Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 6.8e-287 989.9 494 100.0
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.6e-278 961.4 493 97.6
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.5e-172 610.1 507 62.3
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 9.2e-167 590.9 503 63.2
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.7e-166 589.3 503 62.2
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.8e-166 587.8 503 62.2
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 2.9e-165 585.9 504 62.3
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 2.9e-165 585.9 503 61.8
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.6e-165 584.7 503 62.6
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.5e-164 582.8 503 61.6
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 7.3e-164 581.3 503 62.4
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.6e-163 578.9 503 61.4
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 3.0e-162 575.9 504 60.1
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 3.4e-161 572.4 502 60.2
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 5.8e-161 571.6 503 61.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.4e-159 567.0 496 60.3
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.3e-157 560.5 500 59.4
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 7.3e-156 554.7 503 57.9
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 7.3e-156 554.7 503 60.0
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 9.5e-156 554.3 506 59.1
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 6.2e-155 551.6 497 58.6
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.8e-154 550.1 498 58.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 3.1e-154 549.3 498 58.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 8.9e-154 547.7 503 57.5
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.5e-153 547.0 504 56.7
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 2.0e-153 546.6 505 57.8
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.1e-151 540.8 502 56.8
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 4.1e-151 538.9 503 57.7
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 3.5e-150 535.8 493 55.4
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 4.6e-150 535.4 505 56.8
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 9.5e-148 527.7 495 55.8
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 9.5e-148 527.7 495 56.0
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 2.1e-147 526.6 505 55.4
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.1e-146 524.2 504 54.0
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 8.9e-146 521.2 505 55.2
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.9e-146 521.2 498 56.0
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 4.4e-145 518.8 499 55.5
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 7.5e-145 518.1 505 55.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 2.4e-143 513.1 502 54.4
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 4.1e-143 512.3 504 55.0
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 4.6e-142 508.8 499 53.5
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 6.8e-138 495.0 502 55.4
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 3.8e-136 489.2 502 55.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.9e-135 486.9 502 54.4
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 7.1e-135 485.0 485 52.6
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 9.2e-135 484.6 487 56.5
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.2e-131 474.2 506 50.8
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.6e-131 472.6 503 51.5
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 2.4e-130 469.9 501 51.5
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.6e-129 466.5 502 50.8
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.3e-128 464.2 498 53.0
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 6.4e-128 461.8 502 50.8
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 6.4e-128 461.8 499 52.1
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 8.4e-128 461.5 494 49.8
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.4e-127 460.7 498 52.8
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.4e-127 460.7 503 50.7
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 5.4e-127 458.8 498 53.2
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 7.1e-127 458.4 511 49.5
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.2e-126 457.6 504 50.8
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.6e-126 457.2 486 51.9
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 6.0e-126 455.3 534 50.0
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 2.1e-123 446.8 501 49.9
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 2.8e-123 446.4 498 51.2
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 4.8e-123 445.7 494 50.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 4.0e-122 442.6 498 52.0
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.0e-121 440.3 405 57.3
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 3.4e-121 439.5 497 51.7
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 3.4e-121 439.5 497 51.7
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.2e-120 436.8 496 51.8
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 2.9e-120 436.4 496 51.4
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.9e-119 433.7 498 51.2
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 2.4e-119 433.3 498 51.4
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 7.1e-119 431.8 496 49.2
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.2e-118 431.0 498 51.2
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.0e-117 427.9 512 48.2
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.8e-115 419.9 514 47.3
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.4e-114 417.5 339 60.8
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 2.0e-113 413.7 505 47.3
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.2e-110 404.4 506 47.0
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.4e-106 390.2 399 54.6
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.2e-105 387.9 496 47.0
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.4e-105 386.3 507 45.0
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 8.4e-104 381.7 503 44.3
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 1.6e-99 367.5 283 66.8
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 8.2e-99 365.2 501 44.3
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.4e-98 364.4 488 46.5
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.2e-97 361.3 267 68.2
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 9.4e-95 351.7 520 41.0
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.6e-94 350.9 487 46.0
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 5.7e-92 342.4 483 46.0
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 5.3e-90 335.9 290 60.0
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 7.9e-86 322.0 374 48.1
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 2.6e-81 307.0 370 46.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 1.3e-80 304.7 325 48.9
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.8e-74 284.3 191 74.3
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 5.7e-68 262.7 309 50.8
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 2.7e-65 253.8 430 40.7
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 5.9e-65 252.7 545 33.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 2.9e-64 250.4 188 66.0
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.8e-61 241.1 357 39.8
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.2e-60 238.4 389 41.1
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.3e-55 220.3 188 58.5
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 4.2e-55 219.9 508 32.7
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 2.4e-50 204.1 152 68.4
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 5.9e-49 199.5 565 29.9
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.5e-47 194.1 334 39.2
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 3.2e-42 177.2 213 44.6
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.6e-38 164.9 129 64.3
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 2.3e-37 161.0 493 28.2
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 9.8e-36 155.6 128 60.9
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.4e-35 152.9 253 38.3
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 9.2e-34 149.1 196 45.4
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 4.4e-28 130.2 144 39.6
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 5.8e-28 129.8 168 43.5
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 8.6e-24 115.9 135 49.6
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 5.1e-16 90.1 55 74.5
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 3.1e-13 80.9 120 40.0
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 7.6e-12 76.3 176 33.5
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 7.1e-10 69.7 70 47.1
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 1.6e-09 68.6 130 36.2
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 7.8e-09 66.2 122 35.2


User provided reference genes

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