Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0590 Cannabis sativa HOM05D009769 ORTHO05D000898 2.0e-141 505.8 255 100.0
CANSAT35G0470 Cannabis sativa HOM05D029669 ORTHO05D010823 1.9e-83 313.2 155 100.0
CANSAT54G2169 Cannabis sativa HOM05D009769 ORTHO05D010823 1.4e-81 307.0 229 73.4
CANSAT25G1172 Cannabis sativa HOM05D009769 ORTHO05D010823 4.0e-49 199.1 172 65.1
CANSAT21G2496 Cannabis sativa HOM05D009769 ORTHO05D010823 7.8e-45 184.9 166 53.6
CANSAT80G1287 Cannabis sativa HOM05D009769 ORTHO05D010823 6.6e-44 181.8 150 58.7
CANSAT78G0023 Cannabis sativa HOM05D009769 ORTHO05D010823 1.6e-26 124.0 216 38.4
CANSAT25G1981 Cannabis sativa HOM05D009769 ORTHO05D010823 3.7e-18 96.3 81 69.1
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 8.1e-18 95.1 157 35.7
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 8.1e-18 95.1 156 34.6
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 1.1e-17 94.7 159 34.6
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-17 94.7 157 35.7
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-17 94.4 157 35.7
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 2.4e-17 93.6 148 35.1
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 7.6e-16 88.6 205 28.3
Atru.chr5.2180 Acer truncatum HOM05D004096 ORTHO05D000898 1.3e-15 87.8 151 33.8
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 2.9e-15 86.7 160 33.8
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.2e-14 83.2 157 29.9
Ciclev10023350m.g Citrus clementina HOM05D004096 ORTHO05D000898 1.2e-13 81.3 149 32.9
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.5e-13 79.7 112 33.9
FAN04G2812 Fragaria x ananassa HOM05D007993 ORTHO05D000898 4.6e-13 79.3 162 34.0
FAN20G2401 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.0e-12 78.2 162 32.7
FvH4_4g28760 Fragaria vesca HOM05D007993 ORTHO05D000898 3.9e-12 76.3 162 32.7
RcHm_v2.0_Chr3g0478081 Rosa chinensis HOM05D004096 ORTHO05D000898 3.9e-12 76.3 162 32.1
FAN12G1044 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.7e-12 75.5 162 32.7
FAN09G4582 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.7e-12 75.1 162 32.7
FAN27G2741 Fragaria x ananassa HOM05D007993 ORTHO05D000898 8.7e-12 75.1 162 32.7
FAN05G1382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-11 74.7 157 30.6
FAN16G2434 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-11 74.7 157 30.6
FAN22G0991 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-11 74.7 157 30.6
FAN25G0030 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-11 74.7 157 30.6
FAN28G0966 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.1e-11 74.7 162 32.7
RcHm_v2.0_Chr2g0155611 Rosa chinensis HOM05D010969 ORTHO05D015656 1.1e-11 74.7 154 33.1
CANSAT64G2369 Cannabis sativa HOM05D014696 ORTHO05D022147 1.5e-11 74.3 156 30.1
FvH4_1g29141 Fragaria vesca HOM05D007993 ORTHO05D000898 1.5e-11 74.3 162 32.1
Ciclev10017925m.g Citrus clementina HOM05D004096 ORTHO05D000898 2.5e-11 73.6 152 29.6
FvH4_7g31230 Fragaria vesca HOM05D000045 ORTHO05D000067 2.5e-11 73.6 157 29.9
FAN16G0074 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.5e-11 73.6 162 32.1
Ciclev10029867m.g Citrus clementina HOM05D007993 ORTHO05D000898 3.3e-11 73.2 127 33.1
FAN08G1236 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.3e-11 73.2 162 32.1
Prupe.6G153700 Prunus persica HOM05D004096 ORTHO05D000898 3.3e-11 73.2 199 29.1
FvH4_7g05770 Fragaria vesca HOM05D004096 ORTHO05D000898 5.7e-11 72.4 119 31.9
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 5.7e-11 72.4 156 30.8
FAN03G2392 Fragaria x ananassa HOM05D007993 ORTHO05D000898 7.4e-11 72.0 162 32.1
Atru.chr13.1926 Acer truncatum HOM05D007651 ORTHO05D000898 1.3e-10 71.2 128 33.6
Dinv14442 Davidia involucrata HOM05D008396 ORTHO05D000898 1.6e-10 70.9 150 28.7
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 1.6e-10 70.9 157 29.3
FAN15G0550 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.6e-10 70.9 157 29.3
FvH4_7g03531 Fragaria vesca HOM05D007993 ORTHO05D000898 2.1e-10 70.5 117 38.5
RcHm_v2.0_Chr3g0485951 Rosa chinensis HOM05D004096 ORTHO05D000898 2.1e-10 70.5 188 29.3
FvH4_5g19752 Fragaria vesca HOM05D004096 ORTHO05D000898 2.8e-10 70.1 158 31.0
FAN12G2805 Fragaria x ananassa HOM05D007993 ORTHO05D000898 2.8e-10 70.1 162 31.5
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 2.8e-10 70.1 232 27.2
FvH4_7g12251 Fragaria vesca HOM05D004096 ORTHO05D000898 3.7e-10 69.7 158 31.0
FAN14G0071 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.7e-10 69.7 162 31.5
FvH4_2g25151 Fragaria vesca HOM05D004096 ORTHO05D010213 1.1e-09 68.2 166 27.1
FAN13G2291 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-09 68.2 157 28.7
FAN20G0366 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-09 68.2 215 25.1
FAN25G1629 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-09 68.2 159 30.8
FAN13G0573 Fragaria x ananassa HOM05D011469 ORTHO05D014217 1.4e-09 67.8 108 32.4
FAN18G3521 Fragaria x ananassa HOM05D011469 ORTHO05D014217 1.4e-09 67.8 108 32.4
CANSAT56G3495 Cannabis sativa HOM05D014696 ORTHO05D022147 1.8e-09 67.4 160 29.4
FAN10G0790 Fragaria x ananassa HOM05D010969 ORTHO05D015656 1.8e-09 67.4 174 28.7
FvH4_4g03327 Fragaria vesca HOM05D011469 ORTHO05D014217 2.4e-09 67.0 154 32.5
FAN09G4395 Fragaria x ananassa HOM05D004096 ORTHO05D025475 5.3e-09 65.9 159 30.2
FAN28G2534 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.3e-09 65.9 162 30.9
FvH4_1g25481 Fragaria vesca HOM05D004096 ORTHO05D010213 6.9e-09 65.5 166 26.5
FvH4_2g27901 Fragaria vesca HOM05D004096 ORTHO05D000898 6.9e-09 65.5 159 30.2
RcHm_v2.0_Chr1g0347831 Rosa chinensis HOM05D004096 ORTHO05D000898 6.9e-09 65.5 150 31.3
FvH4_6g40313 Fragaria vesca HOM05D011469 ORTHO05D014217 9.0e-09 65.1 154 31.8
FvH4_c6g00030 Fragaria vesca HOM05D011469 ORTHO05D014217 9.0e-09 65.1 154 31.8
FAN03G1966 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.0e-09 65.1 141 27.0
FAN10G4083 Fragaria x ananassa HOM05D010969 ORTHO05D015656 9.0e-09 65.1 120 30.8
FAN09G4098 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-08 64.7 159 29.6
FAN17G1842 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.2e-08 64.7 133 33.8
FAN22G2114 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-08 64.7 156 29.5
FAN24G2359 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-08 64.7 159 30.2
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 1.2e-08 64.7 170 32.9
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 1.2e-08 64.7 170 32.9
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 1.2e-08 64.7 170 32.9
FvH4_4g15990 Fragaria vesca HOM05D010969 ORTHO05D015656 1.5e-08 64.3 99 35.4
FAN20G2217 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.5e-08 64.3 119 28.6
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 1.5e-08 64.3 190 28.9
FvH4_1g25490 Fragaria vesca HOM05D011469 ORTHO05D014217 2.0e-08 63.9 154 31.8
FAN02G1156 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-08 63.9 137 31.4
FAN13G2044 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.0e-08 63.9 137 31.4
FAN13G3102 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.0e-08 63.9 137 31.4
FAN18G1768 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.0e-08 63.9 137 31.4
FAN18G2232 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-08 63.9 137 31.4
FAN20G2128 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.0e-08 63.9 137 31.4
FAN28G1999 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.0e-08 63.9 137 31.4
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 2.0e-08 63.9 131 35.9
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 2.0e-08 63.9 171 33.3
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 2.0e-08 63.9 171 33.3
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 2.6e-08 63.5 171 33.9
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.6e-08 63.5 156 30.1
FAN27G2446 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.6e-08 63.5 120 34.2
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 2.6e-08 63.5 155 31.6
Atru.chr4.885 Acer truncatum HOM05D007993 ORTHO05D000898 3.4e-08 63.2 119 33.6
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 3.4e-08 63.2 131 34.4
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 3.4e-08 63.2 154 30.5
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 4.5e-08 62.8 139 33.8
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 4.5e-08 62.8 154 30.5
Atru.chr1.1775 Acer truncatum HOM05D007651 ORTHO05D001192 5.8e-08 62.4 154 31.8
FvH4_2g27931 Fragaria vesca HOM05D004096 ORTHO05D029602 5.8e-08 62.4 160 30.0
FvH4_3g26550 Fragaria vesca HOM05D007993 ORTHO05D000898 5.8e-08 62.4 177 29.9
FAN06G0315 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.8e-08 62.4 156 29.5
FAN09G2500 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.8e-08 62.4 117 35.0
FAN25G2264 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.8e-08 62.4 117 35.0
FAN28G0955 Fragaria x ananassa HOM05D008674 ORTHO05D000898 5.8e-08 62.4 109 34.9
Atru.chr10.463 Acer truncatum HOM05D007993 ORTHO05D000898 7.6e-08 62.0 119 33.6
CiPaw.15G020600 Carya illinoinensis HOM05D007651 ORTHO05D001192 7.6e-08 62.0 154 30.5
FAN08G3199 Fragaria x ananassa HOM05D008674 ORTHO05D000898 7.6e-08 62.0 117 34.2
GSVIVG01030888001 Vitis vinifera HOM05D007651 ORTHO05D001192 7.6e-08 62.0 127 33.9
Cpa.g.sc116.14 Carica papaya HOM05D007651 ORTHO05D001192 1.0e-07 61.6 154 29.9
CiPaw.04G045400 Carya illinoinensis HOM05D007651 ORTHO05D001192 1.0e-07 61.6 154 30.5
Ciclev10011294m.g Citrus clementina HOM05D007651 ORTHO05D001192 1.0e-07 61.6 208 27.4
Migut.L00474 Erythranthe guttata HOM05D007651 ORTHO05D001192 1.0e-07 61.6 131 32.8
FvH4_5g30680 Fragaria vesca HOM05D007993 ORTHO05D000898 1.0e-07 61.6 156 30.1
FAN16G3666 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.0e-07 61.6 117 35.0
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 1.0e-07 61.6 154 31.2
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 1.0e-07 61.6 154 31.2
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 1.3e-07 61.2 127 34.6
Prupe.3G152100 Prunus persica HOM05D007651 ORTHO05D001192 1.3e-07 61.2 154 30.5
RcHm_v2.0_Chr4g0423011 Rosa chinensis HOM05D004096 ORTHO05D000898 1.3e-07 61.2 153 30.1
Duzib106G0239 Durio zibethinus HOM05D007651 ORTHO05D000898 1.7e-07 60.8 128 34.4
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 1.7e-07 60.8 131 32.8
FAN04G2605 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.7e-07 60.8 110 34.5
FAN06G1622 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-07 60.8 156 30.1
Hma1.2p1_1820F.1_g304200 Hydrangea macrophylla HOM05D007651 ORTHO05D001192 1.7e-07 60.8 131 33.6
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 2.2e-07 60.5 131 34.4
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 2.2e-07 60.5 170 32.4
MSTRG.3530 Avicennia marina HOM05D007651 ORTHO05D001192 2.9e-07 60.1 127 33.1
COL.COLO4_10042 Corchorus olitorius HOM05D007651 ORTHO05D000898 2.9e-07 60.1 128 34.4
Dinv19003 Davidia involucrata HOM05D007651 ORTHO05D000898 2.9e-07 60.1 127 33.1
Potri.004G091800 Populus trichocarpa HOM05D007651 ORTHO05D000898 2.9e-07 60.1 154 28.6
Actinidia17653 Actinidia chinensis HOM05D007651 ORTHO05D000898 3.8e-07 59.7 226 28.3
CANSAT78G1112 Cannabis sativa HOM05D009769 ORTHO05D010823 3.8e-07 59.7 58 62.1
FvH4_7g10251 Fragaria vesca HOM05D004096 ORTHO05D029602 3.8e-07 59.7 206 28.6
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 3.8e-07 59.7 128 34.4
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 5.0e-07 59.3 155 27.7
FAN13G3014 Fragaria x ananassa HOM05D007993 ORTHO05D000898 5.0e-07 59.3 117 33.3
FAN21G3088 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.0e-07 59.3 121 27.3
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 5.0e-07 59.3 131 32.1
CANSAT01G2817 Cannabis sativa HOM05D007651 ORTHO05D001192 6.5e-07 58.9 131 31.3
Haze_14211 Corylus avellana HOM05D006412 ORTHO05D008025 6.5e-07 58.9 127 33.1
FAN07G1300 Fragaria x ananassa HOM05D007993 ORTHO05D000898 6.5e-07 58.9 159 31.4
FAN26G1477 Fragaria x ananassa HOM05D004096 ORTHO05D010213 6.5e-07 58.9 141 26.2
Gohir.A06G176700 Gossypium hirsutum HOM05D007651 ORTHO05D000898 6.5e-07 58.9 127 33.9
FAN09G4807 Fragaria x ananassa HOM05D004096 ORTHO05D029602 8.4e-07 58.5 137 32.8
FAN17G0441 Fragaria x ananassa HOM05D004096 ORTHO05D010213 8.4e-07 58.5 136 26.5
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 8.4e-07 58.5 131 33.6
FAN24G2093 Fragaria x ananassa HOM05D004096 ORTHO05D029602 1.1e-06 58.2 206 28.2
FAN10G0819 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.9e-06 57.4 117 33.3
FAN03G2350 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-06 56.6 97 32.0
FAN19G1351 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.2e-06 56.6 97 32.0
CANSAT54G2607 Cannabis sativa HOM05D029669 ORTHO05D010823 4.2e-06 56.2 25 100.0
FAN03G2973 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.2e-06 56.2 129 25.6
FAN15G0356 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.2e-06 56.2 129 24.0
FvH4_4g08581 Fragaria vesca HOM05D008674 ORTHO05D000898 5.5e-06 55.8 126 34.1
FAN11G1544 Fragaria x ananassa HOM05D008674 ORTHO05D012371 5.5e-06 55.8 93 37.6
CSS0020998 Camellia sinensis var. sinensis HOM05D007651 ORTHO05D000898 9.3e-06 55.1 133 33.8


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