Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 4.2e-234 814.3 412 100.0
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 2.1e-233 812.0 412 99.5
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.4e-168 596.7 410 74.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 3.4e-167 592.0 416 72.4
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 7.1e-165 584.3 413 70.9
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 4.6e-164 581.6 413 70.2
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.2e-161 572.8 405 69.9
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 6.3e-161 571.2 412 70.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 6.9e-160 567.8 415 70.8
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 8.5e-158 560.8 414 70.0
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.9e-157 559.7 422 68.5
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 7.7e-151 537.7 416 68.5
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.8e-147 526.6 404 68.3
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 5.1e-147 525.0 397 67.3
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 3.3e-146 522.3 396 66.7
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.7e-145 520.0 416 65.9
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 2.8e-145 519.2 414 66.7
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 6.3e-145 518.1 416 66.6
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 6.3e-145 518.1 416 66.3
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 8.2e-145 517.7 395 68.1
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.1e-144 517.3 416 66.3
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.4e-144 516.9 418 65.6
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.4e-144 516.9 414 65.7
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 2.4e-144 516.2 404 66.3
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 3.1e-144 515.8 403 65.5
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 7.0e-144 514.6 409 67.0
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 9.1e-144 514.2 417 63.5
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 3.5e-143 512.3 417 63.5
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 2.9e-142 509.2 416 63.0
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.1e-141 507.3 414 64.3
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 1.1e-141 507.3 416 63.0
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.1e-141 507.3 404 63.1
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 5.5e-141 505.0 416 62.7
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 1.6e-140 503.4 403 64.5
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.7e-140 502.7 417 62.6
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 6.1e-140 501.5 421 62.9
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 4.0e-139 498.8 397 65.5
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 8.8e-139 497.7 431 62.9
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 8.8e-139 497.7 413 63.2
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.6e-138 496.1 412 65.5
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 2.6e-138 496.1 416 63.0
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 7.5e-138 494.6 416 64.2
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 9.7e-138 494.2 397 64.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 8.2e-137 491.1 417 62.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.8e-136 490.0 397 63.0
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.8e-136 490.0 395 65.3
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.6e-135 486.1 416 62.3
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 3.5e-135 485.7 397 64.7
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 3.5e-135 485.7 379 63.9
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 7.7e-135 484.6 412 62.9
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 3.8e-134 482.3 412 61.9
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.1e-133 480.7 422 61.8
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.5e-133 479.6 415 61.4
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.2e-133 479.2 396 64.6
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 9.4e-133 477.6 416 63.9
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.2e-132 477.2 414 62.1
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.2e-132 477.2 411 63.7
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 1.0e-131 474.2 423 59.3
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 1.2e-130 470.7 397 63.0
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 4.4e-130 468.8 412 60.0
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.7e-130 468.4 403 61.3
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 7.5e-130 468.0 441 59.2
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 8.3e-129 464.5 398 61.8
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 4.1e-128 462.2 414 60.9
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 7.0e-128 461.5 429 58.0
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 1.3e-126 457.2 402 59.2
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 4.2e-125 452.2 414 60.1
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 5.5e-125 451.8 398 59.8
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 9.4e-125 451.1 385 60.3
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.8e-123 446.8 354 66.4
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 3.0e-123 446.0 369 63.1
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 6.8e-123 444.9 409 58.7
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.2e-122 444.1 418 58.1
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 6.3e-121 438.3 403 58.1
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 8.3e-121 438.0 430 56.3
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.1e-120 435.6 339 66.4
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 9.1e-120 434.5 412 57.0
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.5e-117 427.2 466 53.4
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 1.5e-117 427.2 398 57.8
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.9e-117 426.8 379 59.4
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 5.6e-117 425.2 397 58.2
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 2.1e-116 423.3 314 70.4
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 2.8e-116 422.9 428 52.3
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.0e-115 421.0 413 57.6
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.4e-112 408.7 400 54.2
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 3.9e-110 402.5 355 61.7
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 4.6e-103 379.0 364 56.0
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 8.6e-102 374.8 441 50.1
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 6.2e-100 368.6 356 52.8
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.1e-96 357.8 470 44.7
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.1e-94 349.0 363 55.9
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.1e-92 343.6 437 46.0
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.8e-91 338.6 333 57.7
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 8.9e-91 338.2 414 45.2
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 9.9e-90 334.7 327 52.3
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-89 332.4 340 56.2
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.4e-89 331.6 342 55.8
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.1e-87 327.0 205 79.5
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 4.6e-87 325.9 287 62.0
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-86 323.6 301 59.1
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.9e-85 320.5 301 58.8
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.9e-85 320.5 301 58.8
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.9e-85 320.5 301 58.8
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 5.8e-82 308.9 299 54.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.0e-70 271.6 208 67.3
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.2e-66 258.1 274 52.2
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 4.9e-65 252.7 231 58.9
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 2.1e-52 210.7 599 29.7
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.6e-37 160.6 89 86.5
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.3e-33 148.3 181 46.4
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.7e-31 139.8 132 54.5
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 8.2e-28 129.0 202 40.6
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.4e-21 106.7 125 48.8
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.2e-20 104.4 109 50.5
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 2.0e-13 81.3 61 75.4
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 78 66.7
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 78 66.7
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 78 66.7
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 5.5e-08 63.2 47 59.6
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 2.7e-07 60.8 56 55.4


User provided reference genes

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