Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR048450 Cardamine hirsuta HOM05D052137 ORTHO05D116304 6.6e-69 263.8 128 100.0
CARHR047960 Cardamine hirsuta HOM05D052137 ORTHO05D116269 3.8e-24 115.2 71 83.1
Carub.0002s0108 Capsella rubella HOM05D000005 ORTHO05D000449 4.7e-14 81.6 96 51.0
CARHR047140 Cardamine hirsuta HOM05D000005 ORTHO05D000449 8.0e-14 80.9 96 51.0
BcaC04g22512 Brassica carinata HOM05D000005 ORTHO05D000449 1.8e-13 79.7 85 52.9
CARHR047230 Cardamine hirsuta HOM05D000005 ORTHO05D000449 5.2e-13 78.2 96 50.0
CARHR047300 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.5e-12 76.6 91 51.6
AT1G63880 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 9.8e-12 73.9 96 47.9
BcaB07g31538 Brassica carinata HOM05D000005 ORTHO05D000449 1.3e-11 73.6 96 47.9
CARHR047090 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.3e-11 73.6 91 49.5
AT1G63860 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.2e-11 72.8 91 48.4
AT1G63870 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.2e-11 72.8 91 48.4
C09p18480 Brassica napus HOM05D000005 ORTHO05D000449 2.2e-11 72.8 98 49.0
BolC9t54743H Brassica oleracea HOM05D000005 ORTHO05D000449 2.2e-11 72.8 98 49.0
Carub.0002s0097 Capsella rubella HOM05D000005 ORTHO05D000449 2.8e-11 72.4 96 47.9
AT2G16870 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 4.8e-11 71.6 97 44.3
CARHR047100 Cardamine hirsuta HOM05D000005 ORTHO05D000449 6.3e-11 71.2 93 47.3
BcaC04g22671 Brassica carinata HOM05D000005 ORTHO05D000449 1.1e-10 70.5 96 46.9
BraA09t37164Z Brassica rapa HOM05D000005 ORTHO05D000449 1.1e-10 70.5 97 46.4
AL2G14410 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.4e-10 70.1 97 47.4
CARHR047120 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.4e-10 70.1 95 45.3
A09p15220 Brassica napus HOM05D000005 ORTHO05D000449 2.4e-10 69.3 98 48.0
Carub.0002s0093 Capsella rubella HOM05D000005 ORTHO05D000449 2.4e-10 69.3 97 47.4
Sp2g00780 Schrenkiella parvula HOM05D000005 ORTHO05D000449 4.1e-10 68.6 96 45.8
C09p16820 Brassica napus HOM05D000005 ORTHO05D000449 5.4e-10 68.2 96 45.8
BolC9t54581H Brassica oleracea HOM05D000005 ORTHO05D000449 5.4e-10 68.2 96 45.8
Carub.0002s0461 Capsella rubella HOM05D000005 ORTHO05D000449 5.4e-10 68.2 96 44.8
CARHR051270 Cardamine hirsuta HOM05D000005 ORTHO05D000449 5.4e-10 68.2 96 42.7
AL2G11240 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 7.0e-10 67.8 97 46.4
Thhalv10000509m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 7.0e-10 67.8 97 42.3
AT5G58120 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 9.1e-10 67.4 96 41.7
Thhalv10000647m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 9.1e-10 67.4 99 46.5
Thhalv10000695m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 9.1e-10 67.4 99 46.5
AL3G49580 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.2e-09 67.0 96 43.8
CARHR047080 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.2e-09 67.0 95 45.3
CARHR051250 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.2e-09 67.0 96 44.8
CARHR051280 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.2e-09 67.0 97 45.4
Sp2g00810 Schrenkiella parvula HOM05D000005 ORTHO05D000449 1.2e-09 67.0 96 43.8
BcaB07g31419 Brassica carinata HOM05D000005 ORTHO05D000449 1.6e-09 66.6 96 44.8
CARHR047210 Cardamine hirsuta HOM05D000005 ORTHO05D000449 2.0e-09 66.2 89 46.1
Carub.0003s3049 Capsella rubella HOM05D000005 ORTHO05D000449 2.7e-09 65.9 98 46.9
Sp2g00800 Schrenkiella parvula HOM05D000005 ORTHO05D000449 2.7e-09 65.9 91 41.8
BraA09t37163Z Brassica rapa HOM05D000005 ORTHO05D000449 3.5e-09 65.5 96 43.8
CARHR047270 Cardamine hirsuta HOM05D000005 ORTHO05D000449 3.5e-09 65.5 93 46.2
Thhalv10023230m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 7.7e-09 64.3 85 47.1
Carub.0002s0526 Capsella rubella HOM05D000005 ORTHO05D000449 1.0e-08 63.9 89 43.8
AL2G11260 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.7e-08 63.2 91 45.1
BraA09t37166Z Brassica rapa HOM05D000005 ORTHO05D000449 1.7e-08 63.2 88 45.5
A09p15210 Brassica napus HOM05D000005 ORTHO05D000449 2.2e-08 62.8 88 45.5
AL1G66260 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 2.9e-08 62.4 96 42.7
Carub.0002s0072 Capsella rubella HOM05D000005 ORTHO05D000449 6.5e-08 61.2 96 39.6
AT1G64070 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 8.5e-08 60.8 96 38.5
C09p18470 Brassica napus HOM05D000005 ORTHO05D000449 8.5e-08 60.8 88 44.3
BolC9t54742H Brassica oleracea HOM05D000005 ORTHO05D000449 8.5e-08 60.8 88 44.3
BcaC04g22513 Brassica carinata HOM05D000005 ORTHO05D000449 1.5e-07 60.1 96 40.6
C09p18400 Brassica napus HOM05D000005 ORTHO05D000449 1.5e-07 60.1 96 40.6
BolC9t54734H Brassica oleracea HOM05D000005 ORTHO05D000449 1.5e-07 60.1 96 40.6
CARHR050870 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.5e-07 60.1 91 40.7
AL2G11205 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 1.9e-07 59.7 96 41.7
Carub.0002s0747 Capsella rubella HOM05D000005 ORTHO05D000449 4.2e-07 58.5 95 40.0
AT1G56520 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 5.5e-07 58.2 96 40.6
BcaC06g31268 Brassica carinata HOM05D000005 ORTHO05D000449 5.5e-07 58.2 96 37.5
Carub.0007s2787 Capsella rubella HOM05D000005 ORTHO05D000449 5.5e-07 58.2 96 38.5
AL1G66330 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 7.2e-07 57.8 96 38.5
AT1G63740 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 7.2e-07 57.8 93 37.6
Sp2g00920 Schrenkiella parvula HOM05D000005 ORTHO05D000449 1.2e-06 57.0 108 38.0
CARHR048060 Cardamine hirsuta HOM05D000005 ORTHO05D000449 1.6e-06 56.6 96 39.6
AT1G56540 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 2.1e-06 56.2 96 38.5
BcaB05g24905 Brassica carinata HOM05D000005 ORTHO05D000449 2.1e-06 56.2 96 40.6
A04p19450 Brassica napus HOM05D000005 ORTHO05D000449 2.1e-06 56.2 96 39.6
Carub.0002s0767 Capsella rubella HOM05D000005 ORTHO05D000449 2.1e-06 56.2 96 40.6
BcaB07g31537 Brassica carinata HOM05D000005 ORTHO05D000449 2.7e-06 55.8 97 37.1
BolC8t51577H Brassica oleracea HOM05D000005 ORTHO05D000449 2.7e-06 55.8 98 36.7
BraA04t17540Z Brassica rapa HOM05D000005 ORTHO05D000449 2.7e-06 55.8 96 39.6
CARHR048000 Cardamine hirsuta HOM05D000005 ORTHO05D000449 2.7e-06 55.8 75 45.3
Thhalv10018052m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 2.7e-06 55.8 97 40.2
BcaC04g22342 Brassica carinata HOM05D000005 ORTHO05D000449 3.6e-06 55.5 96 38.5
BolC9t54941H Brassica oleracea HOM05D000005 ORTHO05D000449 3.6e-06 55.5 96 38.5
CARHR048030 Cardamine hirsuta HOM05D000005 ORTHO05D000449 3.6e-06 55.5 94 40.4
AL7G41850 Arabidopsis lyrata HOM05D000189 ORTHO05D000474 4.7e-06 55.1 87 39.1
BcaB07g32547 Brassica carinata HOM05D000005 ORTHO05D000449 4.7e-06 55.1 97 39.2
Thhalv10023951m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 4.7e-06 55.1 98 36.7
AL1G65640 Arabidopsis lyrata HOM05D000005 ORTHO05D000449 6.1e-06 54.7 96 34.4
CARHR055030 Cardamine hirsuta HOM05D000005 ORTHO05D000449 6.1e-06 54.7 97 40.2
Thhalv10027634m.g Eutrema salsugineum HOM05D000005 ORTHO05D000449 6.1e-06 54.7 96 38.5
AT1G63730 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 8.0e-06 54.3 97 38.1
AT4G14370 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 8.0e-06 54.3 96 37.5
Carub.0002s0109 Capsella rubella HOM05D000005 ORTHO05D000449 8.0e-06 54.3 97 38.1
Carub.0002s0748 Capsella rubella HOM05D000005 ORTHO05D000449 8.0e-06 54.3 96 37.5


User provided reference genes

Program Settings