Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 4.8e-307 1057.0 529 100.0
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 3.2e-234 815.1 530 76.0
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 2.3e-232 808.9 530 76.2
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 2.5e-231 805.4 530 75.7
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 9.6e-231 803.5 530 75.5
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 1.6e-230 802.7 530 75.1
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 2.4e-229 798.9 531 73.6
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 1.9e-226 789.3 530 75.5
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 7.1e-226 787.3 532 75.8
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 2.3e-224 782.3 531 75.5
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 1.5e-223 779.6 531 74.4
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 3.3e-223 778.5 531 75.3
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 4.3e-223 778.1 536 72.9
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 9.0e-221 770.4 530 73.0
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 3.4e-220 768.5 530 74.2
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 1.0e-219 766.9 529 73.2
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 2.9e-219 765.4 530 74.2
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.5e-218 762.3 530 72.5
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 3.2e-218 761.9 529 73.2
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 5.5e-218 761.1 530 73.8
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 9.3e-218 760.4 530 71.7
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 8.7e-216 753.8 530 71.9
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 1.1e-215 753.4 527 71.3
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 3.3e-215 751.9 531 72.5
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 4.3e-215 751.5 530 72.1
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 2.2e-214 749.2 530 71.5
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 2.8e-214 748.8 531 71.0
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 3.1e-213 745.3 530 70.8
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 4.5e-212 741.5 529 70.1
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 3.8e-211 738.4 528 70.5
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 8.5e-211 737.3 532 70.5
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 2.1e-209 732.6 536 69.2
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.4e-208 729.9 529 70.1
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 1.4e-208 729.9 530 71.3
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.4e-208 729.9 530 70.2
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 2.3e-208 729.2 520 70.6
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 3.9e-208 728.4 530 69.8
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 6.7e-208 727.6 526 69.8
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 4.4e-207 724.9 520 72.3
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 1.3e-206 723.4 531 69.3
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 8.2e-206 720.7 530 69.2
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 8.2e-206 720.7 529 68.8
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 2.4e-205 719.2 530 69.2
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 5.3e-205 718.0 534 70.6
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 2.0e-204 716.1 531 69.9
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 3.4e-204 715.3 531 69.7
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 2.9e-203 712.2 585 63.4
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 5.5e-202 708.0 573 64.7
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 5.5e-202 708.0 527 69.1
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 5.5e-202 708.0 527 69.1
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 2.1e-201 706.1 529 67.9
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 2.7e-201 705.7 535 68.2
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 2.7e-201 705.7 541 66.2
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 1.4e-200 703.4 527 67.9
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 1.1e-199 700.3 521 68.9
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 4.8e-198 694.9 520 68.8
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 6.3e-198 694.5 530 67.7
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 2.4e-197 692.6 520 68.7
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 5.3e-197 691.4 531 67.4
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 5.3e-197 691.4 532 67.1
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 9.1e-197 690.6 527 66.4
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.5e-196 688.7 527 66.0
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 2.9e-195 685.6 518 68.0
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 8.5e-195 684.1 519 66.9
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 9.4e-194 680.6 529 64.7
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 9.4e-194 680.6 530 64.5
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 6.7e-192 674.5 537 66.5
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 2.0e-191 672.9 520 65.2
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 2.6e-191 672.5 520 65.4
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 2.6e-191 672.5 529 66.7
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 5.7e-191 671.4 536 66.2
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 5.7e-191 671.4 530 66.6
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 7.5e-191 671.0 530 66.4
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 7.5e-191 671.0 529 66.5
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 9.7e-191 670.6 529 66.5
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.1e-189 667.2 530 66.4
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 1.4e-189 666.8 562 63.2
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 1.6e-188 663.3 482 70.1
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.0e-187 660.6 501 67.7
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.7e-187 659.8 520 65.0
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 6.5e-187 657.9 530 64.9
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 1.9e-186 656.4 530 65.8
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 5.5e-186 654.8 530 65.3
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 3.6e-185 652.1 520 65.4
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 1.0e-184 650.6 519 65.7
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 5.2e-184 648.3 526 63.1
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 8.8e-184 647.5 523 64.6
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 3.4e-183 645.6 529 64.5
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 2.8e-182 642.5 550 62.0
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 6.3e-182 641.3 523 64.4
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 6.3e-182 641.3 525 62.5
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 1.1e-181 640.6 521 63.7
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.8e-181 639.8 529 62.6
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 9.1e-181 637.5 521 63.5
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 3.5e-180 635.6 535 63.4
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 1.0e-179 634.0 529 61.6
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 1.7e-179 633.3 531 62.5
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 1.6e-177 626.7 524 63.2
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 5.2e-176 621.7 539 61.6
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 6.8e-176 621.3 444 69.8
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 1.8e-173 613.2 530 59.8
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 7.0e-173 611.3 447 69.6
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 8.6e-171 604.4 443 68.6
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 8.0e-169 597.8 532 58.1
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 2.0e-167 593.2 527 59.6
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 1.7e-166 590.1 521 60.8
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 4.9e-166 588.6 529 58.4
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 3.7e-158 562.4 460 65.0
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 4.3e-154 548.9 512 57.4
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 1.4e-141 507.3 352 71.9
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 9.9e-135 484.6 466 57.5
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 1.1e-125 454.5 535 47.9
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 9.3e-125 451.4 542 48.7
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 1.6e-124 450.7 394 58.1
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 8.1e-121 438.3 403 58.1
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 1.0e-110 404.8 516 43.2
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 4.3e-98 362.8 479 44.7
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 1.9e-93 347.4 494 42.1
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 1.2e-60 238.4 139 82.7
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 1.0e-51 208.8 449 36.1
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 8.3e-41 172.6 127 68.5
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 2.2e-33 147.9 274 38.3
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 6.0e-31 139.8 149 57.0
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.8e-27 128.3 79 75.9
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 1.7e-25 121.7 76 75.0
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 3.2e-24 117.5 73 76.7
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 6.0e-23 113.2 72 76.4
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 1.7e-22 111.7 104 61.5
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 3.0e-22 110.9 143 40.6
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 4.3e-21 107.1 61 80.3
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 8.4e-17 92.8 247 30.4
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-10 72.0 53 54.7
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 9.3e-08 62.8 72 50.0
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 1.0e-06 59.3 42 71.4


User provided reference genes

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