Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 2.8e-114 415.2 203 100.0
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 3.3e-94 348.6 173 99.4
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 3.1e-52 209.1 180 60.6
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 2.6e-51 206.1 174 59.2
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 7.6e-51 204.5 129 72.9
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.3e-50 203.8 129 71.3
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.2e-50 203.0 186 59.7
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 4.9e-50 201.8 190 58.9
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.4e-49 200.3 186 58.1
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 1.4e-49 200.3 176 59.1
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.9e-49 199.9 186 59.1
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.9e-49 199.9 122 74.6
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 5.4e-49 198.4 178 59.0
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 7.1e-49 198.0 118 76.3
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 7.1e-49 198.0 185 60.5
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.6e-48 196.8 184 55.4
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 2.7e-48 196.1 185 60.0
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 2.7e-48 196.1 119 75.6
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.7e-47 193.4 161 59.6
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.7e-47 193.4 163 62.0
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 3.9e-47 192.2 161 59.6
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 3.9e-47 192.2 174 56.3
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.9e-47 192.2 174 56.3
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 6.6e-47 191.4 183 54.1
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 6.6e-47 191.4 183 54.1
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 6.6e-47 191.4 122 71.3
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 6.6e-47 191.4 174 56.3
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 6.6e-47 191.4 187 58.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 8.7e-47 191.0 183 54.1
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 8.7e-47 191.0 183 54.1
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 8.7e-47 191.0 183 55.2
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.7e-47 191.0 174 56.3
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 8.7e-47 191.0 186 57.0
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 8.7e-47 191.0 194 55.2
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.1e-46 190.7 180 56.1
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.1e-46 190.7 189 57.1
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 1.5e-46 190.3 184 57.1
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.5e-46 190.3 161 59.0
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.9e-46 189.9 122 72.1
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 1.9e-46 189.9 183 55.7
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.5e-46 189.5 182 54.9
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 4.3e-46 188.7 174 56.3
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.3e-46 188.7 162 55.6
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 7.3e-46 188.0 121 70.2
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 9.6e-46 187.6 121 70.2
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.6e-45 186.8 187 55.1
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 2.1e-45 186.4 183 53.0
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 2.1e-45 186.4 141 62.4
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 4.8e-45 185.3 123 69.9
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.8e-45 185.3 158 57.6
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 4.8e-45 185.3 173 57.2
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 6.2e-45 184.9 176 54.0
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 6.2e-45 184.9 183 53.6
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.2e-45 184.9 174 53.4
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.1e-44 184.1 122 69.7
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.4e-44 183.7 128 66.4
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.8e-44 183.3 183 53.0
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 6.9e-44 181.4 129 66.7
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 6.9e-44 181.4 154 60.4
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 9.0e-44 181.0 163 58.9
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 9.0e-44 181.0 118 72.0
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 9.0e-44 181.0 121 67.8
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 2.0e-43 179.9 185 49.7
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 3.4e-43 179.1 129 62.0
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.8e-43 178.3 184 57.1
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.8e-43 178.3 184 57.1
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.3e-42 177.2 186 52.2
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 8.4e-42 174.5 106 75.5
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.1e-41 174.1 180 50.6
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.9e-41 173.3 187 50.3
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 2.4e-41 172.9 164 56.7
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 9.3e-41 171.0 117 64.1
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 9.3e-41 171.0 185 50.8
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.3e-39 167.2 122 63.1
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.8e-39 166.8 106 71.7
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.3e-39 166.4 107 72.0
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.3e-39 166.4 106 73.6
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 5.1e-39 165.2 178 55.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 6.7e-39 164.9 177 51.4
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 6.2e-37 158.3 123 57.7
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.4e-36 156.4 116 66.4
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 3.1e-36 156.0 120 59.2
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 4.0e-36 155.6 173 48.0
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.2e-35 154.1 126 57.9
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 7.6e-35 151.4 96 77.1
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.3e-34 150.6 175 46.9
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.7e-34 150.2 112 62.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.2e-34 149.8 159 50.3
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.9e-33 146.7 126 56.3
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 4.6e-32 142.1 149 45.6
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.3e-31 140.6 109 60.6
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 5.1e-31 138.7 88 75.0
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.4e-28 129.8 94 62.8
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.1e-28 129.0 85 72.9
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.1e-28 129.0 85 72.9
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 3.5e-24 115.9 117 47.0
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 6.7e-23 111.7 121 44.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.5e-19 99.0 77 62.3
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.9e-17 93.6 70 61.4
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 3.2e-17 92.8 78 52.6
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.4e-17 91.3 111 46.8
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 2.1e-16 90.1 118 39.8
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.2e-13 80.1 87 49.4
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-11 72.8 135 36.3


User provided reference genes

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