1.1e-24 116.3 82 64.6
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 1.1e-24 116.3 82 64.6
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.9e-24 115.5 82 68.3
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 3.3e-24 114.8 82 67.1
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 3.3e-24 114.8 82 64.6
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 3.3e-24 114.8 82 64.6
CARHR069380 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.3e-24 114.8 79 68.4
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 4.3e-24 114.4 83 61.4
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 5.6e-24 114.0 82 61.0
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 5.6e-24 114.0 82 61.0
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 5.6e-24 114.0 82 61.0
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 5.6e-24 114.0 82 61.0
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-23 111.3 82 63.4
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-23 111.3 82 63.4
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 6.2e-23 110.5 82 59.8
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 4.0e-22 107.8 83 62.7
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 1.5e-21 105.9 94 56.4
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.0e-21 105.5 61 72.1
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.6e-21 105.1 82 63.4
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.3e-20 102.8 82 57.3
CARHR069260 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.7e-20 102.4 82 62.2
Aqoxy4G00455 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 1.1e-19 99.8 59 69.5
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.1e-18 95.5 83 60.2
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.7e-18 95.1 82 56.1
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 4.6e-18 94.4 82 57.3
BcaC08g47323 Brassica carinata HOM05D002484 ORTHO05D002541 9.5e-16 86.7 46 73.9
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 9.5e-16 86.7 82 52.4
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-14 82.8 82 52.4
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 1.4e-14 82.8 84 53.6
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 3.4e-13 78.2 84 51.2
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 2.2e-12 75.5 87 49.4
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 1.1e-11 73.2 82 41.5
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 1.1e-11 73.2 82 41.5
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.4e-11 72.8 83 47.0
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-11 72.4 82 39.0
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 1.9e-11 72.4 82 39.0
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 2.4e-11 72.0 82 40.2
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 2.4e-11 72.0 82 39.0
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 5.4e-11 70.9 82 39.0
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 7.1e-11 70.5 83 45.8
BcaC08g47076 Brassica carinata HOM05D002484 ORTHO05D002541 9.2e-11 70.1 51 70.6
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 9.2e-11 70.1 82 37.8
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-10 69.7 82 40.2
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 2.7e-10 68.6 82 39.0
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 3.5e-10 68.2 82 36.6
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 6.0e-10 67.4 82 37.8
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 6.0e-10 67.4 82 36.6
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 7.8e-10 67.0 82 36.6
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 1.0e-09 66.6 82 36.6
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 1.7e-09 65.9 82 36.6
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 5.1e-09 64.3 82 35.4
Hma1.2p1_1051F.1_g252040 Hydrangea macrophylla HOM05D002484 ORTHO05D002541 8.7e-09 63.5 84 40.5
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 2.5e-08 62.0 82 34.1
ECA236G2706 Erigeron canadensis HOM05D002484 ORTHO05D002541 2.5e-08 62.0 83 39.8
Thhalv10009242m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 7.3e-08 60.5 78 38.5
AL1G32330 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 9.6e-08 60.1 78 37.2
BolC8t49576H Brassica oleracea HOM05D002484 ORTHO05D002541 9.6e-08 60.1 60 41.7
Carub.0001s1915 Capsella rubella HOM05D002484 ORTHO05D002541 9.6e-08 60.1 82 34.1
Atru.chr5.3054 Acer truncatum HOM05D002484 ORTHO05D002541 1.2e-07 59.7 73 37.0
AT1G19610 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.6e-07 59.3 78 37.2
Sp1g17450 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.6e-07 59.3 50 44.0
HanXRQChr16g0505511 Helianthus annuus HOM05D002484 ORTHO05D002541 2.1e-07 58.9 77 39.0
Prupe.1G376000 Prunus persica HOM05D002484 ORTHO05D002541 2.1e-07 58.9 50 46.0
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.8e-07 58.5 82 36.6
COL.COLO4_25964 Corchorus olitorius HOM05D002484 ORTHO05D002541 2.8e-07 58.5 82 36.6
BcaB03g12908 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-07 58.2 78 38.5
HanXRQChr16g0505521 Helianthus annuus HOM05D002484 ORTHO05D002541 3.6e-07 58.2 82 39.0
Aa31LG7G4230 Aethionema arabicum HOM05D002484 ORTHO05D002541 4.7e-07 57.8 50 42.0
BraA08t34910Z Brassica rapa HOM05D002484 ORTHO05D002541 4.7e-07 57.8 78 38.5
AL8G15430 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.2e-07 57.4 40 77.5
BraA07t31673Z Brassica rapa HOM05D002484 ORTHO05D002541 6.2e-07 57.4 41 75.6
PGR031G0268 Punica granatum HOM05D002484 ORTHO05D002541 6.2e-07 57.4 82 35.4
HanXRQChr16g0505831 Helianthus annuus HOM05D002484 ORTHO05D002541 8.1e-07 57.0 77 36.4
DCAR_028974 Daucus carota HOM05D002484 ORTHO05D002541 1.1e-06 56.6 77 36.4
ECA236G3870 Erigeron canadensis HOM05D002484 ORTHO05D002541 1.1e-06 56.6 51 47.1
HanXRQChr03g0074221 Helianthus annuus HOM05D002484 ORTHO05D002541 1.1e-06 56.6 55 40.0
HanXRQChr03g0074231 Helianthus annuus HOM05D002484 ORTHO05D002541 1.1e-06 56.6 55 40.0
HanXRQChr03g0074241 Helianthus annuus HOM05D002484 ORTHO05D002541 1.1e-06 56.6 55 40.0
Atru.chr5.3052 Acer truncatum HOM05D002484 ORTHO05D002541 1.4e-06 56.2 68 39.7
Lsat_1_v5_gn_5_65860 Lactuca sativa HOM05D002484 ORTHO05D002541 1.8e-06 55.8 82 37.8
Lsat_1_v5_gn_7_90700 Lactuca sativa HOM05D002484 ORTHO05D002541 1.8e-06 55.8 58 43.1
CARHR247530 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.1e-06 55.1 82 32.9
Carub.0007s0110 Capsella rubella HOM05D002484 ORTHO05D002541 5.2e-06 54.3 82 30.5


User provided reference genes

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