Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.1e-40 167.5 81 100.0
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.2e-26 122.9 82 78.0
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.5e-26 122.5 82 78.0
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 3.7e-25 117.9 82 74.4
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.7e-25 117.9 81 71.6
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.3e-25 116.7 82 74.4
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 1.1e-24 116.3 82 75.6
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 1.1e-24 116.3 82 74.4
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-24 115.9 82 75.6
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-24 115.9 82 75.6
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.4e-24 115.2 82 73.2
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.4e-24 115.2 82 73.2
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.4e-24 115.2 82 72.0
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.4e-24 115.2 82 73.2
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.2e-24 114.8 82 74.4
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 4.1e-24 114.4 82 75.6
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 4.1e-24 114.4 82 75.6
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.4e-24 114.0 82 73.2
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 7.0e-24 113.6 82 75.6
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 7.0e-24 113.6 82 74.4
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 7.0e-24 113.6 82 74.4
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 7.0e-24 113.6 82 74.4
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 9.2e-24 113.2 82 72.0
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 73.2
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 73.2
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 73.2
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 73.2
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 72.0
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 1.6e-23 112.5 82 72.0
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.0e-23 112.1 82 72.0
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 2.7e-23 111.7 82 73.2
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 3.5e-23 111.3 82 70.7
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 3.5e-23 111.3 82 72.0
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 5.9e-23 110.5 82 70.7
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.9e-23 110.5 82 70.7
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 7.8e-23 110.2 82 72.0
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 7.8e-23 110.2 82 72.0
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 7.8e-23 110.2 82 74.4
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.0e-22 109.8 82 73.2
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.0e-22 109.8 82 73.2
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 2.3e-22 108.6 82 68.3
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 2.3e-22 108.6 82 68.3
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 3.0e-22 108.2 82 73.2
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 3.0e-22 108.2 82 73.2
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 3.9e-22 107.8 82 68.3
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 5.0e-22 107.5 82 67.1
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 5.0e-22 107.5 82 68.3
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 5.0e-22 107.5 82 67.1
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 5.0e-22 107.5 82 67.1
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 5.0e-22 107.5 82 68.3
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 6.6e-22 107.1 82 73.2
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 1.1e-21 106.3 82 70.7
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.1e-21 106.3 82 69.5
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 1.5e-21 105.9 82 68.3
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 2.5e-21 105.1 82 69.5
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 2.5e-21 105.1 82 69.5
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.5e-21 105.1 82 70.7
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 7.3e-21 103.6 83 68.7
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 7.3e-21 103.6 82 67.1
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 9.5e-21 103.2 82 67.1
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 9.5e-21 103.2 82 67.1
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 3.6e-20 101.3 82 68.3
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 1.8e-19 99.0 82 67.1
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-19 98.6 94 58.5
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 4.0e-19 97.8 84 66.7
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.0e-19 97.8 82 63.4
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.5e-18 95.9 83 60.2
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 3.4e-18 94.7 82 65.9
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 7.5e-18 93.6 82 59.8
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 7.5e-18 93.6 82 58.5
CARHR069380 Cardamine hirsuta HOM05D002484 ORTHO05D002541 9.8e-18 93.2 78 64.1
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.9e-17 91.7 66 68.2
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 3.7e-17 91.3 82 65.9
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 4.6e-15 84.3 84 59.5
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 4.6e-15 84.3 84 59.5
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 4.6e-15 84.3 84 59.5
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 4.6e-15 84.3 84 59.5
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-14 82.0 82 50.0
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.6e-14 80.1 84 57.1
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 1.1e-13 79.7 82 48.8
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.5e-13 79.3 82 56.1
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 1.9e-13 79.0 82 48.8
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 1.9e-13 79.0 82 57.3
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 3.3e-13 78.2 82 48.8
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 3.3e-13 78.2 82 57.3
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 3.3e-13 78.2 82 48.8
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 4.3e-13 77.8 81 48.1
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 5.6e-13 77.4 82 56.1
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 9.5e-13 76.6 82 48.8
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 9.5e-13 76.6 82 47.6
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-12 76.3 82 47.6
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-12 75.9 82 48.8
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-12 75.9 82 47.6
CARHR069260 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.6e-12 75.9 82 57.3
Aqoxy4G00455 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 4.7e-12 74.3 59 66.1
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 6.2e-12 73.9 87 54.0
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 6.8e-11 70.5 83 53.0
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 1.2e-10 69.7 82 46.3
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 1.5e-10 69.3 82 45.1
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 2.0e-10 68.9 82 46.3
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 2.6e-10 68.6 82 43.9
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 5.8e-10 67.4 82 45.1
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 9.9e-10 66.6 82 45.1
BcaC08g47323 Brassica carinata HOM05D002484 ORTHO05D002541 6.4e-09 63.9 48 62.5
AL8G15430 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 8.3e-09 63.5 38 86.8
BraA07t31673Z Brassica rapa HOM05D002484 ORTHO05D002541 9.2e-08 60.1 43 79.1
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.6e-07 59.3 83 44.6
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 7.8e-07 57.0 83 43.4
BcaC08g47076 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-06 55.5 48 68.8
DCAR_028974 Daucus carota HOM05D002484 ORTHO05D002541 3.0e-06 55.1 84 40.5
Ciclev10030125m.g Citrus clementina HOM05D002484 ORTHO05D002541 6.6e-06 53.9 82 40.2


User provided reference genes

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