Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 5.6e-63 244.2 131 100.0
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 2.1e-62 242.3 131 99.2
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 2.4e-45 185.7 126 79.4
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 5.8e-44 181.0 130 73.8
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 4.9e-43 177.9 128 74.2
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 6.4e-43 177.6 123 78.0
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.4e-42 176.4 129 70.5
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 5.4e-42 174.5 129 71.3
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 7.1e-42 174.1 126 72.2
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 9.3e-42 173.7 122 77.9
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.2e-41 173.3 124 76.6
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.6e-41 172.9 125 76.0
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 3.5e-41 171.8 126 73.0
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 3.5e-41 171.8 126 73.0
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 3.5e-41 171.8 129 71.3
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 3.5e-41 171.8 130 73.8
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 4.6e-41 171.4 129 71.3
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 6.0e-41 171.0 128 72.7
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 7.8e-41 170.6 129 69.8
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 3.9e-40 168.3 125 73.6
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 3.9e-40 168.3 125 73.6
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 5.1e-40 167.9 116 74.1
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 2.5e-39 165.6 135 69.6
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 3.3e-39 165.2 125 69.6
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 4.3e-39 164.9 118 74.6
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 5.6e-39 164.5 126 68.3
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 5.6e-39 164.5 126 69.8
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 7.3e-39 164.1 128 67.2
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 9.6e-39 163.7 126 69.8
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.3e-38 163.3 128 68.8
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.6e-38 162.9 116 75.0
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.6e-38 162.9 116 75.0
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 3.6e-38 161.8 116 74.1
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 3.6e-38 161.8 126 69.0
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 4.8e-38 161.4 125 68.0
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 8.1e-38 160.6 129 65.9
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.4e-37 159.8 125 69.6
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.4e-37 159.8 118 70.3
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.4e-37 159.8 129 65.1
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.8e-37 159.5 125 68.8
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.8e-37 159.5 118 69.5
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 2.4e-37 159.1 113 73.5
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 2.4e-37 159.1 123 67.5
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 2.4e-37 159.1 125 66.4
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 4.0e-37 158.3 125 68.0
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 5.3e-37 157.9 125 66.4
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 5.3e-37 157.9 118 68.6
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 6.9e-37 157.5 124 67.7
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 1.2e-36 156.8 123 67.5
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 1.2e-36 156.8 120 71.7
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 1.2e-36 156.8 124 67.7
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.5e-36 156.4 129 67.4
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.5e-36 156.4 126 68.3
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 2.0e-36 156.0 118 68.6
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 7.6e-36 154.1 113 69.9
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 7.6e-36 154.1 129 63.6
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 9.9e-36 153.7 126 65.1
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 9.9e-36 153.7 126 65.1
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 9.9e-36 153.7 120 69.2
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 1.7e-35 152.9 118 67.8
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 2.2e-35 152.5 114 69.3
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 2.9e-35 152.1 125 64.8
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 2.9e-35 152.1 125 64.8
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 2.9e-35 152.1 125 64.8
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.9e-35 152.1 122 68.0
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 3.8e-35 151.8 113 70.8
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 6.4e-35 151.0 122 67.2
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.1e-34 150.2 119 66.4
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.9e-34 149.4 113 69.0
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 4.2e-34 148.3 151 58.9
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.2e-33 146.7 123 67.5
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 1.2e-33 146.7 113 68.1
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 6.0e-33 144.4 115 63.5
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 7.9e-33 144.1 118 64.4
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.0e-32 143.7 114 64.0
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.0e-32 143.7 113 67.3
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 1.7e-32 142.9 147 59.2
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 3.9e-32 141.7 116 63.8
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 5.1e-32 141.4 113 65.5
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 6.6e-32 141.0 109 67.9
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 6.6e-32 141.0 127 61.4
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.5e-31 139.8 123 62.6
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.5e-31 139.8 127 61.4
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 2.5e-31 139.0 111 64.0
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 2.5e-31 139.0 127 61.4
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 5.6e-31 137.9 113 65.5
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 1.6e-30 136.3 150 52.7
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-29 133.3 116 61.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 5.3e-29 131.3 116 60.3
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.5e-28 129.8 129 60.5
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 2.0e-28 129.4 118 59.3
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 9.9e-28 127.1 96 70.8
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-27 126.7 81 76.5
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-27 126.7 81 76.5
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.4e-26 122.5 96 69.8
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 9.3e-26 120.6 128 55.5
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.6e-25 119.8 92 71.7
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.6e-25 119.8 92 71.7
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 7.9e-25 117.5 96 68.8
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 4.3e-23 111.7 98 60.2
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 4.3e-23 111.7 111 59.5
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 9.6e-23 110.5 95 63.2
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.6e-22 109.8 125 50.4
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.8e-22 109.0 76 71.1
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.5e-20 103.2 76 67.1
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.2e-19 99.4 78 71.8
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 8.4e-19 97.4 77 67.5
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.1e-18 97.1 87 59.8
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 7.1e-18 94.4 109 47.7
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 5.1e-16 88.2 99 51.5
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.1e-15 87.0 66 68.2
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 1.5e-12 76.6 118 39.8
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 5.5e-10 68.2 90 45.6
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 5.5e-10 68.2 56 60.7
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.8e-08 63.2 78 48.7
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 6.7e-08 61.2 39 74.4


User provided reference genes

Program Settings