Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0736 Cannabis sativa HOM05D000916 ORTHO05D009274 1.4e-81 306.2 158 100.0
FAN03G2260 Fragaria x ananassa HOM05D000916 ORTHO05D009274 2.0e-38 162.9 168 58.3
FvH4_7g01930 Fragaria vesca HOM05D000916 ORTHO05D009274 2.6e-38 162.5 159 58.5
FAN06G1234 Fragaria x ananassa HOM05D000916 ORTHO05D009274 2.6e-38 162.5 159 58.5
RcHm_v2.0_Chr1g0318771 Rosa chinensis HOM05D000916 ORTHO05D009274 2.6e-38 162.5 161 60.2
Prupe.2G025000 Prunus persica HOM05D000916 ORTHO05D009274 4.4e-38 161.8 155 62.6
FAN03G1280 Fragaria x ananassa HOM05D000916 ORTHO05D009274 5.7e-38 161.4 157 59.2
COL.COLO4_12325 Corchorus olitorius HOM05D000916 ORTHO05D003833 1.7e-37 159.8 153 62.1
CiPaw.14G004300 Carya illinoinensis HOM05D000916 ORTHO05D009274 3.7e-37 158.7 119 65.5
AUR62023107 Chenopodium quinoa HOM05D000916 ORTHO05D009274 4.9e-37 158.3 152 59.9
Lj9P642T24 Lonicera japonica HOM05D000916 ORTHO05D009274 8.3e-37 157.5 110 70.0
CsaV3_3G031830 Cucumis sativus L. HOM05D000916 ORTHO05D009274 2.4e-36 156.0 155 58.7
Aqoxy2G00212 Aquilegia oxysepala HOM05D000916 ORTHO05D009274 4.1e-36 155.2 149 59.1
Gorai.004G067400 Gossypium raimondii HOM05D000916 ORTHO05D009274 5.4e-36 154.8 126 64.3
Atru.chr11.2553 Acer truncatum HOM05D000916 ORTHO05D009274 1.2e-35 153.7 163 58.9
Potri.001G260600 Populus trichocarpa HOM05D000916 ORTHO05D009274 1.2e-35 153.7 110 71.8
GSVIVG01001443001 Vitis vinifera HOM05D000916 ORTHO05D009274 1.2e-35 153.7 110 68.2
Manes.07G012200 Manihot esculenta HOM05D000916 ORTHO05D009274 1.6e-35 153.3 161 58.4
TAR636G3509 Trochodendron aralioides HOM05D000916 ORTHO05D009274 1.6e-35 153.3 154 55.2
Dinv07424 Davidia involucrata HOM05D000916 ORTHO05D009274 2.7e-35 152.5 160 55.0
Nn2g15166 Nelumbo nucifera HOM05D000916 ORTHO05D009274 3.5e-35 152.1 155 56.8
Oeu049471.1 Olea europaea HOM05D000916 ORTHO05D009274 4.5e-35 151.8 168 52.4
Ciclev10032919m.g Citrus clementina HOM05D000916 ORTHO05D009274 5.9e-35 151.4 112 67.0
Psat0s488g0040 Pisum sativum HOM05D000916 ORTHO05D009274 7.7e-35 151.0 152 55.9
TAR636G0367 Trochodendron aralioides HOM05D000916 ORTHO05D009274 7.7e-35 151.0 137 57.7
Gohir.D08G065100 Gossypium hirsutum HOM05D000916 ORTHO05D009274 1.0e-34 150.6 126 61.9
Migut.N01806 Erythranthe guttata HOM05D000916 ORTHO05D009274 1.3e-34 150.2 145 60.0
Potri.001G259216 Populus trichocarpa HOM05D000916 ORTHO05D009274 1.3e-34 150.2 163 55.2
Potri.001G259900 Populus trichocarpa HOM05D000916 ORTHO05D009274 1.3e-34 150.2 163 55.2
Rhsim07G0060800 Rhododendron simsii HOM05D000916 ORTHO05D009274 1.3e-34 150.2 151 57.6
arahy.Tifrunner.gnm1.ann1.W0KZJE Arachis hypogaea HOM05D000916 ORTHO05D009274 1.7e-34 149.8 141 61.7
Medtr0003s0480 Medicago truncatula HOM05D000916 ORTHO05D009274 1.7e-34 149.8 156 55.8
Cpa.g.sc197.27 Carica papaya HOM05D000916 ORTHO05D009274 2.3e-34 149.4 159 55.3
Lsat_1_v5_gn_7_34400 Lactuca sativa HOM05D000916 ORTHO05D009274 2.3e-34 149.4 158 55.1
Actinidia06285 Actinidia chinensis HOM05D000916 ORTHO05D009274 2.9e-34 149.1 162 54.3
CSS0046245 Camellia sinensis var. sinensis HOM05D000916 ORTHO05D009274 2.9e-34 149.1 110 68.2
Rhsim07G0060200 Rhododendron simsii HOM05D000916 ORTHO05D009274 5.0e-34 148.3 107 69.2
DCAR_022368 Daucus carota HOM05D000916 ORTHO05D009274 6.6e-34 147.9 154 53.2
ClCG10G012070 Citrullus lanatus HOM05D000916 ORTHO05D009274 1.1e-33 147.1 154 54.5
PSO170G4961 Papaver somniferum HOM05D000916 ORTHO05D009274 1.1e-33 147.1 143 60.8
Sed0025824 Sechium edule HOM05D000916 ORTHO05D009274 1.1e-33 147.1 139 61.2
Solyc01g088030.4 Solanum lycopersicum HOM05D000916 ORTHO05D009274 1.1e-33 147.1 149 58.4
Cc04_g14680 Coffea canephora HOM05D000916 ORTHO05D009274 1.5e-33 146.7 159 55.3
Sopen01g034920 Solanum pennellii HOM05D000916 ORTHO05D009274 1.9e-33 146.4 156 55.1
A02p27690 Brassica napus HOM05D000916 ORTHO05D009274 2.5e-33 146.0 151 58.3
BraA02t07808Z Brassica rapa HOM05D000916 ORTHO05D009274 2.5e-33 146.0 151 58.3
Eucgr.G03277 Eucalyptus grandis HOM05D000916 ORTHO05D009274 3.3e-33 145.6 122 63.1
TWI53G0499 Tripterygium wilfordii HOM05D000916 ORTHO05D009274 3.3e-33 145.6 161 54.0
EL10Ac2g04385 Beta vulgaris HOM05D000916 ORTHO05D009274 4.3e-33 145.2 155 54.8
HanXRQChr15g0480451 Helianthus annuus HOM05D000916 ORTHO05D009274 4.3e-33 145.2 149 55.0
MELO3C024009.2 Cucumis melo HOM05D000916 ORTHO05D009274 5.6e-33 144.8 146 58.9
TAR636G0653 Trochodendron aralioides HOM05D000916 ORTHO05D009274 7.3e-33 144.4 123 61.8
CAN.G410.4 Capsicum annuum HOM05D000916 ORTHO05D009274 9.5e-33 144.1 140 57.9
Glyma.09G226100 Glycine max HOM05D000916 ORTHO05D009274 9.5e-33 144.1 161 55.3
Nitab4.5_0002888g0050 Nicotiana tabacum HOM05D000916 ORTHO05D009274 9.5e-33 144.1 136 58.8
Phvul.011G013300 Phaseolus vulgaris HOM05D000916 ORTHO05D009274 9.5e-33 144.1 150 56.7
Carub.0008s0547 Capsella rubella HOM05D000916 ORTHO05D009274 1.2e-32 143.7 157 54.8
Lj3g0014758 Lotus japonicus HOM05D000916 ORTHO05D009274 2.1e-32 142.9 135 60.0
THA.LOC104826696 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.1e-32 142.9 134 60.4
THA.LOC104826705 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.1e-32 142.9 134 60.4
THA.LOC104827433 Tarenaya hassleriana HOM05D000916 ORTHO05D009274 2.1e-32 142.9 134 60.4
PGSC0003DMG400006832 Solanum tuberosum HOM05D000916 ORTHO05D009274 2.8e-32 142.5 146 56.2
VMungo1127G0561 Vigna mungo HOM05D000916 ORTHO05D009274 2.8e-32 142.5 154 55.2
PSO210G2598 Papaver somniferum HOM05D000916 ORTHO05D009274 3.6e-32 142.1 144 58.3
Peaxi162Scf01108g00212 Petunia axillaris HOM05D000916 ORTHO05D009274 3.6e-32 142.1 140 57.9
PGR031G2328 Punica granatum HOM05D000916 ORTHO05D009274 4.7e-32 141.7 159 51.6
Potri.001G260300 Populus trichocarpa HOM05D000916 ORTHO05D009274 8.0e-32 141.0 98 70.4
Sp2g08020 Schrenkiella parvula HOM05D000916 ORTHO05D009274 1.0e-31 140.6 154 55.8
Thhalv10003279m.g Eutrema salsugineum HOM05D000916 ORTHO05D009274 2.3e-31 139.4 130 57.7
MSTRG.5047 Avicennia marina HOM05D000916 ORTHO05D009274 5.2e-31 138.3 172 51.2
Hma1.2p1_0579F.1_g182540 Hydrangea macrophylla HOM05D000916 ORTHO05D009274 1.2e-30 137.1 83 74.7
vmacro13705 Vaccinium macrocarpon HOM05D000916 ORTHO05D009274 1.2e-30 137.1 165 50.9
AT5G43210 Arabidopsis thaliana HOM05D000916 ORTHO05D009274 1.5e-30 136.7 164 50.6
BcaB07g30592 Brassica carinata HOM05D000916 ORTHO05D009274 2.0e-30 136.3 155 52.9
Aa31LG9G13290 Aethionema arabicum HOM05D000916 ORTHO05D009274 3.4e-30 135.6 159 52.8
SGA_v2.0_scaffold5G02941 Striga asiatica HOM05D000916 ORTHO05D009274 1.7e-29 133.3 194 44.3
Sc11g0009010 Simmondsia chinensis HOM05D000916 ORTHO05D009274 6.4e-29 131.3 149 52.3
ATR0782G182 Amborella trichopoda HOM05D000916 ORTHO05D009274 2.0e-27 126.3 157 49.7
RcHm_v2.0_Chr1g0318641 Rosa chinensis HOM05D000916 ORTHO05D009274 2.7e-27 125.9 118 61.9
MBI11_g21817_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D009274 3.0e-26 122.5 110 60.0
FAN01G3008 Fragaria x ananassa HOM05D000916 ORTHO05D009274 6.6e-26 121.3 110 61.8
AUR62009428 Chenopodium quinoa HOM05D000916 ORTHO05D009274 1.6e-24 116.7 89 66.3
Os11g0146550 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 1.6e-24 116.7 126 55.6
CDE11G0804 Ceratophyllum demersum HOM05D000916 ORTHO05D009274 2.8e-24 115.9 111 57.7
Zm00001eb405020 Zea mays HOM05D000916 ORTHO05D009274 2.8e-24 115.9 107 58.9
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 1.4e-23 113.6 136 50.7
Cfa010832 Carpinus fangiana HOM05D000916 ORTHO05D009274 3.1e-23 112.5 91 64.8
MD02G1299300 Malus domestica HOM05D000916 ORTHO05D009274 9.8e-22 107.5 84 64.3
Gohir.A08G055800 Gossypium hirsutum HOM05D000916 ORTHO05D009274 1.7e-21 106.7 84 61.9
Duzib133G0774 Durio zibethinus HOM05D000916 ORTHO05D009274 2.9e-21 105.9 147 47.6
Sabra16G0159300 Salix brachista HOM05D000916 ORTHO05D009274 8.3e-21 104.4 84 64.3
AL8G17370 Arabidopsis lyrata HOM05D000916 ORTHO05D009274 4.1e-20 102.1 104 54.8
Ah.16g100710 Amaranthus hybridus HOM05D000916 ORTHO05D009274 4.6e-19 98.6 144 47.2
Lalb_Chr03g0024151 Lupinus albus HOM05D000916 ORTHO05D009274 6.0e-19 98.2 86 55.8
Mapoly0059s0058 Marchantia polymorpha HOM05D000916 ORTHO05D009274 1.1e-15 87.4 76 52.6
Os12g0143300 Oryza sativa ssp. japonica HOM05D000916 ORTHO05D009274 1.8e-15 86.7 75 60.0
Atru.chr11.2549 Acer truncatum HOM05D000916 ORTHO05D009274 2.3e-15 86.3 52 73.1
Haze_03122 Corylus avellana HOM05D000916 ORTHO05D009274 3.1e-15 85.9 93 54.8
AagrBONN_evm.TU.Sc2ySwM_117.2289 Anthoceros agrestis HOM05D000916 ORTHO05D009274 2.9e-13 79.3 98 41.8
AagrBONN_evm.TU.Sc2ySwM_117.2287 Anthoceros agrestis HOM05D000916 ORTHO05D009274 6.6e-10 68.2 78 44.9
Nitab4.5_0006695g0040 Nicotiana tabacum HOM05D000916 ORTHO05D009274 2.1e-08 63.2 128 37.5
CBR_g31178 Chara braunii HOM05D002376 ORTHO05D004654 6.2e-08 61.6 56 50.0
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 2.3e-07 59.7 72 41.7
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 5.2e-07 58.5 82 40.2
PRCOL_00003986 Prasinoderma coloniale HOM05D000916 ORTHO05D009274 8.9e-07 57.8 88 40.9
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 1.2e-06 57.4 72 41.7
PGR119G0696 Punica granatum HOM05D002376 ORTHO05D004654 2.0e-06 56.6 72 40.3
SMO364G0016 Selaginella moellendorffii HOM05D002376 ORTHO05D004654 2.0e-06 56.6 72 38.9
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 2.0e-06 56.6 82 40.2
Cre07.g351500 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D004654 2.6e-06 56.2 75 40.0
Medtr3g466410 Medicago truncatula HOM05D002376 ORTHO05D004654 2.6e-06 56.2 119 32.8
Cfa023829 Carpinus fangiana HOM05D002376 ORTHO05D004654 3.4e-06 55.8 76 42.1
PRCOL_00000864 Prasinoderma coloniale HOM05D002376 ORTHO05D004654 3.4e-06 55.8 57 45.6
Zm00001eb303730 Zea mays HOM05D002376 ORTHO05D004654 3.4e-06 55.8 67 41.8
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 4.4e-06 55.5 75 40.0
Aa31LG5G6350 Aethionema arabicum HOM05D002376 ORTHO05D004654 5.8e-06 55.1 72 40.3
EL10Ac7g15858 Beta vulgaris HOM05D002376 ORTHO05D004654 5.8e-06 55.1 100 37.0
CDE04G2750 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 5.8e-06 55.1 72 38.9
Psat5g150440 Pisum sativum HOM05D002376 ORTHO05D004654 5.8e-06 55.1 72 40.3
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 7.6e-06 54.7 72 41.7
Lalb_Chr15g0085961 Lupinus albus HOM05D002376 ORTHO05D004654 7.6e-06 54.7 86 37.2
Lalb_Chr20g0117351 Lupinus albus HOM05D002376 ORTHO05D004654 7.6e-06 54.7 116 33.6
Oeu011367.1 Olea europaea HOM05D002376 ORTHO05D004654 7.6e-06 54.7 72 40.3
Rhsim01G0242200 Rhododendron simsii HOM05D002376 ORTHO05D004654 7.6e-06 54.7 72 40.3
vmacro14632 Vaccinium macrocarpon HOM05D002376 ORTHO05D004654 7.6e-06 54.7 72 40.3
Aqoxy2G00736 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 9.9e-06 54.3 72 41.7
CANSAT54G2949 Cannabis sativa HOM05D002376 ORTHO05D004654 9.9e-06 54.3 82 37.8
Ca_15029_v3 Cicer arietinum L. HOM05D002376 ORTHO05D004654 9.9e-06 54.3 72 40.3
MD02G1299100 Malus domestica HOM05D000916 ORTHO05D009274 9.9e-06 54.3 38 71.1
Mapoly0004s0007 Marchantia polymorpha HOM05D002376 ORTHO05D004654 9.9e-06 54.3 69 40.6
Sc12g0000140 Simmondsia chinensis HOM05D002376 ORTHO05D004654 9.9e-06 54.3 72 38.9


User provided reference genes

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