Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 1.6e-137 493.0 305 100.0
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 3.0e-83 312.8 246 66.7
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 8.6e-83 311.2 249 65.1
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 2.1e-81 306.6 254 67.3
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 1.4e-80 303.9 249 65.1
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 2.4e-80 303.1 241 67.2
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 3.1e-80 302.8 243 66.7
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 6.9e-80 301.6 252 63.5
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 1.7e-78 297.0 248 66.5
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 8.4e-78 294.7 250 66.4
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 2.4e-77 293.1 235 66.0
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 4.2e-77 292.4 250 65.6
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 9.3e-77 291.2 250 62.4
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 2.1e-76 290.0 199 72.4
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 2.1e-76 290.0 244 64.8
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 2.7e-76 289.7 251 65.7
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 2.7e-76 289.7 251 65.7
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 3.5e-76 289.3 194 70.6
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 4.6e-76 288.9 194 70.6
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 4.6e-76 288.9 199 71.9
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 6.0e-76 288.5 196 72.4
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 7.8e-76 288.1 217 67.3
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 1.0e-75 287.7 217 69.1
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.3e-75 287.3 249 62.2
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 2.3e-75 286.6 201 69.2
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 2.3e-75 286.6 256 63.3
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 2.3e-75 286.6 218 68.8
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 5.1e-75 285.4 221 66.5
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 5.1e-75 285.4 199 70.9
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 6.6e-75 285.0 243 60.9
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 6.6e-75 285.0 243 59.7
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 1.5e-74 283.9 246 61.4
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 1.9e-74 283.5 247 61.5
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 1.9e-74 283.5 258 60.9
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 4.3e-74 282.3 214 65.9
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 7.3e-74 281.6 220 65.0
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 9.6e-74 281.2 201 68.2
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 9.6e-74 281.2 177 74.6
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 1.3e-73 280.8 246 61.0
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 1.3e-73 280.8 177 73.4
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 1.3e-73 280.8 228 63.6
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 1.3e-73 280.8 242 60.7
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 2.1e-73 280.0 226 65.0
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 2.8e-73 279.6 177 75.1
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 3.6e-73 279.3 224 61.6
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 3.6e-73 279.3 177 75.1
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 3.6e-73 279.3 177 75.1
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 3.6e-73 279.3 177 75.1
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 3.6e-73 279.3 197 69.0
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 8.1e-73 278.1 247 59.5
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 1.1e-72 277.7 172 74.4
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 1.1e-72 277.7 224 61.2
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 1.4e-72 277.3 259 58.3
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 1.4e-72 277.3 225 65.3
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 1.8e-72 276.9 177 74.6
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 1.8e-72 276.9 218 65.6
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 3.1e-72 276.2 214 65.9
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 3.1e-72 276.2 252 59.5
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 3.1e-72 276.2 291 56.4
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 4.0e-72 275.8 215 66.0
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 4.0e-72 275.8 254 62.2
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 5.3e-72 275.4 247 59.1
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 1.2e-71 274.2 219 66.7
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 2.0e-71 273.5 228 62.7
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 4.5e-71 272.3 218 66.1
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 5.8e-71 271.9 221 63.8
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 5.8e-71 271.9 238 59.2
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 9.9e-71 271.2 241 61.4
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 1.7e-70 270.4 182 72.0
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 1.7e-70 270.4 216 62.5
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 3.8e-70 269.2 252 59.9
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 3.8e-70 269.2 216 64.8
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 8.4e-70 268.1 216 61.1
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 1.4e-69 267.3 180 71.7
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 3.2e-69 266.2 242 59.1
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 1.2e-68 264.2 178 71.3
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 2.1e-68 263.5 224 59.4
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 4.6e-68 262.3 190 67.4
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 6.0e-68 261.9 228 59.6
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 3.0e-67 259.6 220 63.2
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 6.7e-67 258.5 256 56.2
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 2.5e-66 256.5 187 66.8
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 4.3e-66 255.8 198 65.7
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 4.3e-66 255.8 212 61.8
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 5.6e-66 255.4 215 60.9
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 5.6e-66 255.4 203 65.5
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 4.8e-65 252.3 254 54.3
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 8.1e-65 251.5 239 58.2
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 1.4e-64 250.8 180 67.2
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 1.5e-63 247.3 233 56.2
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 2.0e-63 246.9 198 63.6
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 1.7e-62 243.8 195 61.0
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 2.2e-62 243.4 212 60.8
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 2.9e-62 243.0 223 57.4
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 4.9e-62 242.3 228 60.1
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 3.3e-58 229.6 192 62.5
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.8e-56 223.8 166 68.7
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 5.5e-53 212.2 214 56.5
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 3.7e-49 199.5 273 49.5
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 4.8e-49 199.1 115 79.1
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 9.0e-48 194.9 195 61.0
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 1.2e-47 194.5 127 74.8
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 1.9e-37 160.6 158 55.7
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 2.8e-33 146.7 109 61.5
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 4.5e-31 139.4 157 56.7
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.4e-29 134.4 155 43.2
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 1.4e-29 134.4 155 43.2
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 1.8e-27 127.5 226 35.8
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 9.7e-26 121.7 144 43.1
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 2.4e-24 117.1 98 50.0
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 1.2e-23 114.8 92 60.9
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 6.7e-19 99.0 66 65.2
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 3.7e-17 93.2 98 53.1
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 3.1e-16 90.1 110 42.7
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 2.2e-14 84.0 72 52.8
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 2.2e-14 84.0 72 52.8
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 2.5e-13 80.5 66 57.6
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 1.2e-12 78.2 163 35.6
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 1.6e-12 77.8 88 47.7
BcaB06g25810 Brassica carinata HOM05D006827 ORTHO05D023991 6.3e-09 65.9 35 80.0
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 3.1e-08 63.5 128 35.2
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 4.1e-08 63.2 88 35.2
VMungo1383G3461 Vigna mungo HOM05D006827 ORTHO05D008725 1.2e-07 61.6 81 45.7
TAR633G1668 Trochodendron aralioides HOM05D006827 ORTHO05D023991 2.9e-06 57.0 33 75.8


User provided reference genes

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