Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.9e-271 937.9 461 100.0
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.3e-236 822.8 460 87.4
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 3.3e-235 818.1 456 86.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.3e-234 816.2 455 85.5
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.8e-234 815.1 441 87.1
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.5e-232 809.3 463 85.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 3.4e-232 808.1 447 86.4
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 4.4e-232 807.7 459 85.6
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 2.2e-231 805.4 446 86.1
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.9e-231 805.1 449 86.4
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 2.9e-231 805.1 446 85.7
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.8e-231 804.7 466 85.8
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 4.9e-231 804.3 450 86.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 6.4e-231 803.9 460 85.0
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 8.4e-231 803.5 455 84.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 5.4e-230 800.8 456 84.4
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.6e-229 799.3 454 85.7
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.1e-229 798.9 455 84.8
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.1e-229 798.9 450 85.3
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.5e-229 798.1 459 84.5
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 6.0e-229 797.3 455 85.5
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 7.9e-229 797.0 458 85.6
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.0e-228 796.6 455 84.2
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.7e-228 795.8 454 84.8
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.7e-228 795.8 461 83.9
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.0e-228 795.0 463 83.8
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 5.1e-228 794.3 454 85.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.6e-228 793.9 461 84.8
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 8.7e-228 793.5 452 85.0
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 8.7e-228 793.5 447 85.2
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.1e-227 793.1 461 84.2
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.1e-227 793.1 462 84.6
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.9e-227 792.3 458 83.6
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 7.3e-227 790.4 425 88.0
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.3e-227 790.4 426 88.5
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 9.6e-227 790.0 448 84.6
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.6e-226 789.3 424 88.4
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.6e-226 788.1 456 82.7
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.8e-226 787.7 432 87.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 6.2e-226 787.3 447 83.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 8.1e-226 786.9 460 83.5
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 4.0e-225 784.6 453 83.9
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 6.9e-225 783.9 423 87.5
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 2.6e-224 781.9 448 82.4
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.6e-224 781.9 454 83.5
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.4e-224 781.6 455 83.3
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 5.8e-224 780.8 456 82.5
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 2.2e-223 778.9 452 82.7
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 2.9e-223 778.5 426 85.7
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 3.8e-223 778.1 473 81.4
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.8e-223 778.1 424 87.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 3.8e-223 778.1 426 85.9
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 6.4e-223 777.3 462 81.2
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 8.4e-223 776.9 454 82.6
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.1e-222 776.5 446 83.2
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.9e-222 775.8 459 82.1
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.9e-222 775.8 453 81.9
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 7.1e-222 773.9 449 82.9
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 9.3e-222 773.5 448 81.9
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 9.3e-222 773.5 456 81.8
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.6e-221 772.7 449 82.4
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.7e-221 771.9 483 78.7
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.7e-221 771.9 446 82.5
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.0e-220 770.0 460 81.3
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.3e-220 769.6 425 84.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 3.0e-220 768.5 461 80.3
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.1e-219 766.5 462 80.1
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.6e-218 762.7 459 80.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 8.1e-218 760.4 478 77.8
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 3.1e-217 758.4 415 85.5
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.5e-216 756.1 418 84.4
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-214 749.6 455 79.1
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 5.5e-214 747.7 483 77.2
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 2.7e-213 745.3 455 78.5
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 2.7e-213 745.3 424 82.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.5e-211 739.6 440 81.8
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 9.0e-209 730.3 398 87.2
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 2.0e-208 729.2 423 82.3
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.7e-207 726.1 422 80.1
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 6.5e-207 724.2 437 78.5
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 7.2e-206 720.7 425 78.4
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.6e-205 719.5 398 84.7
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.6e-205 718.0 472 76.1
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 7.9e-205 717.2 445 76.4
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.3e-204 716.5 489 73.6
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.0e-200 702.6 401 86.3
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.6e-200 702.2 465 72.9
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.8e-199 698.4 447 77.4
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.1e-198 696.8 380 87.9
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-198 696.4 439 76.5
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.6e-197 693.0 491 72.3
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.2e-192 676.8 555 64.1
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 8.5e-191 670.6 391 81.8
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 2.3e-188 662.5 385 82.6
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 2.6e-187 659.1 450 73.1
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.0e-183 647.1 446 68.8
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.7e-183 646.4 354 86.2
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.7e-178 628.6 425 74.1
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 8.3e-170 600.9 424 66.5
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.0e-168 596.3 424 67.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.6e-165 586.6 375 76.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.7e-160 569.3 500 62.4
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 7.3e-142 508.1 265 90.6
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 8.1e-141 504.6 306 82.4
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.0e-139 500.0 292 82.9
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.1e-137 494.2 456 58.8
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.9e-134 483.4 374 61.5
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.8e-116 423.7 249 83.9
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.1e-65 255.0 145 82.1
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.8e-61 240.4 187 66.3
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-59 235.0 143 75.5
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 5.6e-41 172.9 92 84.8
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.3e-26 125.2 79 70.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 2.8e-24 117.5 70 80.0
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 3.5e-19 100.5 57 78.9
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 4.3e-17 93.6 49 89.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.7e-11 74.3 49 69.4
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.7e-11 74.3 42 78.6
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.1e-07 62.4 40 75.0


User provided reference genes

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