Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G0258 Cannabis sativa HOM05D006586 ORTHO05D008254 6.0e-91 337.4 162 100.0
QL10p008791 Quercus lobata HOM05D006586 ORTHO05D008254 1.9e-49 199.5 158 62.7
Prupe.5G169900 Prunus persica HOM05D006586 ORTHO05D008254 9.7e-49 197.2 158 60.1
Haze_07550 Corylus avellana HOM05D006586 ORTHO05D008254 8.2e-48 194.1 153 62.7
MD14G1175900 Malus domestica HOM05D006586 ORTHO05D008254 1.1e-47 193.7 133 67.7
Cfa019173 Carpinus fangiana HOM05D006586 ORTHO05D008254 4.1e-47 191.8 153 62.1
CSS0037952 Camellia sinensis var. sinensis HOM05D006586 ORTHO05D008254 1.2e-46 190.3 153 61.4
Ciclev10019926m.g Citrus clementina HOM05D006586 ORTHO05D008254 2.6e-46 189.1 134 66.4
Dinv20623 Davidia involucrata HOM05D006586 ORTHO05D008254 3.4e-46 188.7 146 62.3
Thecc.03G024500 Theobroma cacao HOM05D006586 ORTHO05D008254 4.5e-46 188.3 133 66.9
RcHm_v2.0_Chr7g0193061 Rosa chinensis HOM05D006586 ORTHO05D008254 5.9e-46 188.0 133 67.7
CiPaw.11G023000 Carya illinoinensis HOM05D006586 ORTHO05D008254 1.3e-45 186.8 153 60.8
FAN18G2086 Fragaria x ananassa HOM05D006586 ORTHO05D008254 2.9e-45 185.7 159 56.6
CsaV3_1G001320 Cucumis sativus L. HOM05D006586 ORTHO05D008254 8.5e-45 184.1 153 58.8
Nn4g22672 Nelumbo nucifera HOM05D006586 ORTHO05D008254 1.1e-44 183.7 155 55.5
ClCG06G017160 Citrullus lanatus HOM05D006586 ORTHO05D008254 1.4e-44 183.3 153 58.2
FvH4_5g05750 Fragaria vesca HOM05D006586 ORTHO05D008254 1.4e-44 183.3 154 58.4
MELO3C026280.2 Cucumis melo HOM05D006586 ORTHO05D008254 3.2e-44 182.2 153 58.2
COL.COLO4_30118 Corchorus olitorius HOM05D006586 ORTHO05D008254 5.5e-44 181.4 153 58.2
FAN04G1931 Fragaria x ananassa HOM05D006586 ORTHO05D008254 5.5e-44 181.4 128 67.2
Nitab4.5_0006452g0010 Nicotiana tabacum HOM05D006586 ORTHO05D008254 5.5e-44 181.4 133 62.4
Peaxi162Scf00089g01633 Petunia axillaris HOM05D006586 ORTHO05D008254 2.1e-43 179.5 133 61.7
GSVIVG01007692001 Vitis vinifera HOM05D006586 ORTHO05D008254 2.1e-43 179.5 153 58.2
Nitab4.5_0001284g0040 Nicotiana tabacum HOM05D006586 ORTHO05D008254 3.6e-43 178.7 133 61.7
Manes.14G062950 Manihot esculenta HOM05D006586 ORTHO05D008254 4.6e-43 178.3 133 64.7
PGR083G0458 Punica granatum HOM05D006586 ORTHO05D008254 4.6e-43 178.3 133 63.9
Aqoxy3G02831 Aquilegia oxysepala HOM05D006586 ORTHO05D008254 6.1e-43 177.9 158 55.1
TAR371G0860 Trochodendron aralioides HOM05D006586 ORTHO05D008254 7.9e-43 177.6 158 53.2
Potri.015G080400 Populus trichocarpa HOM05D006586 ORTHO05D008254 1.0e-42 177.2 153 56.9
MBI16_g14603_MAGBIO Magnolia biondii HOM05D006586 ORTHO05D008254 1.8e-42 176.4 138 59.4
MBI16_g23863_MAGBIO Magnolia biondii HOM05D006586 ORTHO05D008254 1.8e-42 176.4 138 59.4
Sabra15G0072500 Salix brachista HOM05D006586 ORTHO05D008254 1.8e-42 176.4 129 65.1
Eucgr.B00243 Eucalyptus grandis HOM05D006586 ORTHO05D008254 2.3e-42 176.0 153 56.9
CAN.G1166.29 Capsicum annuum HOM05D006586 ORTHO05D008254 3.9e-42 175.3 133 60.9
Sabra15G0104600 Salix brachista HOM05D006586 ORTHO05D008254 6.7e-42 174.5 138 62.3
Solyc03g112600.4 Solanum lycopersicum HOM05D006586 ORTHO05D008254 6.7e-42 174.5 133 61.7
Actinidia19342 Actinidia chinensis HOM05D006586 ORTHO05D008254 1.1e-41 173.7 153 54.9
Sopen03g031690 Solanum pennellii HOM05D006586 ORTHO05D008254 1.1e-41 173.7 133 61.7
PGSC0003DMG400018168 Solanum tuberosum HOM05D006586 ORTHO05D008254 1.1e-41 173.7 133 60.9
Migut.O00130 Erythranthe guttata HOM05D006586 ORTHO05D008254 1.5e-41 173.3 130 60.0
Atru.chr9.2534_Atru.chr9.2535 Acer truncatum HOM05D006586 ORTHO05D008254 2.0e-41 172.9 158 52.5
SalBow5G1232 Salvia bowleyana HOM05D006586 ORTHO05D008254 2.5e-41 172.6 153 54.9
Thhalv10004134m.g Eutrema salsugineum HOM05D006586 ORTHO05D008254 3.3e-41 172.2 153 54.2
Hund09455 Selenicereus undatus HOM05D006586 ORTHO05D008254 3.3e-41 172.2 140 57.1
Cc04_g12530 Coffea canephora HOM05D006586 ORTHO05D008254 4.3e-41 171.8 133 58.6
PSO832G2003 Papaver somniferum HOM05D006586 ORTHO05D008254 4.3e-41 171.8 131 63.4
SalBow5G1744 Salvia bowleyana HOM05D006586 ORTHO05D008254 7.4e-41 171.0 153 53.6
PSO063G4773 Papaver somniferum HOM05D006586 ORTHO05D008254 9.7e-41 170.6 153 56.2
Sc10g0010150 Simmondsia chinensis HOM05D006586 ORTHO05D008254 1.3e-40 170.2 131 58.0
MSTRG.23151 Avicennia marina HOM05D006586 ORTHO05D008254 2.2e-40 169.5 160 52.5
BcaC04g23364 Brassica carinata HOM05D006586 ORTHO05D008254 2.2e-40 169.5 153 52.9
C09p09140 Brassica napus HOM05D006586 ORTHO05D008254 2.2e-40 169.5 153 52.9
BolC9t53826H Brassica oleracea HOM05D006586 ORTHO05D008254 2.2e-40 169.5 153 52.9
Oeu036011.1 Olea europaea HOM05D006586 ORTHO05D008254 2.2e-40 169.5 153 53.6
Lj9C445T6 Lonicera japonica HOM05D006586 ORTHO05D008254 4.8e-40 168.3 154 54.5
Gohir.D12G273500 Gossypium hirsutum HOM05D006586 ORTHO05D008254 1.4e-39 166.8 158 51.9
FAN13G1600 Fragaria x ananassa HOM05D006586 ORTHO05D008254 1.8e-39 166.4 134 61.9
Sp2g26210 Schrenkiella parvula HOM05D006586 ORTHO05D008254 1.8e-39 166.4 153 52.9
BcaB04g19943 Brassica carinata HOM05D006586 ORTHO05D008254 3.1e-39 165.6 153 52.9
A09p08080 Brassica napus HOM05D006586 ORTHO05D008254 3.1e-39 165.6 153 52.9
BraA09t36459Z Brassica rapa HOM05D006586 ORTHO05D008254 3.1e-39 165.6 153 52.9
Carub.0008s2381 Capsella rubella HOM05D006586 ORTHO05D008254 5.3e-39 164.9 130 60.8
Duzib205G0761 Durio zibethinus HOM05D006586 ORTHO05D008254 5.3e-39 164.9 154 53.2
Gohir.A12G272800 Gossypium hirsutum HOM05D006586 ORTHO05D008254 5.3e-39 164.9 158 51.9
Rhsim08G0174900 Rhododendron simsii HOM05D006586 ORTHO05D008254 5.3e-39 164.9 153 54.9
Gorai.008G293900 Gossypium raimondii HOM05D006586 ORTHO05D008254 6.9e-39 164.5 158 51.3
AT5G63080 Arabidopsis thaliana HOM05D006586 ORTHO05D008254 1.2e-38 163.7 153 52.3
EL10Ac5g10701 Beta vulgaris HOM05D006586 ORTHO05D008254 1.2e-38 163.7 152 52.6
Lsat_1_v5_gn_4_75921 Lactuca sativa HOM05D006586 ORTHO05D008254 1.2e-38 163.7 141 57.4
ATR1152G085 Amborella trichopoda HOM05D006586 ORTHO05D008254 2.6e-38 162.5 133 53.4
THA.LOC104821484 Tarenaya hassleriana HOM05D006586 ORTHO05D008254 2.6e-38 162.5 158 51.3
Aa31LG11G590 Aethionema arabicum HOM05D006586 ORTHO05D008254 3.4e-38 162.2 130 56.9
Ah.02g110650 Amaranthus hybridus HOM05D006586 ORTHO05D008254 4.5e-38 161.8 144 54.2
SGA_v2.0_scaffold25G10812 Striga asiatica HOM05D006586 ORTHO05D008254 4.5e-38 161.8 153 52.3
AUR62008177 Chenopodium quinoa HOM05D006586 ORTHO05D008254 1.0e-37 160.6 134 57.5
Psat5g115280 Pisum sativum HOM05D006586 ORTHO05D008254 1.3e-37 160.2 156 53.8
AUR62028758 Chenopodium quinoa HOM05D006586 ORTHO05D008254 6.5e-37 157.9 133 57.1
DCAR_016036 Daucus carota HOM05D006586 ORTHO05D008254 6.5e-37 157.9 134 56.0
AL8G40110 Arabidopsis lyrata HOM05D006586 ORTHO05D008254 8.5e-37 157.5 130 55.4
Lj1g0001085 Lotus japonicus HOM05D006586 ORTHO05D008254 8.5e-37 157.5 136 55.9
Phvul.009G175900 Phaseolus vulgaris HOM05D006586 ORTHO05D008254 1.1e-36 157.1 159 52.8
SHI17138 Sapria himalayana HOM05D006586 ORTHO05D008254 1.9e-36 156.4 133 54.9
Lalb_Chr11g0070371 Lupinus albus HOM05D006586 ORTHO05D008254 7.2e-36 154.5 155 49.7
Medtr3g077420 Medicago truncatula HOM05D006586 ORTHO05D008254 1.6e-35 153.3 154 51.9
Glyma.04G185900 Glycine max HOM05D006586 ORTHO05D008254 4.7e-35 151.8 157 52.2
VMungo1309G1735 Vigna mungo HOM05D006586 ORTHO05D008254 6.1e-35 151.4 156 50.6
unitig_22.g6289 Utricularia gibba HOM05D006586 ORTHO05D008254 1.8e-34 149.8 133 54.1
CDE04G2890 Ceratophyllum demersum HOM05D006586 ORTHO05D008254 3.0e-34 149.1 153 49.0
Sed0000603 Sechium edule HOM05D006586 ORTHO05D008254 9.7e-33 144.1 127 55.1
SEGI_41391 Sequoiadendron giganteum HOM05D006586 ORTHO05D008254 1.3e-32 143.7 156 44.9
TPR.G28722 Trifolium pratense HOM05D006586 ORTHO05D008254 1.3e-32 143.7 156 48.7
Zm00001eb342240 Zea mays HOM05D006586 ORTHO05D008254 2.0e-30 136.3 154 44.8
HanXRQChr11g0348321 Helianthus annuus HOM05D006586 ORTHO05D008254 1.3e-29 133.7 153 43.1
arahy.Tifrunner.gnm1.ann1.Y9SFAP Arachis hypogaea HOM05D006586 ORTHO05D008254 5.0e-29 131.7 158 48.1
arahy.Tifrunner.gnm1.ann1.BDIM58 Arachis hypogaea HOM05D006586 ORTHO05D008254 6.5e-29 131.3 155 47.7
arahy.Tifrunner.gnm1.ann1.DN8DE7 Arachis hypogaea HOM05D006586 ORTHO05D008254 8.5e-29 131.0 131 53.4
Mapoly0108s0029 Marchantia polymorpha HOM05D006586 ORTHO05D008254 9.4e-28 127.5 131 46.6
HPP92_023397 Vanilla planifolia HOM05D006586 ORTHO05D008254 2.7e-27 125.9 86 62.8
AagrBONN_evm.TU.Sc2ySwM_344.3069 Anthoceros agrestis HOM05D006586 ORTHO05D008254 8.8e-26 120.9 134 45.5
SMO141G0010 Selaginella moellendorffii HOM05D006586 ORTHO05D008254 8.8e-26 120.9 128 45.3
vmacro19416 Vaccinium macrocarpon HOM05D006586 ORTHO05D008254 8.5e-21 104.4 70 62.9
CBR_g49886 Chara braunii HOM05D006586 ORTHO05D008254 1.5e-20 103.6 109 39.4
Cpa.g.sc153.15 Carica papaya HOM05D006586 ORTHO05D008254 1.2e-19 100.5 71 63.4
Cpa.g.sc153.14 Carica papaya HOM05D006586 ORTHO05D008254 2.9e-13 79.3 70 57.1
MCO16G527 Micromonas commoda HOM05D006586 ORTHO05D008254 5.4e-07 58.5 145 26.9
Ca_16153_v3 Cicer arietinum L. HOM05D006586 ORTHO05D008254 1.2e-06 57.4 86 39.5


User provided reference genes

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