Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 9.7e-286 986.1 491 100.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.2e-259 899.4 463 95.5
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.6e-259 899.0 466 95.1
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.5e-259 897.5 483 92.1
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 2.9e-258 894.8 464 95.7
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 2.9e-258 894.8 463 95.0
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 4.3e-257 891.0 463 94.8
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 5.6e-257 890.6 464 95.3
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.6e-256 889.0 464 94.8
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-250 869.4 463 93.1
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.5e-249 865.1 440 95.7
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 6.0e-243 844.0 463 88.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 7.8e-227 790.4 465 81.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.9e-226 788.1 466 81.8
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 5.1e-226 787.7 455 82.9
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.1e-225 786.6 459 82.4
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.1e-225 786.6 460 83.9
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.5e-225 786.2 473 80.5
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 5.6e-225 784.3 466 81.5
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.1e-224 782.3 457 82.7
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 2.8e-224 781.9 457 80.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 3.6e-224 781.6 462 80.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 6.2e-224 780.8 458 81.7
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.1e-223 780.0 467 81.6
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.1e-223 780.0 460 81.1
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.4e-223 779.6 425 85.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.8e-223 779.2 462 80.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.1e-223 778.5 439 82.7
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 3.1e-223 778.5 460 81.7
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.0e-223 778.1 462 81.4
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 5.3e-223 777.7 457 82.1
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 6.9e-223 777.3 455 81.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 6.9e-223 777.3 464 81.2
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.5e-222 776.2 462 81.4
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.5e-222 776.2 429 85.3
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.0e-222 775.8 456 81.8
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.6e-222 775.4 463 81.2
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 2.6e-222 775.4 436 83.7
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.6e-222 775.4 457 81.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 3.4e-222 775.0 462 81.2
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.4e-222 775.0 433 83.6
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 7.6e-222 773.9 460 82.6
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 9.9e-222 773.5 431 83.5
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 3.8e-221 771.5 439 83.6
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 4.9e-221 771.2 457 81.2
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.9e-220 769.2 467 79.7
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.9e-220 769.2 433 83.4
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.4e-220 768.8 437 82.4
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 2.4e-220 768.8 465 80.0
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 3.2e-220 768.5 462 79.9
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 3.2e-220 768.5 462 80.7
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 9.3e-220 766.9 460 80.4
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-219 766.5 427 84.5
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.2e-219 766.5 456 79.4
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.2e-219 766.5 434 82.5
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 3.5e-219 765.0 427 83.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.6e-219 764.6 429 83.7
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 6.0e-219 764.2 430 82.6
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.0e-218 763.5 443 81.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.7e-218 762.7 433 83.8
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.3e-218 762.3 434 82.0
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 2.3e-218 762.3 430 83.7
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.6e-218 760.8 428 84.6
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.1e-217 760.0 466 80.3
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 4.3e-217 758.1 466 79.0
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.6e-216 755.0 464 78.4
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 6.2e-216 754.2 452 80.1
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.0e-214 749.2 415 83.9
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 3.2e-212 741.9 423 81.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 4.2e-212 741.5 423 81.1
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.1e-211 739.2 466 76.0
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 6.0e-211 737.6 454 77.8
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 3.0e-210 735.3 476 74.4
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 4.8e-208 728.0 450 77.8
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 8.1e-208 727.2 434 80.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 2.0e-206 722.6 427 79.2
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 4.5e-206 721.5 461 75.7
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.9e-205 718.8 429 78.3
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 6.4e-205 717.6 401 84.0
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 1.1e-204 716.8 401 84.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.7e-203 712.2 418 79.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 3.0e-202 708.8 425 79.1
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 8.7e-202 707.2 426 76.8
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.9e-201 706.1 387 89.7
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 3.3e-201 705.3 425 76.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.1e-200 702.6 478 73.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 6.2e-200 701.0 489 71.2
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.1e-195 686.0 428 76.2
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.0e-194 682.2 442 74.4
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.5e-193 679.9 382 84.3
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 8.2e-192 674.1 399 82.0
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.4e-191 673.3 492 68.9
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.1e-187 659.4 394 79.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 3.9e-186 655.2 457 70.2
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 8.8e-186 654.1 567 61.6
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.8e-178 629.8 421 70.1
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.2e-176 622.9 357 82.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.2e-173 612.8 438 69.6
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 7.0e-167 591.3 435 64.1
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 3.8e-165 585.5 426 65.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.1e-163 579.7 377 76.1
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 3.0e-154 549.3 499 60.1
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 5.8e-137 491.9 271 85.2
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 9.8e-137 491.1 272 84.2
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 3.7e-136 489.2 374 61.5
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 7.0e-135 485.0 272 84.2
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.0e-133 479.6 462 55.4
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.4e-114 416.8 272 75.0
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 9.1e-66 255.4 147 80.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 8.8e-61 238.8 190 64.2
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.0e-57 227.6 147 72.1
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.2e-39 166.0 102 72.5
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.2e-28 132.1 79 75.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 8.6e-24 115.9 84 66.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 8.3e-19 99.4 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 6.6e-16 89.7 49 87.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 9.8e-12 75.9 49 69.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-11 75.5 42 78.6
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 8.3e-11 72.8 42 73.8
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.9e-07 61.6 40 72.5


User provided reference genes

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