Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR058670 Cardamine hirsuta HOM05D000390 ORTHO05D001192 2.6e-45 184.9 85 100.0
CARHR058650 Cardamine hirsuta HOM05D000390 ORTHO05D001192 3.9e-41 171.0 85 92.9
Carub.0002s1270 Capsella rubella HOM05D000390 ORTHO05D001192 6.7e-33 143.7 86 76.7
AL2G24590 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 7.4e-32 140.2 86 76.7
AT1G66620 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 1.3e-31 139.4 85 72.9
Carub.0002s1269 Capsella rubella HOM05D000390 ORTHO05D001192 1.3e-28 129.4 86 69.8
Sp5g24750 Schrenkiella parvula HOM05D000390 ORTHO05D001192 3.9e-25 117.9 85 63.5
Thhalv10018712m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 9.6e-24 113.2 86 66.3
AT1G66610 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 2.8e-23 111.7 87 62.1
Carub.0002s1264 Capsella rubella HOM05D000390 ORTHO05D001192 2.8e-23 111.7 86 61.6
BcaC08g46409 Brassica carinata HOM05D000390 ORTHO05D001192 4.8e-23 110.9 85 63.5
BolC6t39417H Brassica oleracea HOM05D000390 ORTHO05D001192 4.8e-23 110.9 85 61.2
BcaB03g14740 Brassica carinata HOM05D000390 ORTHO05D001192 2.4e-22 108.6 85 61.2
Carub.0002s1267 Capsella rubella HOM05D000390 ORTHO05D001192 9.0e-22 106.7 86 62.8
C06p39870 Brassica napus HOM05D000390 ORTHO05D001192 2.0e-21 105.5 88 59.1
Carub.0002s1268 Capsella rubella HOM05D000390 ORTHO05D001192 7.6e-21 103.6 87 60.9
AL2G24600 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.3e-20 102.8 90 54.4
BcaB03g15261 Brassica carinata HOM05D000390 ORTHO05D001192 2.9e-20 101.7 86 58.1
BcaB03g14735 Brassica carinata HOM05D000390 ORTHO05D001192 3.8e-20 101.3 85 58.8
CARHR154710 Cardamine hirsuta HOM05D000390 ORTHO05D001192 6.5e-20 100.5 88 59.1
A07p36020 Brassica napus HOM05D000390 ORTHO05D001192 8.4e-20 100.1 85 60.0
BraA07t31182Z Brassica rapa HOM05D000390 ORTHO05D001192 8.4e-20 100.1 85 60.0
Carub.0002s1265 Capsella rubella HOM05D000390 ORTHO05D001192 1.1e-19 99.8 90 54.4
BcaC08g46410 Brassica carinata HOM05D000390 ORTHO05D001192 1.9e-19 99.0 85 58.8
C06p43410 Brassica napus HOM05D000390 ORTHO05D001192 1.9e-19 99.0 85 58.8
AL2G24580 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 2.7e-18 95.1 86 53.5
Carub.0002s1266 Capsella rubella HOM05D000390 ORTHO05D001192 2.7e-18 95.1 86 58.1
Thhalv10018806m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 3.0e-17 91.7 92 55.4
BcaB03g14739 Brassica carinata HOM05D000390 ORTHO05D001192 4.3e-16 87.8 87 51.7
AT1G66630 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 9.7e-16 86.7 88 52.3
BolC6t39077H Brassica oleracea HOM05D000390 ORTHO05D001192 1.6e-15 85.9 54 72.2
Thhalv10027866m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.2e-15 85.5 90 50.0
A07p33480 Brassica napus HOM05D000390 ORTHO05D001192 4.8e-15 84.3 85 49.4
BraA07t30974Z Brassica rapa HOM05D000390 ORTHO05D001192 4.8e-15 84.3 85 49.4
Thhalv10027864m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 4.8e-15 84.3 93 48.4
AL7G46860 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.1e-14 83.2 87 49.4
Thhalv10027852m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.4e-14 82.0 89 49.4
Carub.0002s1187 Capsella rubella HOM05D000390 ORTHO05D001192 5.9e-13 77.4 85 45.9
AL7G53060 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 7.7e-13 77.0 87 49.4
Thhalv10027865m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.0e-12 76.6 91 47.3
BcaB02g07930 Brassica carinata HOM05D000390 ORTHO05D001192 1.7e-12 75.9 87 48.3
Sp7g05350 Schrenkiella parvula HOM05D000390 ORTHO05D001192 1.7e-12 75.9 87 43.7
AL7G53100 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 5.0e-12 74.3 85 42.4
BcaC02g09616 Brassica carinata HOM05D000390 ORTHO05D001192 6.5e-12 73.9 86 46.5
BolC4t26051H Brassica oleracea HOM05D000390 ORTHO05D001192 6.5e-12 73.9 86 46.5
AT5G37870 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 8.5e-12 73.6 88 47.7
C04p44770 Brassica napus HOM05D000390 ORTHO05D001192 8.5e-12 73.6 86 46.5
Thhalv10028216m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 8.5e-12 73.6 91 44.0
Carub.0007s3309 Capsella rubella HOM05D000390 ORTHO05D001192 1.1e-11 73.2 88 47.7
BcaC08g46408 Brassica carinata HOM05D000390 ORTHO05D001192 1.4e-11 72.8 84 45.2
Carub.0007s3310 Capsella rubella HOM05D000390 ORTHO05D001192 1.9e-11 72.4 88 44.3
AT5G37910 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 2.5e-11 72.0 89 46.1
AL7G46870 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 3.2e-11 71.6 90 43.3
AT5G37890 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 4.2e-11 71.2 87 43.7
Carub.0002s1271 Capsella rubella HOM05D000390 ORTHO05D001192 7.2e-11 70.5 86 43.0
A03p25660 Brassica napus HOM05D000390 ORTHO05D001192 9.4e-11 70.1 96 44.8
A04p15330 Brassica napus HOM05D000390 ORTHO05D001192 9.4e-11 70.1 88 46.6
Carub.0005s1231 Capsella rubella HOM05D000390 ORTHO05D001192 9.4e-11 70.1 86 43.0
AL7G53090 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.2e-10 69.7 86 46.5
AL7G46850 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.6e-10 69.3 89 43.8
BraA04t17174Z Brassica rapa HOM05D000390 ORTHO05D001192 1.6e-10 69.3 88 46.6
Carub.0007s3313 Capsella rubella HOM05D000390 ORTHO05D001192 2.1e-10 68.9 90 43.3
Aa31LG9G17300 Aethionema arabicum HOM05D000390 ORTHO05D001192 2.7e-10 68.6 86 41.9
AT5G37900 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 3.6e-10 68.2 89 44.9
BcaC02g08878 Brassica carinata HOM05D000390 ORTHO05D001192 4.6e-10 67.8 88 45.5
C04p49560 Brassica napus HOM05D000390 ORTHO05D001192 4.6e-10 67.8 88 45.5
BolC4t26543H Brassica oleracea HOM05D000390 ORTHO05D001192 4.6e-10 67.8 88 45.5
CARHR214860 Cardamine hirsuta HOM05D000390 ORTHO05D001192 6.1e-10 67.4 90 44.4
BcaC01g05066 Brassica carinata HOM05D000390 ORTHO05D001192 1.0e-09 66.6 87 42.5
Carub.0007s3314 Capsella rubella HOM05D000390 ORTHO05D001192 1.0e-09 66.6 88 39.8
Sp7g04100 Schrenkiella parvula HOM05D000390 ORTHO05D001192 1.8e-09 65.9 90 44.4
BcaB07g31607 Brassica carinata HOM05D000390 ORTHO05D001192 2.3e-09 65.5 92 42.4
A04p11030 Brassica napus HOM05D000390 ORTHO05D001192 2.3e-09 65.5 77 48.1
Thhalv10028229m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.3e-09 65.5 86 41.9
CARHR214810 Cardamine hirsuta HOM05D000390 ORTHO05D001192 3.0e-09 65.1 86 44.2
BcaB01g04031 Brassica carinata HOM05D000390 ORTHO05D001192 3.9e-09 64.7 84 42.9
BcaB01g03215 Brassica carinata HOM05D000390 ORTHO05D001192 5.1e-09 64.3 63 52.4
Carub.0002s1283 Capsella rubella HOM05D000390 ORTHO05D001192 5.1e-09 64.3 85 42.4
Carub.0007s3308 Capsella rubella HOM05D000390 ORTHO05D001192 6.7e-09 63.9 88 45.5
AL7G46840 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 8.8e-09 63.5 86 44.2
Carub.0002s1284 Capsella rubella HOM05D000390 ORTHO05D001192 8.8e-09 63.5 86 41.9
BcaC08g46046 Brassica carinata HOM05D000390 ORTHO05D001192 1.1e-08 63.2 77 45.5
CARHR214830 Cardamine hirsuta HOM05D000390 ORTHO05D001192 1.1e-08 63.2 86 40.7
A05p14370 Brassica napus HOM05D000390 ORTHO05D001192 1.5e-08 62.8 86 40.7
Carub.0002s0834 Capsella rubella HOM05D000390 ORTHO05D001192 1.5e-08 62.8 90 40.0
A07p20500 Brassica napus HOM05D000390 ORTHO05D001192 1.9e-08 62.4 87 46.0
BraA05t20365Z Brassica rapa HOM05D000390 ORTHO05D001192 1.9e-08 62.4 86 40.7
Thhalv10027819m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.5e-08 62.0 85 41.2
Carub.0006s2403 Capsella rubella HOM05D000390 ORTHO05D001192 4.3e-08 61.2 87 42.5
Carub.0007s3332 Capsella rubella HOM05D000390 ORTHO05D001192 1.3e-07 59.7 86 38.4
CARHR214840 Cardamine hirsuta HOM05D000390 ORTHO05D001192 2.8e-07 58.5 71 42.3
BcaB02g08023 Brassica carinata HOM05D000390 ORTHO05D001192 3.7e-07 58.2 84 36.9
Carub.0008s2352 Capsella rubella HOM05D000390 ORTHO05D001192 6.3e-07 57.4 87 37.9
Thhalv10028270m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.1e-06 56.6 86 38.4
BcaC08g44353 Brassica carinata HOM05D000390 ORTHO05D001192 1.8e-06 55.8 85 36.5
A04p11090 Brassica napus HOM05D000390 ORTHO05D001192 1.8e-06 55.8 89 37.1
C06p17960 Brassica napus HOM05D000390 ORTHO05D001192 1.8e-06 55.8 85 36.5
BolC6t36992H Brassica oleracea HOM05D000390 ORTHO05D001192 1.8e-06 55.8 85 36.5
A07p19520 Brassica napus HOM05D000390 ORTHO05D001192 2.4e-06 55.5 84 36.9
BraA07t29658Z Brassica rapa HOM05D000390 ORTHO05D001192 2.4e-06 55.5 84 36.9
Carub.0002s1278 Capsella rubella HOM05D000390 ORTHO05D001192 2.4e-06 55.5 92 34.8
Carub.0006s2402 Capsella rubella HOM05D000390 ORTHO05D001192 3.1e-06 55.1 91 36.3
Carub.0002s0836 Capsella rubella HOM05D000390 ORTHO05D001192 4.1e-06 54.7 63 50.8
Aa31LG1G18280 Aethionema arabicum HOM05D000390 ORTHO05D001192 5.3e-06 54.3 88 38.6
AL7G46770 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 5.3e-06 54.3 88 36.4
AL8G39760 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 6.9e-06 53.9 86 39.5
BcaB06g27154 Brassica carinata HOM05D000390 ORTHO05D001192 6.9e-06 53.9 89 38.2
Carub.0002s0835 Capsella rubella HOM05D000390 ORTHO05D001192 6.9e-06 53.9 58 48.3
CARHR272990 Cardamine hirsuta HOM05D000390 ORTHO05D001192 9.1e-06 53.5 88 40.9


User provided reference genes

Program Settings