Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 0.0e+00 1271.5 634 100.0
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 9.9e-299 1029.6 631 79.6
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.4e-292 1009.2 634 77.1
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 5.3e-292 1007.3 634 78.2
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 5.8e-291 1003.8 678 74.0
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 5.8e-291 1003.8 631 78.1
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 3.8e-290 1001.1 634 77.0
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.1e-289 999.6 634 76.5
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.4e-289 999.2 634 76.8
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.9e-289 998.8 634 77.0
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 4.6e-288 994.2 634 77.1
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 8.7e-287 989.9 629 77.3
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 8.7e-287 989.9 635 76.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.8e-285 984.9 641 77.1
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.4e-284 982.6 637 76.5
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.1e-284 981.5 638 77.1
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 5.3e-284 980.7 631 75.6
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.5e-283 979.2 632 75.5
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 6.4e-282 973.8 641 76.1
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.9e-281 972.2 641 76.3
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 9.3e-281 969.9 634 74.4
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 9.6e-278 959.9 613 76.5
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.3e-277 959.5 634 74.9
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 2.1e-277 958.7 636 72.6
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.1e-276 956.4 633 73.8
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 1.2e-275 953.0 634 73.2
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.3e-274 949.5 632 72.9
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.9e-273 945.7 634 72.7
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 5.5e-273 944.1 633 73.5
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.0e-271 939.9 634 72.6
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.3e-271 939.5 638 72.9
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.3e-271 938.7 611 74.1
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 6.7e-271 937.2 632 72.3
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 4.3e-270 934.5 576 77.8
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 2.8e-269 931.8 634 71.9
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.8e-268 929.1 626 72.5
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.1e-268 927.9 626 73.0
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 6.9e-268 927.2 627 73.2
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 3.2e-265 918.3 635 72.3
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 5.5e-265 917.5 626 71.2
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 9.4e-265 916.8 634 70.5
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 2.7e-264 915.2 638 69.3
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 4.6e-264 914.4 634 69.7
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 2.3e-263 912.1 633 70.3
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 5.1e-263 911.0 634 69.1
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 8.8e-263 910.2 643 68.9
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 3.3e-262 908.3 634 69.6
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 5.7e-262 907.5 635 69.8
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 7.4e-262 907.1 632 70.1
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.1e-260 903.3 660 68.6
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 5.3e-260 901.0 667 68.4
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.5e-259 899.4 626 68.4
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.6e-259 898.7 626 68.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 3.4e-259 898.3 628 68.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.3e-258 896.3 595 72.1
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 3.2e-257 891.7 640 69.4
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.6e-256 889.4 631 68.6
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.3e-255 885.6 599 72.6
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.7e-255 884.0 610 69.2
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 5.7e-254 880.9 625 71.2
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.7e-254 880.9 627 71.0
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 3.7e-253 878.2 629 67.9
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.1e-252 876.7 630 67.0
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.4e-249 866.3 626 66.3
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.0e-247 860.1 611 69.2
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 2.3e-247 859.0 629 65.7
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.9e-247 858.2 633 66.0
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 3.7e-245 851.7 632 66.8
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 6.3e-245 850.9 629 65.2
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 2.4e-244 849.0 637 64.8
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 7.0e-244 847.4 625 67.7
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 1.1e-241 840.1 587 68.7
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.5e-241 839.0 638 65.0
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 4.2e-241 838.2 575 69.0
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 5.5e-241 837.8 636 63.8
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.0e-239 833.6 626 66.6
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 2.0e-238 829.3 636 64.0
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 4.4e-238 828.2 633 64.1
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 5.7e-238 827.8 636 64.2
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.2e-237 825.9 627 67.9
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.4e-236 823.2 635 65.8
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.6e-235 819.7 636 63.7
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.6e-235 819.7 636 63.7
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 7.7e-235 817.4 633 64.0
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.8e-234 815.1 591 65.8
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 8.8e-231 803.9 629 62.8
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 2.0e-230 802.7 631 63.2
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.6e-224 783.1 564 67.0
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 7.3e-217 757.7 634 59.8
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 2.5e-209 732.6 603 59.5
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.7e-202 709.9 440 77.7
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.1e-196 690.6 448 75.9
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 1.9e-185 653.3 449 69.5
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.9e-185 653.3 496 64.7
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 4.0e-183 645.6 401 79.1
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 3.8e-181 639.0 637 52.0
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 2.1e-176 623.2 416 71.2
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 9.0e-175 617.8 644 49.5
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 7.4e-153 545.0 609 46.8
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 9.0e-151 538.1 418 65.1
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.5e-150 535.8 399 65.4
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.5e-145 520.8 637 44.6
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 2.2e-133 480.3 417 62.4
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 6.3e-128 462.2 610 45.4
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 8.6e-109 398.7 277 73.3
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.6e-107 394.4 771 32.4
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.3e-53 215.3 185 58.4
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.1e-47 195.7 177 56.5
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 5.1e-45 186.8 214 49.1
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.1e-43 181.4 163 60.1
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.2e-39 167.5 152 54.6
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 7.9e-30 136.3 82 81.7
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.4e-26 125.6 217 41.9
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.1e-18 99.4 92 56.5
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 9.1e-18 96.3 63 79.4
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.1e-10 71.2 39 84.6
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 2.0e-09 68.6 47 70.2
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.7e-08 65.5 40 77.5
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 3.2e-07 61.2 232 25.4
PGSC0003DMG400002755 Solanum tuberosum HOM05D000740 ORTHO05D007141 2.7e-06 58.2 148 28.4


User provided reference genes

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