Gene: Carub.0007s2949
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s2949
- Transcript Identifier Carub.0007s2949.1
- Gene Type Coding gene
- Location scaffold_7 : 11466033-11467973 : positive
Gene Family Information
- ID HOM05D000307
- #Genes/#Species 1483/93
- Phylogenetic origin
- ID ORTHO05D000166
- #Genes/#Species 1551/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Carub.0007s2949.v1.1
- pacid 39234939
- synonym Carubv10006189m.g
Descriptions
- Description PTHR11945:SF158 - MADS-BOX PROTEIN AGL87
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G22590 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000981 | IEA | InterPro | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000987 | IEA | InterPro | cis-regulatory region sequence-specific DNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |