Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 0.0e+00 1176.8 617 100.0
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 4.0e-204 715.3 592 64.4
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 5.3e-204 714.9 611 65.0
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 1.5e-203 713.4 651 61.9
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 4.4e-203 711.8 594 66.3
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 5.8e-203 711.4 580 66.7
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.7e-202 709.9 627 62.7
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 3.8e-202 708.8 653 61.9
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 4.9e-202 708.4 628 62.9
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.1e-201 707.2 622 62.9
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 4.2e-201 705.3 615 64.7
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 3.0e-199 699.1 631 62.4
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 1.5e-198 696.8 591 64.1
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 9.6e-198 694.1 587 65.1
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 3.6e-197 692.2 586 65.0
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 4.0e-196 688.7 582 63.9
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 4.0e-196 688.7 632 60.9
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 9.0e-196 687.6 592 65.0
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 9.0e-196 687.6 604 63.4
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 1.7e-194 683.3 601 63.2
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 9.3e-193 677.6 592 64.7
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 3.5e-192 675.6 659 58.1
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 6.0e-192 674.9 592 64.4
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.0e-191 674.1 574 65.2
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.3e-191 673.7 644 61.2
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 2.3e-191 672.9 618 60.0
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 3.9e-191 672.2 610 63.1
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 8.7e-191 671.0 600 62.5
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.3e-189 667.2 604 63.9
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 4.8e-189 665.2 599 61.6
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 1.1e-188 664.1 593 63.7
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.8e-188 663.3 575 64.3
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 5.3e-188 661.8 624 59.6
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 7.6e-187 657.9 589 62.5
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 8.4e-186 654.4 640 57.8
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 3.2e-185 652.5 606 59.4
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.6e-184 650.2 597 62.0
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.6e-184 650.2 641 59.3
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 6.0e-184 648.3 599 60.3
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 1.0e-183 647.5 603 60.7
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 5.1e-183 645.2 549 65.2
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.1e-182 644.0 580 61.4
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.5e-182 642.9 578 60.7
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 7.4e-182 641.3 614 58.3
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 7.4e-182 641.3 591 61.1
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.3e-181 640.6 622 56.9
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 3.7e-181 639.0 620 60.5
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 3.7e-181 639.0 603 61.0
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 1.4e-180 637.1 610 60.7
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 1.4e-180 637.1 604 58.3
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.8e-180 636.7 587 61.2
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 3.1e-180 636.0 607 59.1
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 3.1e-180 636.0 646 58.4
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 4.0e-180 635.6 598 59.4
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.4e-179 632.5 581 59.6
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 5.8e-179 631.7 596 59.9
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.7e-178 630.2 598 57.0
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 3.8e-178 629.0 575 60.9
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 8.4e-178 627.9 620 59.5
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 5.5e-177 625.2 588 60.4
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.2e-176 624.0 593 58.0
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 2.1e-176 623.2 545 63.3
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 3.5e-176 622.5 619 57.4
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.3e-175 619.8 600 57.7
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 1.5e-174 617.1 528 64.6
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 5.7e-174 615.1 606 56.4
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 7.7e-171 604.7 563 60.4
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.3e-170 604.0 614 55.9
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.7e-170 603.6 570 58.6
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 2.9e-170 602.8 614 55.9
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 2.9e-170 602.8 598 56.7
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 1.4e-169 600.5 628 55.6
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 6.1e-168 595.1 487 64.3
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.4e-167 594.0 597 56.1
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 6.7e-167 591.7 598 56.5
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 8.8e-167 591.3 655 51.9
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 1.1e-166 590.9 642 54.4
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.5e-166 589.7 649 53.3
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 3.3e-166 589.3 582 57.9
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 9.7e-166 587.8 598 56.7
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.3e-165 587.4 589 56.2
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 2.2e-165 586.6 604 55.0
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 1.1e-164 584.3 599 56.1
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 2.6e-163 579.7 428 70.8
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 4.5e-163 578.9 522 63.6
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 2.1e-160 570.1 617 52.2
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 4.7e-160 568.9 599 53.8
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 7.9e-160 568.2 580 54.8
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 6.7e-159 565.1 601 54.1
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.5e-158 563.9 546 57.7
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 2.0e-158 563.5 579 55.1
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.5e-155 553.9 437 66.8
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.6e-150 536.6 586 52.0
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.3e-149 534.3 565 52.9
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 9.1e-148 528.1 544 55.3
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 2.6e-147 526.6 507 59.2
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 2.0e-142 510.4 560 54.6
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 3.5e-123 446.4 607 44.3
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 2.4e-95 354.0 280 66.1
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 4.8e-80 303.1 645 35.8
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 4.8e-80 303.1 645 35.8
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 6.7e-74 282.7 431 39.9
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.1e-57 228.8 391 35.8
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.9e-37 161.0 193 48.2
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.0e-29 133.7 167 46.1
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.5e-25 122.1 139 53.2
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 6.8e-18 96.7 359 29.2
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 2.4e-15 88.2 207 30.9
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 2.7e-14 84.7 91 51.6
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.1e-12 79.3 131 39.7
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 6.1e-11 73.6 96 43.8
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 8.0e-11 73.2 114 34.2
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 4.4e-09 67.4 51 52.9
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 3.7e-08 64.3 376 26.1
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 9.2e-07 59.7 47 48.9
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 3.5e-06 57.8 199 28.1


User provided reference genes

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