Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 6.1e-180 634.0 320 100.0
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 3.8e-166 588.2 312 96.5
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 9.9e-138 493.8 303 80.9
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.7e-137 493.0 303 81.8
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.9e-136 489.6 304 78.0
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 7.1e-136 487.6 303 80.2
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.5e-135 485.3 303 80.2
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.5e-135 485.3 304 78.0
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.5e-135 485.3 304 78.0
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 3.5e-135 485.3 304 77.6
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.7e-134 483.0 303 79.9
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 2.3e-134 482.6 303 78.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.3e-134 482.6 303 79.5
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.9e-134 481.9 303 79.5
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 6.6e-134 481.1 301 78.7
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 6.6e-134 481.1 303 77.6
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 8.6e-134 480.7 304 79.9
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.5e-133 479.9 303 78.2
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.5e-133 479.9 304 79.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.3e-133 478.8 303 79.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 5.6e-133 478.0 303 78.2
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 5.6e-133 478.0 303 78.2
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 1.2e-132 476.9 303 78.9
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.2e-132 476.9 301 79.1
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 1.6e-132 476.5 301 79.4
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 4.7e-132 474.9 301 78.7
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 6.2e-132 474.6 303 77.2
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 8.1e-132 474.2 303 78.5
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.8e-131 473.0 303 78.5
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 4.0e-131 471.9 304 77.3
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 5.2e-131 471.5 304 76.3
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 8.9e-131 470.7 303 77.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.5e-130 469.9 303 77.9
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 5.8e-130 468.0 303 76.2
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 9.9e-130 467.2 305 76.4
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 9.9e-130 467.2 303 77.2
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.7e-129 466.5 303 76.6
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.7e-129 466.5 303 76.6
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.7e-129 466.5 303 76.9
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 2.2e-129 466.1 301 78.1
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 3.8e-129 465.3 304 77.3
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 6.4e-129 464.5 303 76.6
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 6.4e-129 464.5 303 75.6
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.1e-128 463.8 303 75.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.4e-128 463.4 304 77.0
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.4e-128 463.4 304 77.0
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 3.2e-128 462.2 303 76.2
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.1e-127 459.5 302 76.2
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.7e-127 459.1 301 75.1
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 6.0e-127 458.0 304 75.0
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.7e-126 456.4 303 74.6
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.7e-126 456.4 303 74.9
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.1e-126 454.9 303 73.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.7e-126 454.1 304 74.7
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.5e-125 453.4 303 74.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.5e-125 452.6 303 74.3
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 7.3e-125 451.1 303 72.9
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 7.3e-125 451.1 303 73.6
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-122 443.7 296 73.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 1.5e-122 443.4 305 73.1
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 6.4e-121 438.0 303 71.3
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 5.4e-120 434.9 305 71.1
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 3.5e-119 432.2 306 70.3
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 7.9e-119 431.0 295 73.9
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 7.9e-119 431.0 306 70.6
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.0e-118 430.6 304 71.1
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.3e-118 430.3 305 71.8
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.0e-118 429.1 304 70.4
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 5.6e-117 424.9 304 69.4
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 7.4e-117 424.5 304 69.1
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 7.4e-117 424.5 305 71.1
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 9.6e-117 424.1 304 69.4
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 9.6e-117 424.1 304 69.4
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 3.6e-116 422.2 304 68.1
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 8.1e-116 421.0 302 69.5
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 8.1e-116 421.0 303 70.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 1.4e-115 420.2 304 68.4
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 2.4e-115 419.5 304 68.1
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.4e-115 419.5 306 70.3
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 4.0e-115 418.7 302 68.9
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 9.0e-115 417.5 302 68.5
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.5e-114 416.8 304 68.1
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.5e-114 416.8 277 75.1
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.0e-114 416.4 304 68.4
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 4.5e-114 415.2 304 67.4
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.7e-113 413.3 302 68.5
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 2.9e-113 412.5 249 80.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.1e-112 410.6 302 68.5
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.1e-112 410.6 302 67.2
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.1e-112 410.6 302 67.2
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.1e-112 410.6 302 67.2
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.9e-112 409.8 303 67.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 4.2e-112 408.7 306 69.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.2e-111 407.1 313 69.0
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 3.5e-111 405.6 249 78.7
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 1.3e-110 403.7 289 70.2
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.0e-106 389.8 304 66.8
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.9e-102 375.6 232 78.4
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.7e-100 369.0 259 72.2
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 5.3e-99 365.2 225 77.8
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 5.3e-99 365.2 301 62.5
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.2e-98 364.0 305 61.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 3.4e-98 362.5 213 81.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.0e-97 360.9 235 75.3
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.1e-96 357.5 224 75.9
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.6e-95 352.1 220 77.3
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 7.9e-95 351.3 307 60.6
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 1.2e-90 337.4 255 66.3
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 3.0e-86 322.8 251 64.1
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 8.8e-86 321.2 223 71.3
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 6.9e-83 311.6 279 57.7
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 2.2e-76 290.0 341 51.0
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.0e-73 281.2 173 76.3
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.1e-71 273.5 303 51.8
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 4.7e-55 219.2 318 41.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 5.4e-51 205.7 141 71.6
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.3e-46 190.3 163 60.1
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 2.3e-38 163.7 345 35.1
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.1e-38 163.3 303 38.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 4.1e-35 152.9 179 46.9
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.5e-32 144.4 107 71.0
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.8e-31 140.2 88 71.6
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 5.2e-30 136.0 89 73.0
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 9.9e-29 131.7 91 74.7
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 5.6e-24 115.9 72 75.0
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.2e-23 114.8 354 31.1
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 7.1e-19 99.0 88 62.5
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 8.7e-17 92.0 140 44.3
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.3e-16 89.7 61 60.7
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 9.0e-14 82.0 45 82.2
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.0e-13 80.9 66 68.2


User provided reference genes

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