Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 6.6e-210 733.8 370 100.0
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 1.4e-151 540.0 349 73.9
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 4.2e-148 528.5 353 72.8
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 4.6e-147 525.0 350 70.6
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 6.0e-147 524.6 351 73.5
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 3.9e-146 521.9 353 70.5
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 1.9e-145 519.6 361 70.6
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 1.6e-144 516.5 370 69.2
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 2.8e-144 515.8 335 73.1
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 4.0e-143 511.9 341 73.3
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 9.0e-143 510.8 372 68.5
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.0e-141 507.3 341 72.7
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 2.9e-141 505.8 334 73.1
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 1.1e-140 503.8 364 69.5
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 2.5e-140 502.7 374 69.3
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 7.1e-140 501.1 332 72.6
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 1.2e-139 500.4 328 72.9
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 2.1e-139 499.6 363 68.0
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 2.7e-139 499.2 329 70.5
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 2.7e-139 499.2 349 68.5
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 3.5e-139 498.8 371 67.4
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 6.1e-139 498.0 367 68.4
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 7.9e-139 497.7 352 69.3
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 1.0e-138 497.3 338 71.0
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 1.8e-138 496.5 362 68.2
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 2.3e-138 496.1 361 68.1
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 3.9e-138 495.4 354 67.8
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 5.1e-138 495.0 329 72.0
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 6.7e-138 494.6 329 72.6
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 8.7e-138 494.2 336 68.8
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.1e-137 493.8 367 67.8
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.5e-137 493.4 337 71.2
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 2.5e-137 492.7 369 66.9
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 3.3e-137 492.3 355 68.5
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 5.7e-137 491.5 336 68.5
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.6e-136 490.0 337 70.9
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 2.2e-136 489.6 362 66.9
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 1.1e-135 487.3 362 67.4
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 1.4e-135 486.9 349 69.3
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 1.4e-135 486.9 337 68.2
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.4e-135 486.1 336 72.0
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 2.4e-135 486.1 330 71.5
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.1e-135 485.7 336 71.7
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 4.1e-135 485.3 370 65.4
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 4.1e-135 485.3 351 68.1
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 9.0e-135 484.2 338 67.8
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 9.0e-135 484.2 338 69.2
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 1.5e-134 483.4 363 66.4
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 2.6e-134 482.6 338 68.9
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 5.9e-134 481.5 328 69.5
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 1.0e-133 480.7 338 68.9
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 3.8e-133 478.8 328 69.2
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 3.8e-133 478.8 330 69.4
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 6.5e-133 478.0 338 68.6
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.9e-132 476.5 327 69.1
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 1.9e-132 476.5 332 69.6
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.6e-131 473.4 344 66.0
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 2.7e-131 472.6 332 69.0
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 4.6e-131 471.9 353 66.6
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 6.1e-131 471.5 329 67.8
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 2.2e-128 463.0 330 67.9
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 2.2e-128 463.0 309 70.2
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 2.4e-127 459.5 350 65.1
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 7.7e-126 454.5 375 61.9
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 1.7e-125 453.4 375 61.9
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 1.1e-124 450.7 337 65.6
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.4e-124 450.3 332 66.9
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.9e-124 449.9 332 66.9
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 7.2e-124 448.0 372 62.1
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 2.1e-123 446.4 331 64.0
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 4.7e-123 445.3 332 64.8
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 7.9e-123 444.5 328 66.2
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.0e-122 444.1 324 67.3
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 1.4e-122 443.7 397 55.9
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 1.8e-122 443.4 318 67.0
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 3.0e-122 442.6 334 64.4
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 3.9e-122 442.2 361 62.0
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.1e-121 440.7 372 60.8
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 1.5e-121 440.3 343 63.3
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 7.4e-121 438.0 316 66.5
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 1.3e-120 437.2 331 64.0
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 2.2e-120 436.4 331 64.4
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 4.8e-120 435.3 320 64.7
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 1.1e-119 434.1 345 61.2
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 2.4e-119 433.0 360 59.7
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 3.1e-119 432.6 337 62.3
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 9.1e-119 431.0 360 60.8
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 2.6e-118 429.5 331 64.0
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 5.5e-116 421.8 339 61.9
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 9.4e-116 421.0 321 62.3
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 3.9e-114 415.6 332 61.4
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 3.9e-114 415.6 293 69.6
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 5.2e-114 415.2 285 69.5
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 8.8e-114 414.5 599 42.9
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 2.0e-113 413.3 310 62.9
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 4.4e-113 412.1 332 63.0
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 3.7e-112 409.1 328 60.4
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 8.2e-112 407.9 291 67.4
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 1.7e-109 400.2 291 68.4
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.2e-109 399.8 323 63.5
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 2.1e-107 393.3 292 64.0
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 2.1e-107 393.3 292 64.0
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 6.8e-106 388.3 357 56.0
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 2.8e-104 382.9 347 57.6
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 6.3e-104 381.7 276 64.9
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.4e-103 380.6 262 68.3
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 1.8e-103 380.2 238 72.3
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 3.8e-101 372.5 317 60.6
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 3.8e-101 372.5 324 56.5
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 6.5e-101 371.7 268 64.9
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 1.2e-99 367.5 318 56.3
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 2.1e-99 366.7 325 54.8
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 4.4e-97 359.0 285 62.1
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 2.8e-96 356.3 296 60.1
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 6.3e-96 355.1 376 51.3
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 5.0e-93 345.5 360 51.7
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 5.6e-92 342.0 322 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 1.8e-87 327.0 308 51.9
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 9.2e-87 324.7 199 76.9
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 4.6e-86 322.4 204 73.5
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 1.3e-85 320.9 253 60.1
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 6.4e-80 302.0 350 45.1
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 2.7e-78 296.6 176 78.4
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.4e-71 274.2 194 66.5
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 4.6e-70 269.2 377 43.2
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 1.8e-66 257.3 312 41.7
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 8.9e-66 255.0 245 51.8
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.2e-65 254.6 208 59.6
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.7e-64 250.8 304 46.1
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 2.5e-52 210.3 160 61.9
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 1.6e-51 207.6 139 70.5
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 1.6e-51 207.6 261 42.1
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.8e-51 206.8 173 56.1
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 1.8e-50 204.1 256 42.6
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 1.5e-49 201.1 225 51.1
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 2.4e-47 193.7 209 48.8
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 4.2e-47 193.0 209 48.8
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.1e-44 184.9 131 70.2
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 5.6e-44 182.6 286 36.0
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 5.1e-37 159.5 154 50.6
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 2.8e-35 153.7 294 34.4
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 1.2e-33 148.3 81 85.2
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 4.3e-28 129.8 138 54.3
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.9e-21 106.7 90 58.9
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 3.9e-21 106.7 90 58.9
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 1.5e-20 104.8 273 31.1
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 1.9e-20 104.4 120 45.0
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 1.3e-19 101.7 180 34.4
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.4e-18 98.2 112 49.1
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 5.0e-16 89.7 57 75.4
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 3.2e-15 87.0 48 83.3
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 3.6e-14 83.6 71 56.3
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 6.3e-11 72.8 58 60.3
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.4e-07 61.6 46 56.5
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 3.6e-06 57.0 27 88.9


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