Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR022900 Cardamine hirsuta HOM05D000307 ORTHO05D000166 9.2e-42 173.3 100 100.0
CARHR022960 Cardamine hirsuta HOM05D000307 ORTHO05D000166 3.1e-21 105.1 95 61.1
CARHR182360 Cardamine hirsuta HOM05D000307 ORTHO05D000166 2.9e-19 98.6 95 68.4
AL1G36120 Arabidopsis lyrata HOM05D000307 ORTHO05D000166 5.6e-15 84.3 95 50.5
AT1G22590 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 5.6e-15 84.3 95 51.6
CARHR182150 Cardamine hirsuta HOM05D000307 ORTHO05D000166 9.6e-15 83.6 68 63.2
Carub.0007s2949 Capsella rubella HOM05D000307 ORTHO05D000166 1.1e-13 80.1 95 47.4
Carub.0001s2210 Capsella rubella HOM05D000307 ORTHO05D000166 1.8e-13 79.3 95 54.7
Carub.0002s1053 Capsella rubella HOM05D000307 ORTHO05D000166 2.6e-12 75.5 95 45.3
Carub.0002s1051 Capsella rubella HOM05D000307 ORTHO05D000166 2.9e-11 72.0 95 44.2
Carub.0002s1041 Capsella rubella HOM05D000307 ORTHO05D000166 3.8e-11 71.6 91 44.0
Thhalv10008961m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 3.8e-11 71.6 99 43.4
Sp1g20080 Schrenkiella parvula HOM05D000307 ORTHO05D000166 3.5e-09 65.1 99 38.4
BcaC05g26188 Brassica carinata HOM05D000307 ORTHO05D000166 8.7e-08 60.5 95 38.9
A09p42170 Brassica napus HOM05D000307 ORTHO05D000166 8.7e-08 60.5 95 38.9
C05p21730 Brassica napus HOM05D000307 ORTHO05D000166 8.7e-08 60.5 95 38.9
BolC5t30867H Brassica oleracea HOM05D000307 ORTHO05D000166 8.7e-08 60.5 95 38.9
BraA09t39703Z Brassica rapa HOM05D000307 ORTHO05D000166 8.7e-08 60.5 95 38.9
BcaB07g32269 Brassica carinata HOM05D000307 ORTHO05D000166 1.1e-07 60.1 95 38.9
BcaB03g14196 Brassica carinata HOM05D000307 ORTHO05D000166 2.1e-06 55.8 99 35.4
CARHR258050 Cardamine hirsuta HOM05D000307 ORTHO05D000166 2.1e-06 55.8 33 81.8
Aa31LG7G6470 Aethionema arabicum HOM05D000307 ORTHO05D000166 3.7e-06 55.1 72 38.9
A07p14300 Brassica napus HOM05D000307 ORTHO05D000166 4.8e-06 54.7 99 36.4
BraA07t29187Z Brassica rapa HOM05D000307 ORTHO05D000166 4.8e-06 54.7 99 36.4


User provided reference genes

Program Settings